RNA–Protein interactions for RNA: ENST00000449395.5

PRDM15-208, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 6,662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-208ENST00000449395 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
PRDM15-208ENST00000449395 LRP2BPQ9P2M1 347 aa12.38□□□□□ -0.43
PRDM15-208ENST00000449395 HMGN5P82970 282 aaKnown RBP12.37□□□□□ -0.43
PRDM15-208ENST00000449395 SEPT12Q8IYM1 358 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 DRC1Q96MC2 740 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 TIAM1Q13009 1591 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 KCNA6P17658 529 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 PPP1R42Q7Z4L9 355 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 JAKMIP1Q96N16 626 aaKnown RBP12.37□□□□□ -0.43
PRDM15-208ENST00000449395 STIM1Q13586 685 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 SKIDA1Q1XH10 827 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 PPFIBP1Q86W92 1011 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
PRDM15-208ENST00000449395 NFE2L2Q16236 605 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 TMPOP42166 694 aaKnown RBP12.36□□□□□ -0.43
PRDM15-208ENST00000449395 DCTN1Q14203 1278 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 DHX8Q14562 1220 aaKnown RBP12.36□□□□□ -0.43
PRDM15-208ENST00000449395 NSD3Q9BZ95 1437 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 RPAP2Q8IXW5 612 aaPredicted RBP12.36□□□□□ -0.43
PRDM15-208ENST00000449395 ZSCAN31Q96LW9 406 aaPredicted RBP12.36□□□□□ -0.43
PRDM15-208ENST00000449395 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 H7C1D1 291 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 GRPEL1Q9HAV7 217 aa12.36□□□□□ -0.43
PRDM15-208ENST00000449395 TMEM57Q8N5G2 664 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 SPATA32Q96LK8 384 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 CWC15Q9P013 229 aaKnown RBP12.35□□□□□ -0.43
PRDM15-208ENST00000449395 IQGAP2Q13576 1575 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 CTNNA3Q9UI47 895 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 CDKL5O76039 1030 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 SOGA3Q5TF21 947 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 NIM1KQ8IY84 436 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 CEP126Q9P2H0 1117 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 NOL7Q9UMY1 257 aaKnown RBP12.35□□□□□ -0.43
PRDM15-208ENST00000449395 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 ZHX3Q9H4I2 956 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 ZBTB3Q9H5J0 574 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 CFAP45Q9UL16 551 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 NOD1Q9Y239 953 aa12.35□□□□□ -0.43
PRDM15-208ENST00000449395 GIGYF1O75420 1035 aaPredicted RBP12.35□□□□□ -0.43
PRDM15-208ENST00000449395 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 KRT32Q14532 448 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 DCPSQ96C86 337 aaKnown RBP12.34□□□□□ -0.43
PRDM15-208ENST00000449395 TDO2P48775 406 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 DEF6Q9H4E7 631 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 H0YHG0 523 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 MPNDQ8N594 471 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 ZC3H12CQ9C0D7 883 aaKnown RBP12.34□□□□□ -0.43
PRDM15-208ENST00000449395 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
PRDM15-208ENST00000449395 KDM6BO15054 1643 aa12.34□□□□□ -0.43
PRDM15-208ENST00000449395 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
PRDM15-208ENST00000449395 LRRFIP2Q9Y608 721 aaKnown RBP12.33□□□□□ -0.44
PRDM15-208ENST00000449395 CBFA2T2O43439 604 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 ZNF76P36508 570 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 PRXQ9BXM0 1461 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 SIRT1Q96EB6 747 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 LUC7LQ9NQ29 371 aaKnown RBP12.33□□□□□ -0.44
PRDM15-208ENST00000449395 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
PRDM15-208ENST00000449395 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
PRDM15-208ENST00000449395 MKRN3Q13064 507 aaKnown RBP12.32□□□□□ -0.44
PRDM15-208ENST00000449395 NUP62CLQ9H1M0 184 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 CNGA1P29973 690 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 RBM10P98175 930 aaKnown RBP12.32□□□□□ -0.44
PRDM15-208ENST00000449395 METTL24Q5JXM2 366 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 MCM4P33991 863 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 ORAI2Q96SN7 254 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 MIS18AQ9NYP9 233 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 C11orf95C9JLR9 678 aaPredicted RBP12.32□□□□□ -0.44
PRDM15-208ENST00000449395 EIF4G3O43432 1585 aaKnown RBP12.32□□□□□ -0.44
PRDM15-208ENST00000449395 BICRAQ9NZM4 1560 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
PRDM15-208ENST00000449395 HSP90AB3PQ58FF7 597 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 NLRP3Q96P20 1036 aa12.32□□□□□ -0.44
PRDM15-208ENST00000449395 MPHOSPH6Q99547 160 aaKnown RBP12.32□□□□□ -0.44
PRDM15-208ENST00000449395 RBM17Q96I25 401 aaKnown RBP12.31□□□□□ -0.44
PRDM15-208ENST00000449395 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 ERLIN2O94905 339 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 OTUD7BQ6GQQ9 843 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
PRDM15-208ENST00000449395 DUSP27Q5VZP5 1158 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 CCDC112Q8NEF3 446 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 CABP5Q9NP86 173 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 KIF14Q15058 1648 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 CCDC181Q5TID7 509 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 TPTE2Q6XPS3 522 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 PDCL3Q9H2J4 239 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 FAM177A1Q8N128 213 aaPredicted RBP12.31□□□□□ -0.44
PRDM15-208ENST00000449395 CNBD1Q8NA66 436 aa12.31□□□□□ -0.44
PRDM15-208ENST00000449395 CDK13Q14004 1512 aaKnown RBP12.31□□□□□ -0.44
PRDM15-208ENST00000449395 SLF2Q8IX21 1173 aa12.3□□□□□ -0.44
PRDM15-208ENST00000449395 STK25O00506 426 aa12.3□□□□□ -0.44
PRDM15-208ENST00000449395 IMMTQ16891 758 aaKnown RBP12.3□□□□□ -0.44
PRDM15-208ENST00000449395 LEKR1Q6ZMV7 388 aa12.3□□□□□ -0.44
PRDM15-208ENST00000449395 CEP57L1Q8IYX8 460 aa12.3□□□□□ -0.44
PRDM15-208ENST00000449395 NSFL1CQ9UNZ2 370 aaKnown RBP12.3□□□□□ -0.44
PRDM15-208ENST00000449395 MCM10Q7L590 875 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms