RNA–Protein interactions for RNA: ENST00000447782.1

CCDC138-204, Transcript of coiled-coil domain containing 138, humanhuman

TSL 3

Gene CCDC138, Length 539 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138-204ENST00000447782 UBR3Q6ZT12 1888 aa16.24■□□□□ 0.19
CCDC138-204ENST00000447782 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
CCDC138-204ENST00000447782 APAF1O14727 1248 aa16.23■□□□□ 0.19
CCDC138-204ENST00000447782 LMOD3Q0VAK6 560 aa16.23■□□□□ 0.19
CCDC138-204ENST00000447782 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
CCDC138-204ENST00000447782 ZNF790Q6PG37 636 aa16.23■□□□□ 0.19
CCDC138-204ENST00000447782 SMIM5Q71RC9 77 aa16.23■□□□□ 0.19
CCDC138-204ENST00000447782 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
CCDC138-204ENST00000447782 MIS18AQ9NYP9 233 aa16.23■□□□□ 0.19
CCDC138-204ENST00000447782 GNPATO15228 680 aa16.22■□□□□ 0.19
CCDC138-204ENST00000447782 KCNQ3O43525 872 aa16.22■□□□□ 0.19
CCDC138-204ENST00000447782 KCPQ6ZWJ8 1503 aa16.21■□□□□ 0.19
CCDC138-204ENST00000447782 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
CCDC138-204ENST00000447782 DNAJC10Q8IXB1 793 aa16.21■□□□□ 0.19
CCDC138-204ENST00000447782 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
CCDC138-204ENST00000447782 SIPA1L3O60292 1781 aaPredicted RBP16.21■□□□□ 0.18
CCDC138-204ENST00000447782 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
CCDC138-204ENST00000447782 FMNL2Q96PY5 1086 aa16.2■□□□□ 0.18
CCDC138-204ENST00000447782 KIF3CO14782 793 aa16.19■□□□□ 0.18
CCDC138-204ENST00000447782 TGFB2P61812 414 aa16.19■□□□□ 0.18
CCDC138-204ENST00000447782 LAS1LQ9Y4W2 734 aaKnown RBP16.19■□□□□ 0.18
CCDC138-204ENST00000447782 CRKLP46109 303 aaKnown RBP16.18■□□□□ 0.18
CCDC138-204ENST00000447782 TSPYL4Q9UJ04 414 aa16.18■□□□□ 0.18
CCDC138-204ENST00000447782 TRIM35Q9UPQ4 493 aa16.18■□□□□ 0.18
CCDC138-204ENST00000447782 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
CCDC138-204ENST00000447782 TJP1Q07157 1748 aa16.17■□□□□ 0.18
CCDC138-204ENST00000447782 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
CCDC138-204ENST00000447782 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
CCDC138-204ENST00000447782 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
CCDC138-204ENST00000447782 RTCBQ9Y3I0 505 aaKnown RBP16.17■□□□□ 0.18
CCDC138-204ENST00000447782 SALL2Q9Y467 1007 aaPredicted RBP16.17■□□□□ 0.18
CCDC138-204ENST00000447782 ZNF831Q5JPB2 1677 aa16.17■□□□□ 0.18
CCDC138-204ENST00000447782 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
CCDC138-204ENST00000447782 UBR2Q8IWV8 1755 aa16.16■□□□□ 0.18
CCDC138-204ENST00000447782 MMP10P09238 476 aa16.16■□□□□ 0.18
CCDC138-204ENST00000447782 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
CCDC138-204ENST00000447782 C10orf71Q711Q0 1435 aa16.16■□□□□ 0.18
CCDC138-204ENST00000447782 COL5A3P25940 1745 aaPredicted RBP16.16■□□□□ 0.18
CCDC138-204ENST00000447782 STARD3NLO95772 234 aa16.15■□□□□ 0.18
CCDC138-204ENST00000447782 CYP19A1P11511 503 aaPredicted RBP16.15■□□□□ 0.18
CCDC138-204ENST00000447782 CCDC87Q9NVE4 849 aa16.15■□□□□ 0.18
CCDC138-204ENST00000447782 KIF13BQ9NQT8 1826 aa16.15■□□□□ 0.18
CCDC138-204ENST00000447782 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
CCDC138-204ENST00000447782 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
CCDC138-204ENST00000447782 TRAPPC3LQ5T215 181 aa16.14■□□□□ 0.17
CCDC138-204ENST00000447782 INTS5Q6P9B9 1019 aaKnown RBP16.14■□□□□ 0.17
CCDC138-204ENST00000447782 MIER1Q8N108 512 aa16.14■□□□□ 0.17
CCDC138-204ENST00000447782 RNF216Q9NWF9 866 aaPredicted RBP16.14■□□□□ 0.17
CCDC138-204ENST00000447782 ZNF330Q9Y3S2 320 aaPredicted RBP16.14■□□□□ 0.17
CCDC138-204ENST00000447782 RPS6KA4O75676 772 aa16.13■□□□□ 0.17
CCDC138-204ENST00000447782 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
CCDC138-204ENST00000447782 ZNF526Q8TF50 670 aaPredicted RBP16.13■□□□□ 0.17
CCDC138-204ENST00000447782 ZBTB1Q9Y2K1 713 aa16.13■□□□□ 0.17
CCDC138-204ENST00000447782 CCER2I3L3R5 266 aa16.12■□□□□ 0.17
CCDC138-204ENST00000447782 TOMM70O94826 608 aa16.12■□□□□ 0.17
CCDC138-204ENST00000447782 APLP1P51693 650 aa16.12■□□□□ 0.17
CCDC138-204ENST00000447782 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
CCDC138-204ENST00000447782 TEX13AQ9BXU3 409 aaPredicted RBP16.12■□□□□ 0.17
CCDC138-204ENST00000447782 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
CCDC138-204ENST00000447782 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
CCDC138-204ENST00000447782 RFC4P35249 363 aa16.11■□□□□ 0.17
CCDC138-204ENST00000447782 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
CCDC138-204ENST00000447782 EIF4A1P60842 406 aaKnown RBP16.11■□□□□ 0.17
CCDC138-204ENST00000447782 USP16Q9Y5T5 823 aa16.11■□□□□ 0.17
CCDC138-204ENST00000447782 MYH14Q7Z406 1995 aaKnown RBP16.11■□□□□ 0.17
CCDC138-204ENST00000447782 A1BGP04217 495 aa16.1■□□□□ 0.17
CCDC138-204ENST00000447782 GYS1P13807 737 aa16.1■□□□□ 0.17
CCDC138-204ENST00000447782 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
CCDC138-204ENST00000447782 NPM2Q86SE8 214 aaKnown RBP16.09■□□□□ 0.17
CCDC138-204ENST00000447782 DNAJC5GQ8N7S2 189 aa16.09■□□□□ 0.17
CCDC138-204ENST00000447782 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
CCDC138-204ENST00000447782 A0A0G2JLW4 131 aa16.08■□□□□ 0.16
CCDC138-204ENST00000447782 BABAM1Q9NWV8 329 aa16.08■□□□□ 0.16
CCDC138-204ENST00000447782 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.16
CCDC138-204ENST00000447782 WWC3Q9ULE0 1092 aa16.08■□□□□ 0.16
CCDC138-204ENST00000447782 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
CCDC138-204ENST00000447782 COL15A1P39059 1388 aa16.08■□□□□ 0.16
CCDC138-204ENST00000447782 CHL1O00533 1208 aa16.07■□□□□ 0.16
CCDC138-204ENST00000447782 KCNA3P22001 575 aa16.07■□□□□ 0.16
CCDC138-204ENST00000447782 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
CCDC138-204ENST00000447782 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
CCDC138-204ENST00000447782 CFAP44Q96MT7 982 aa16.07■□□□□ 0.16
CCDC138-204ENST00000447782 MBIPQ9NS73 344 aa16.07■□□□□ 0.16
CCDC138-204ENST00000447782 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
CCDC138-204ENST00000447782 ZPR1O75312 459 aa16.06■□□□□ 0.16
CCDC138-204ENST00000447782 DPEP1P16444 411 aa16.06■□□□□ 0.16
CCDC138-204ENST00000447782 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
CCDC138-204ENST00000447782 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
CCDC138-204ENST00000447782 IFT57Q9NWB7 429 aa16.06■□□□□ 0.16
CCDC138-204ENST00000447782 PARP3Q9Y6F1 533 aa16.06■□□□□ 0.16
CCDC138-204ENST00000447782 GNAI1P63096 354 aa16.05■□□□□ 0.16
CCDC138-204ENST00000447782 CCDC27Q2M243 656 aa16.05■□□□□ 0.16
CCDC138-204ENST00000447782 USPL1Q5W0Q7 1092 aa16.05■□□□□ 0.16
CCDC138-204ENST00000447782 NGEFQ8N5V2 710 aa16.05■□□□□ 0.16
CCDC138-204ENST00000447782 NECTIN2Q92692 538 aa16.05■□□□□ 0.16
CCDC138-204ENST00000447782 USP42Q9H9J4 1324 aaKnown RBP16.04■□□□□ 0.16
CCDC138-204ENST00000447782 IL6STP40189 918 aaPredicted RBP16.04■□□□□ 0.16
CCDC138-204ENST00000447782 EIF5P55010 431 aaKnown RBP16.04■□□□□ 0.16
CCDC138-204ENST00000447782 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
CCDC138-204ENST00000447782 TBC1D2BQ9UPU7 963 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms