RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 MPRIPQ6WCQ1 1025 aa15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 CCDC85AQ96PX6 553 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 IGHDP01880 384 aa15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 CCDC8Q9H0W5 538 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 NAPBQ9H115 298 aa15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 NUCB1Q02818 461 aa15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 DDX19AQ9NUU7 478 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 PRAG1Q86YV5 1406 aa15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 PDCL2Q8N4E4 241 aa15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 SPINK5Q9NQ38 1064 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-205ENST00000450717 SLC5A1P13866 664 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 ABCF2Q9UG63 623 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 SFPQP23246 707 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 RNF41Q9H4P4 317 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 ZNF213O14771 459 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 ZSCAN12O43309 604 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 PTCD1O75127 700 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 TCOF1Q13428 1488 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 PLCH2O75038 1416 aa15.41■□□□□ 0.06
SMARCA4-205ENST00000450717 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 PDCL3Q9H2J4 239 aa15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 HMG20BQ9P0W2 317 aa15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 EIF5P55010 431 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 ZNF397Q8NF99 534 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 MAP3K2Q9Y2U5 619 aa15.4■□□□□ 0.06
SMARCA4-205ENST00000450717 ANKRD18BA2A2Z9 1011 aa15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 RRP9O43818 475 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 ARHGAP29Q52LW3 1261 aa15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 TTC21AQ8NDW8 1320 aa15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 A0A087WZG4 1122 aa15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 TEX13AQ9BXU3 409 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 SSBP05455 408 aaKnown RBP eCLIP15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 SEC63Q9UGP8 760 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 POLR3AO14802 1390 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 TTF1Q15361 905 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 SLC12A7Q9Y666 1083 aa15.39■□□□□ 0.05
SMARCA4-205ENST00000450717 NEMFO60524 1076 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 CCDC148Q8NFR7 591 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 PUS7Q96PZ0 661 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 CTTNBP2Q8WZ74 1663 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 PTPN14Q15678 1187 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 KIAA1328Q86T90 577 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 CTCFLQ8NI51 663 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 ACEP12821 1306 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 STX6O43752 255 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 USP5P45974 858 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 SSRP1Q08945 709 aaKnown RBP15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 BICDL1Q6ZP65 573 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
SMARCA4-205ENST00000450717 GJB2P29033 226 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 IFNL2Q8IZJ0 200 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 UBXN4Q92575 508 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 ZNF76P36508 570 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 IQCA1Q86XH1 822 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 ZSCAN29Q8IWY8 852 aaPredicted RBP15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 KRI1Q8N9T8 703 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 GBP3Q9H0R5 595 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 MCM5P33992 734 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 TSPYL1Q9H0U9 437 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 ATP10BO94823 1461 aa15.37■□□□□ 0.05
SMARCA4-205ENST00000450717 BAG4O95429 457 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 UVSSAQ2YD98 709 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 ANKRD18AQ8IVF6 992 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 GOLGA8BA8MQT2 603 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 PRKCSHP14314 528 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 ZRSR2Q15696 482 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 SKIDA1Q1XH10 827 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 CLIP2Q9UDT6 1046 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 GOLGA8AA7E2F4 631 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 TAF4BQ92750 862 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 MKNK2Q9HBH9 465 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 CWC25Q9NXE8 425 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 NUP153P49790 1475 aaKnown RBP15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 KLHL40Q2TBA0 621 aa15.36■□□□□ 0.05
SMARCA4-205ENST00000450717 CAVIN2O95810 425 aa15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 CFAP43Q8NDM7 1665 aa15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 FAM83GA6ND36 823 aa15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 ZPR1O75312 459 aa15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 KIF18AQ8NI77 898 aa15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 FOXO3O43524 673 aa15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 TOP1P11387 765 aaKnown RBP15.35■□□□□ 0.05
SMARCA4-205ENST00000450717 SYCP2Q9BX26 1530 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 PPP1R12BO60237 982 aaPredicted RBP15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 STX1AQ16623 288 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 FKBP15Q5T1M5 1219 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 PIBF1Q8WXW3 757 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 TMOD2Q9NZR1 351 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 PI4KAP2A4QPH2 592 aa15.34■□□□□ 0.05
SMARCA4-205ENST00000450717 KIAA0754O94854 1291 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms