RNA–Protein interactions for RNA: ENST00000449457.1

LINC02561-201, Transcript of long intergenic non-protein coding RNA 2561, humanhuman

TSL 3 BASIC

Gene LINC02561, Length 692 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02561-201ENST00000449457 NCAPD2Q15021 1401 aa13.9□□□□□ -0.19
LINC02561-201ENST00000449457 MYH14Q7Z406 1995 aaKnown RBP13.89□□□□□ -0.19
LINC02561-201ENST00000449457 RASSF7Q02833 373 aa13.89□□□□□ -0.19
LINC02561-201ENST00000449457 CARD14Q9BXL6 1004 aa13.89□□□□□ -0.19
LINC02561-201ENST00000449457 PHKG2P15735 406 aa13.88□□□□□ -0.19
LINC02561-201ENST00000449457 CHRNA5P30532 468 aa13.88□□□□□ -0.19
LINC02561-201ENST00000449457 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
LINC02561-201ENST00000449457 KLRG1Q96E93 195 aa13.88□□□□□ -0.19
LINC02561-201ENST00000449457 EYA1Q99502 592 aa13.88□□□□□ -0.19
LINC02561-201ENST00000449457 ARFGEF1Q9Y6D6 1849 aa13.87□□□□□ -0.19
LINC02561-201ENST00000449457 GYS1P13807 737 aa13.87□□□□□ -0.19
LINC02561-201ENST00000449457 KCNA3P22001 575 aa13.87□□□□□ -0.19
LINC02561-201ENST00000449457 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
LINC02561-201ENST00000449457 NKX1-1Q15270 411 aaPredicted RBP13.87□□□□□ -0.19
LINC02561-201ENST00000449457 RRAGCQ9HB90 399 aa13.87□□□□□ -0.19
LINC02561-201ENST00000449457 RNF181Q9P0P0 153 aa13.87□□□□□ -0.19
LINC02561-201ENST00000449457 TMF1P82094 1093 aa13.86□□□□□ -0.19
LINC02561-201ENST00000449457 C16orf71Q8IYS4 520 aaPredicted RBP13.86□□□□□ -0.19
LINC02561-201ENST00000449457 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
LINC02561-201ENST00000449457 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
LINC02561-201ENST00000449457 STK24Q9Y6E0 443 aa13.86□□□□□ -0.19
LINC02561-201ENST00000449457 TJP1Q07157 1748 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
LINC02561-201ENST00000449457 DDR1Q08345 913 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 TNS4Q8IZW8 715 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 CCDC87Q9NVE4 849 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 PCDHB8Q9UN66 801 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 SPG7Q9UQ90 795 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 PCDHB13Q9Y5F0 798 aa13.85□□□□□ -0.19
LINC02561-201ENST00000449457 TRAPPC3LQ5T215 181 aa13.84□□□□□ -0.19
LINC02561-201ENST00000449457 ZNF467Q7Z7K2 595 aaPredicted RBP13.84□□□□□ -0.19
LINC02561-201ENST00000449457 RBM46Q8TBY0 533 aaKnown RBP13.84□□□□□ -0.19
LINC02561-201ENST00000449457 TNRC6CQ9HCJ0 1690 aaKnown RBP13.84□□□□□ -0.19
LINC02561-201ENST00000449457 SBF1O95248 1867 aa13.83□□□□□ -0.2
LINC02561-201ENST00000449457 PRELPP51888 382 aa13.83□□□□□ -0.2
LINC02561-201ENST00000449457 TGFB2P61812 414 aa13.83□□□□□ -0.2
LINC02561-201ENST00000449457 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
LINC02561-201ENST00000449457 TIAM2Q8IVF5 1701 aa13.82□□□□□ -0.2
LINC02561-201ENST00000449457 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
LINC02561-201ENST00000449457 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
LINC02561-201ENST00000449457 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
LINC02561-201ENST00000449457 RFC4P35249 363 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 JMYQ8N9B5 988 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 DCAF5Q96JK2 942 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 POLR3GLQ9BT43 218 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 ADAMTS7Q9UKP4 1686 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 PLEKHG2Q9H7P9 1386 aa13.81□□□□□ -0.2
LINC02561-201ENST00000449457 HSPA1AP0DMV8 641 aaKnown RBP13.8□□□□□ -0.2
LINC02561-201ENST00000449457 HSPA1BP0DMV9 641 aaKnown RBP13.8□□□□□ -0.2
LINC02561-201ENST00000449457 VSIG10Q8N0Z9 540 aa13.8□□□□□ -0.2
LINC02561-201ENST00000449457 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
LINC02561-201ENST00000449457 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
LINC02561-201ENST00000449457 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
LINC02561-201ENST00000449457 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
LINC02561-201ENST00000449457 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
LINC02561-201ENST00000449457 NLGN1Q8N2Q7 840 aa13.79□□□□□ -0.2
LINC02561-201ENST00000449457 POLKQ9UBT6 870 aa13.79□□□□□ -0.2
LINC02561-201ENST00000449457 KIF24Q5T7B8 1368 aa13.79□□□□□ -0.2
LINC02561-201ENST00000449457 AFDNP55196 1824 aaKnown RBP13.78□□□□□ -0.2
LINC02561-201ENST00000449457 RPS6KA4O75676 772 aa13.78□□□□□ -0.2
LINC02561-201ENST00000449457 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
LINC02561-201ENST00000449457 PIM2Q9P1W9 311 aa13.78□□□□□ -0.2
LINC02561-201ENST00000449457 WASHC2AQ641Q2 1341 aa13.78□□□□□ -0.2
LINC02561-201ENST00000449457 CARMIL3Q8ND23 1372 aa13.78□□□□□ -0.2
LINC02561-201ENST00000449457 ZNF831Q5JPB2 1677 aa13.78□□□□□ -0.2
LINC02561-201ENST00000449457 CCDC88AQ3V6T2 1871 aa13.78□□□□□ -0.2
LINC02561-201ENST00000449457 MAP3K13O43283 966 aa13.77□□□□□ -0.21
LINC02561-201ENST00000449457 KIF12Q96FN5 646 aa13.77□□□□□ -0.21
LINC02561-201ENST00000449457 USP42Q9H9J4 1324 aaKnown RBP13.77□□□□□ -0.21
LINC02561-201ENST00000449457 KDM2BQ8NHM5 1336 aa13.76□□□□□ -0.21
LINC02561-201ENST00000449457 POLRMTO00411 1230 aaKnown RBP13.76□□□□□ -0.21
LINC02561-201ENST00000449457 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
LINC02561-201ENST00000449457 CABP4P57796 275 aa13.76□□□□□ -0.21
LINC02561-201ENST00000449457 FSTL1Q12841 308 aa13.76□□□□□ -0.21
LINC02561-201ENST00000449457 PDAP1Q13442 181 aaKnown RBP13.76□□□□□ -0.21
LINC02561-201ENST00000449457 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
LINC02561-201ENST00000449457 USPL1Q5W0Q7 1092 aa13.75□□□□□ -0.21
LINC02561-201ENST00000449457 IFNL1Q8IU54 200 aa13.75□□□□□ -0.21
LINC02561-201ENST00000449457 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
LINC02561-201ENST00000449457 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
LINC02561-201ENST00000449457 SMC1BQ8NDV3 1235 aa13.74□□□□□ -0.21
LINC02561-201ENST00000449457 DLEC1Q9Y238 1755 aa13.73□□□□□ -0.21
LINC02561-201ENST00000449457 COL11A2P13942 1736 aaPredicted RBP13.73□□□□□ -0.21
LINC02561-201ENST00000449457 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
LINC02561-201ENST00000449457 POTEJP0CG39 1038 aa13.73□□□□□ -0.21
LINC02561-201ENST00000449457 INTS5Q6P9B9 1019 aaKnown RBP13.73□□□□□ -0.21
LINC02561-201ENST00000449457 DNAJC10Q8IXB1 793 aa13.73□□□□□ -0.21
LINC02561-201ENST00000449457 PHF12Q96QT6 1004 aa13.73□□□□□ -0.21
LINC02561-201ENST00000449457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC02561-201ENST00000449457 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
LINC02561-201ENST00000449457 PSEN1P49768 467 aa13.72□□□□□ -0.21
LINC02561-201ENST00000449457 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
LINC02561-201ENST00000449457 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
LINC02561-201ENST00000449457 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
LINC02561-201ENST00000449457 NFKBIEO00221 500 aa13.71□□□□□ -0.21
LINC02561-201ENST00000449457 HMGB2P26583 209 aaKnown RBP13.71□□□□□ -0.21
LINC02561-201ENST00000449457 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
LINC02561-201ENST00000449457 ANKRD31Q8N7Z5 1873 aa13.71□□□□□ -0.21
LINC02561-201ENST00000449457 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms