RNA–Protein interactions for RNA: ENST00000450179.1

TMEM254-206, Transcript of transmembrane protein 254, humanhuman

TSL 3

Gene TMEM254, Length 719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-206ENST00000450179 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 POLR3EQ9NVU0 708 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 SSH2Q76I76 1423 aa8.53□□□□□ -1.04
TMEM254-206ENST00000450179 FAM83GA6ND36 823 aa8.52□□□□□ -1.05
TMEM254-206ENST00000450179 ERCC3P19447 782 aa8.52□□□□□ -1.05
TMEM254-206ENST00000450179 FOXK1P85037 733 aa8.52□□□□□ -1.05
TMEM254-206ENST00000450179 PTGDRQ13258 359 aa8.52□□□□□ -1.05
TMEM254-206ENST00000450179 GJD4Q96KN9 370 aaPredicted RBP8.52□□□□□ -1.05
TMEM254-206ENST00000450179 VRTNQ9H8Y1 702 aa8.52□□□□□ -1.05
TMEM254-206ENST00000450179 PIK3C2AO00443 1686 aa8.52□□□□□ -1.05
TMEM254-206ENST00000450179 LMO7Q8WWI1 1683 aa8.51□□□□□ -1.05
TMEM254-206ENST00000450179 CLK2P49760 499 aaKnown RBP8.51□□□□□ -1.05
TMEM254-206ENST00000450179 MYSM1Q5VVJ2 828 aa8.51□□□□□ -1.05
TMEM254-206ENST00000450179 PPP2R2DQ66LE6 453 aa8.51□□□□□ -1.05
TMEM254-206ENST00000450179 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
TMEM254-206ENST00000450179 USP6P35125 1406 aa8.51□□□□□ -1.05
TMEM254-206ENST00000450179 MON2Q7Z3U7 1717 aa8.51□□□□□ -1.05
TMEM254-206ENST00000450179 BRD4O60885 1362 aaPredicted RBP8.5□□□□□ -1.05
TMEM254-206ENST00000450179 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.5□□□□□ -1.05
TMEM254-206ENST00000450179 POM121CA8CG34 1229 aa8.5□□□□□ -1.05
TMEM254-206ENST00000450179 VPS72Q15906 364 aa8.5□□□□□ -1.05
TMEM254-206ENST00000450179 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
TMEM254-206ENST00000450179 USP19O94966 1318 aa8.5□□□□□ -1.05
TMEM254-206ENST00000450179 EVC2Q86UK5 1308 aa8.5□□□□□ -1.05
TMEM254-206ENST00000450179 SLIT3O75094 1523 aa8.49□□□□□ -1.05
TMEM254-206ENST00000450179 CPSF1Q10570 1443 aaKnown RBP8.49□□□□□ -1.05
TMEM254-206ENST00000450179 PTPN5P54829 565 aa8.49□□□□□ -1.05
TMEM254-206ENST00000450179 CARD11Q9BXL7 1154 aa8.49□□□□□ -1.05
TMEM254-206ENST00000450179 CD163L1Q9NR16 1453 aa8.49□□□□□ -1.05
TMEM254-206ENST00000450179 USP54Q70EL1 1684 aa8.49□□□□□ -1.05
TMEM254-206ENST00000450179 THSD7AQ9UPZ6 1657 aa8.49□□□□□ -1.05
TMEM254-206ENST00000450179 KIAA0232Q92628 1395 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 ABL2P42684 1182 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
TMEM254-206ENST00000450179 NUTM2GQ5VZR2 741 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 B4GALNT3Q6L9W6 998 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 BTG4Q9NY30 223 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 CAMTA1Q9Y6Y1 1673 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 COL18A1P39060 1754 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 CPDO75976 1380 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 ATAD2Q6PL18 1390 aa8.48□□□□□ -1.05
TMEM254-206ENST00000450179 PPM1GO15355 546 aaPredicted RBP8.47□□□□□ -1.05
TMEM254-206ENST00000450179 DIXDC1Q155Q3 683 aa8.47□□□□□ -1.05
TMEM254-206ENST00000450179 ABTB2Q8N961 1025 aa8.47□□□□□ -1.05
TMEM254-206ENST00000450179 TESK2Q96S53 571 aa8.47□□□□□ -1.05
TMEM254-206ENST00000450179 KIAA1522Q9P206 1035 aaPredicted RBP8.47□□□□□ -1.05
TMEM254-206ENST00000450179 PRDM11Q9NQV5 511 aa8.46□□□□□ -1.06
TMEM254-206ENST00000450179 FAM217BQ9NTX9 383 aaPredicted RBP8.46□□□□□ -1.06
TMEM254-206ENST00000450179 VPS9D1Q9Y2B5 631 aa8.46□□□□□ -1.06
TMEM254-206ENST00000450179 SPATA31A5Q5VU36 1347 aa8.46□□□□□ -1.06
TMEM254-206ENST00000450179 SPATA31A7Q8IWB4 1347 aa8.46□□□□□ -1.06
TMEM254-206ENST00000450179 GCP02774 474 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
TMEM254-206ENST00000450179 CHRNA2Q15822 529 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 NLRP13Q86W25 1043 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 SEPT12Q8IYM1 358 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 ZNF454Q8N9F8 522 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 MRRFQ96E11 262 aaKnown RBP8.45□□□□□ -1.06
TMEM254-206ENST00000450179 DRC1Q96MC2 740 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 TTC21BQ7Z4L5 1316 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 CLSPNQ9HAW4 1339 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 RGPD5Q99666 1765 aa8.45□□□□□ -1.06
TMEM254-206ENST00000450179 NFAT5O94916 1531 aa8.44□□□□□ -1.06
TMEM254-206ENST00000450179 ST20-MTHFSA0A0A6YYL1 179 aa8.44□□□□□ -1.06
TMEM254-206ENST00000450179 TMEM88BA6NKF7 163 aa8.44□□□□□ -1.06
TMEM254-206ENST00000450179 RFX1P22670 979 aa8.44□□□□□ -1.06
TMEM254-206ENST00000450179 MAP3K9P80192 1104 aa8.44□□□□□ -1.06
TMEM254-206ENST00000450179 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
TMEM254-206ENST00000450179 KTN1Q86UP2 1357 aaKnown RBP8.44□□□□□ -1.06
TMEM254-206ENST00000450179 COL5A2P05997 1499 aaPredicted RBP8.44□□□□□ -1.06
TMEM254-206ENST00000450179 ATG7O95352 703 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 FAM98CQ17RN3 349 aaKnown RBP8.43□□□□□ -1.06
TMEM254-206ENST00000450179 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
TMEM254-206ENST00000450179 SPATA32Q96LK8 384 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 PCGF6Q9BYE7 350 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 PPP1R12CQ9BZL4 782 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 SPATA31A1Q5TZJ5 1347 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 WNK3Q9BYP7 1800 aa8.43□□□□□ -1.06
TMEM254-206ENST00000450179 TUSC1Q2TAM9 212 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 SLC12A5Q9H2X9 1139 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 A0A1W2PP64 1363 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 AATKQ6ZMQ8 1374 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 USP31Q70CQ4 1352 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 USP47Q96K76 1375 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 MYOM1P52179 1685 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 PARP4Q9UKK3 1724 aaKnown RBP8.42□□□□□ -1.06
TMEM254-206ENST00000450179 LTN1O94822 1766 aa8.42□□□□□ -1.06
TMEM254-206ENST00000450179 TNS1Q9HBL0 1735 aaKnown RBP8.41□□□□□ -1.06
TMEM254-206ENST00000450179 ABCC6O95255 1503 aa8.41□□□□□ -1.06
TMEM254-206ENST00000450179 BLMP54132 1417 aaPredicted RBP8.41□□□□□ -1.06
TMEM254-206ENST00000450179 EDC4Q6P2E9 1401 aaKnown RBP8.41□□□□□ -1.06
TMEM254-206ENST00000450179 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
TMEM254-206ENST00000450179 TCF3P15923 654 aa8.41□□□□□ -1.06
TMEM254-206ENST00000450179 WASHC4Q2M389 1173 aa8.41□□□□□ -1.06
TMEM254-206ENST00000450179 LARP1Q6PKG0 1096 aaKnown RBP8.41□□□□□ -1.06
TMEM254-206ENST00000450179 KRT27Q7Z3Y8 459 aa8.41□□□□□ -1.06
TMEM254-206ENST00000450179 RGPD1P0DJD0 1748 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms