RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 C4AP0C0L4 1744 aa32.93■■■□□ 2.86
UFD1-204ENST00000447868 STARD3NLO95772 234 aa32.92■■■□□ 2.86
UFD1-204ENST00000447868 SYT17Q9BSW7 474 aa32.92■■■□□ 2.86
UFD1-204ENST00000447868 ZBTB1Q9Y2K1 713 aa32.92■■■□□ 2.86
UFD1-204ENST00000447868 TEX13AQ9BXU3 409 aaPredicted RBP32.9■■■□□ 2.86
UFD1-204ENST00000447868 SOS1Q07889 1333 aaPredicted RBP32.89■■■□□ 2.86
UFD1-204ENST00000447868 CANXP27824 592 aaKnown RBP32.89■■■□□ 2.86
UFD1-204ENST00000447868 LMOD3Q0VAK6 560 aa32.88■■■□□ 2.85
UFD1-204ENST00000447868 PNISRQ8TF01 805 aaKnown RBP32.88■■■□□ 2.85
UFD1-204ENST00000447868 SRP68Q9UHB9 627 aaKnown RBP32.87■■■□□ 2.85
UFD1-204ENST00000447868 KDM3BQ7LBC6 1761 aa32.86■■■□□ 2.85
UFD1-204ENST00000447868 PRAMEF22A3QJZ6 481 aa32.85■■■□□ 2.85
UFD1-204ENST00000447868 GYS1P13807 737 aa32.85■■■□□ 2.85
UFD1-204ENST00000447868 MRS2Q9HD23 443 aa32.85■■■□□ 2.85
UFD1-204ENST00000447868 SNRPA1P09661 255 aaKnown RBP32.84■■■□□ 2.85
UFD1-204ENST00000447868 NLGN1Q8N2Q7 840 aa32.84■■■□□ 2.85
UFD1-204ENST00000447868 COL15A1P39059 1388 aa32.83■■■□□ 2.85
UFD1-204ENST00000447868 USP42Q9H9J4 1324 aaKnown RBP32.83■■■□□ 2.85
UFD1-204ENST00000447868 USP16Q9Y5T5 823 aa32.83■■■□□ 2.85
UFD1-204ENST00000447868 A1BGP04217 495 aa32.82■■■□□ 2.84
UFD1-204ENST00000447868 MMP10P09238 476 aa32.82■■■□□ 2.84
UFD1-204ENST00000447868 TRIM35Q9UPQ4 493 aa32.81■■■□□ 2.84
UFD1-204ENST00000447868 ZNF330Q9Y3S2 320 aaPredicted RBP32.81■■■□□ 2.84
UFD1-204ENST00000447868 ZPR1O75312 459 aa32.8■■■□□ 2.84
UFD1-204ENST00000447868 APAF1O14727 1248 aa32.79■■■□□ 2.84
UFD1-204ENST00000447868 TSPYL4Q9UJ04 414 aa32.79■■■□□ 2.84
UFD1-204ENST00000447868 EIF5P55010 431 aaKnown RBP32.78■■■□□ 2.84
UFD1-204ENST00000447868 FKBP8Q14318 412 aa32.78■■■□□ 2.84
UFD1-204ENST00000447868 USPL1Q5W0Q7 1092 aa32.78■■■□□ 2.84
UFD1-204ENST00000447868 NLGN2Q8NFZ4 835 aa32.78■■■□□ 2.84
UFD1-204ENST00000447868 DCAF8L1A6NGE4 600 aa32.77■■■□□ 2.84
UFD1-204ENST00000447868 EIF4A1P60842 406 aaKnown RBP32.77■■■□□ 2.84
UFD1-204ENST00000447868 PIP4K2AP48426 406 aaPredicted RBP32.76■■■□□ 2.83
UFD1-204ENST00000447868 NARFQ9UHQ1 456 aa32.76■■■□□ 2.83
UFD1-204ENST00000447868 A0A087WZG4 1122 aa32.74■■■□□ 2.83
UFD1-204ENST00000447868 IL6STP40189 918 aaPredicted RBP32.74■■■□□ 2.83
UFD1-204ENST00000447868 CD2APQ9Y5K6 639 aa32.74■■■□□ 2.83
UFD1-204ENST00000447868 LAS1LQ9Y4W2 734 aaKnown RBP32.73■■■□□ 2.83
UFD1-204ENST00000447868 PARP3Q9Y6F1 533 aa32.73■■■□□ 2.83
UFD1-204ENST00000447868 LAMB4A4D0S4 1761 aa32.73■■■□□ 2.83
UFD1-204ENST00000447868 GIGYF1O75420 1035 aaPredicted RBP32.72■■■□□ 2.83
UFD1-204ENST00000447868 NPM2Q86SE8 214 aaKnown RBP32.72■■■□□ 2.83
UFD1-204ENST00000447868 BABAM1Q9NWV8 329 aa32.71■■■□□ 2.83
UFD1-204ENST00000447868 TBC1D2BQ9UPU7 963 aa32.7■■■□□ 2.83
UFD1-204ENST00000447868 SENP3-EIF4A1A0A087X0R7 540 aa32.69■■■□□ 2.82
UFD1-204ENST00000447868 BCL2L12Q9HB09 334 aa32.69■■■□□ 2.82
UFD1-204ENST00000447868 PELP1Q8IZL8 1130 aaKnown RBP32.68■■■□□ 2.82
UFD1-204ENST00000447868 NBPF26B4DH59 902 aa32.67■■■□□ 2.82
UFD1-204ENST00000447868 DDR1Q08345 913 aa32.67■■■□□ 2.82
UFD1-204ENST00000447868 NBPF10Q6P3W6 841 aaKnown RBP32.67■■■□□ 2.82
UFD1-204ENST00000447868 NBPF15Q8N660 670 aa32.67■■■□□ 2.82
UFD1-204ENST00000447868 CHL1O00533 1208 aa32.66■■■□□ 2.82
UFD1-204ENST00000447868 TM4SF1P30408 202 aa32.65■■■□□ 2.82
UFD1-204ENST00000447868 SCN7AQ01118 1682 aa32.64■■■□□ 2.82
UFD1-204ENST00000447868 NFIXQ14938 502 aa32.64■■■□□ 2.82
UFD1-204ENST00000447868 GPR162Q16538 588 aa32.64■■■□□ 2.82
UFD1-204ENST00000447868 DZIP3Q86Y13 1208 aaKnown RBP32.64■■■□□ 2.82
UFD1-204ENST00000447868 POLRMTO00411 1230 aaKnown RBP32.63■■■□□ 2.81
UFD1-204ENST00000447868 BICDL1Q6ZP65 573 aa32.62■■■□□ 2.81
UFD1-204ENST00000447868 CAMTA2O94983 1202 aa32.61■■■□□ 2.81
UFD1-204ENST00000447868 FAM9BQ8IZU0 186 aa32.61■■■□□ 2.81
UFD1-204ENST00000447868 KIF13BQ9NQT8 1826 aa32.61■■■□□ 2.81
UFD1-204ENST00000447868 C10orf71Q711Q0 1435 aa32.6■■■□□ 2.81
UFD1-204ENST00000447868 CFAP44Q96MT7 982 aa32.6■■■□□ 2.81
UFD1-204ENST00000447868 EIF2S2P20042 333 aaKnown RBP32.59■■■□□ 2.81
UFD1-204ENST00000447868 KRT24Q2M2I5 525 aa32.59■■■□□ 2.81
UFD1-204ENST00000447868 NGEFQ8N5V2 710 aa32.59■■■□□ 2.81
UFD1-204ENST00000447868 BCORQ6W2J9 1755 aa32.58■■■□□ 2.81
UFD1-204ENST00000447868 CALD1Q05682 793 aaKnown RBP32.58■■■□□ 2.81
UFD1-204ENST00000447868 TBC1D9BQ66K14 1250 aa32.58■■■□□ 2.81
UFD1-204ENST00000447868 WWC3Q9ULE0 1092 aa32.58■■■□□ 2.81
UFD1-204ENST00000447868 MYL6BP14649 208 aa32.57■■■□□ 2.8
UFD1-204ENST00000447868 AFDNP55196 1824 aaKnown RBP32.56■■■□□ 2.8
UFD1-204ENST00000447868 MBIPQ9NS73 344 aa32.56■■■□□ 2.8
UFD1-204ENST00000447868 IFT57Q9NWB7 429 aa32.55■■■□□ 2.8
UFD1-204ENST00000447868 N4BP2Q86UW6 1770 aaPredicted RBP32.55■■■□□ 2.8
UFD1-204ENST00000447868 SERPINB2P05120 415 aa32.54■■■□□ 2.8
UFD1-204ENST00000447868 ZNF853P0CG23 659 aa32.54■■■□□ 2.8
UFD1-204ENST00000447868 YBX3P16989 372 aaKnown RBP eCLIP32.54■■■□□ 2.88e-15■□□□□ 11
UFD1-204ENST00000447868 GNAI1P63096 354 aa32.54■■■□□ 2.8
UFD1-204ENST00000447868 NECTIN2Q92692 538 aa32.54■■■□□ 2.8
UFD1-204ENST00000447868 PXDNLA1KZ92 1463 aa32.54■■■□□ 2.8
UFD1-204ENST00000447868 TGFB2P61812 414 aa32.53■■■□□ 2.8
UFD1-204ENST00000447868 KIAA1551Q9HCM1 1747 aa32.53■■■□□ 2.8
UFD1-204ENST00000447868 A0A0G2JLW4 131 aa32.52■■■□□ 2.8
UFD1-204ENST00000447868 SALL2Q9Y467 1007 aaPredicted RBP32.52■■■□□ 2.8
UFD1-204ENST00000447868 ERBB4Q15303 1308 aa32.51■■■□□ 2.8
UFD1-204ENST00000447868 ZNF652Q9Y2D9 606 aa32.51■■■□□ 2.79
UFD1-204ENST00000447868 NRXN2Q9P2S2 1712 aa32.51■■■□□ 2.79
UFD1-204ENST00000447868 DPEP1P16444 411 aa32.5■■■□□ 2.79
UFD1-204ENST00000447868 CCDC27Q2M243 656 aa32.5■■■□□ 2.79
UFD1-204ENST00000447868 WWC1Q8IX03 1113 aa32.5■■■□□ 2.79
UFD1-204ENST00000447868 SETDB2Q96T68 719 aa32.5■■■□□ 2.79
UFD1-204ENST00000447868 GOLGB1Q14789 3259 aaKnown RBP32.49■■■□□ 2.79
UFD1-204ENST00000447868 CARMIL3Q8ND23 1372 aa32.48■■■□□ 2.79
UFD1-204ENST00000447868 ANXA1P04083 346 aa32.48■■■□□ 2.79
UFD1-204ENST00000447868 PDIA6Q15084 440 aa32.48■■■□□ 2.79
UFD1-204ENST00000447868 CLEC4GQ6UXB4 293 aa32.48■■■□□ 2.79
UFD1-204ENST00000447868 TTLL7Q6ZT98 887 aa32.48■■■□□ 2.79
UFD1-204ENST00000447868 UTRNP46939 3433 aa32.48■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms