RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 HOXC9P31274 260 aa23.09■■□□□ 1.29
SDCBP-204ENST00000447182 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
SDCBP-204ENST00000447182 IL25Q9H293 177 aa23.09■■□□□ 1.29
SDCBP-204ENST00000447182 AMOTL2Q9Y2J4 779 aa23.09■■□□□ 1.29
SDCBP-204ENST00000447182 NOL8Q76FK4 1167 aaKnown RBP23.09■■□□□ 1.29
SDCBP-204ENST00000447182 TMEM87AQ8NBN3 555 aa23.09■■□□□ 1.29
SDCBP-204ENST00000447182 MARF1Q9Y4F3 1742 aaKnown RBP23.08■■□□□ 1.29
SDCBP-204ENST00000447182 RAD50Q92878 1312 aa23.08■■□□□ 1.29
SDCBP-204ENST00000447182 PI4K2BQ8TCG2 481 aa23.08■■□□□ 1.29
SDCBP-204ENST00000447182 CSPP1Q1MSJ5 1256 aa23.08■■□□□ 1.28
SDCBP-204ENST00000447182 SLC26A8Q96RN1 970 aa23.08■■□□□ 1.28
SDCBP-204ENST00000447182 IL1RAPL2Q9NP60 686 aa23.08■■□□□ 1.28
SDCBP-204ENST00000447182 SGSM2O43147 1006 aa23.07■■□□□ 1.28
SDCBP-204ENST00000447182 PPP1R42Q7Z4L9 355 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 RHPN1Q8TCX5 695 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 PDCL3Q9H2J4 239 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 TBX22Q9Y458 520 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 NLRP6P59044 892 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 HDGFL1Q5TGJ6 251 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 CRYBG1Q9Y4K1 1723 aa23.06■■□□□ 1.28
SDCBP-204ENST00000447182 NUTM1Q86Y26 1132 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 KIF1BPQ96EK5 621 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 TTC14Q96N46 770 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 EID1Q9Y6B2 187 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 SLIT1O75093 1534 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 RPAP1Q9BWH6 1393 aaPredicted RBP23.05■■□□□ 1.28
SDCBP-204ENST00000447182 ANKARQ7Z5J8 1434 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 SURF6O75683 361 aaKnown RBP23.05■■□□□ 1.28
SDCBP-204ENST00000447182 USP48Q86UV5 1035 aa23.05■■□□□ 1.28
SDCBP-204ENST00000447182 XPCQ01831 940 aaPredicted RBP23.04■■□□□ 1.28
SDCBP-204ENST00000447182 FAM184AQ8NB25 1140 aa23.04■■□□□ 1.28
SDCBP-204ENST00000447182 RNF214Q8ND24 703 aa23.04■■□□□ 1.28
SDCBP-204ENST00000447182 PHAXQ9H814 394 aaKnown RBP23.04■■□□□ 1.28
SDCBP-204ENST00000447182 ARHGAP23Q9P227 1491 aa23.04■■□□□ 1.28
SDCBP-204ENST00000447182 GADD45BO75293 160 aaPredicted RBP23.03■■□□□ 1.28
SDCBP-204ENST00000447182 LSG1Q9H089 658 aaKnown RBP23.03■■□□□ 1.28
SDCBP-204ENST00000447182 SNX14Q9Y5W7 946 aa23.03■■□□□ 1.28
SDCBP-204ENST00000447182 TCHHQ07283 1943 aa23.03■■□□□ 1.28
SDCBP-204ENST00000447182 UVSSAQ2YD98 709 aa23.03■■□□□ 1.28
SDCBP-204ENST00000447182 CNTROBQ8N137 903 aa23.03■■□□□ 1.28
SDCBP-204ENST00000447182 R3HCC1Q9Y3T6 440 aaKnown RBP23.03■■□□□ 1.28
SDCBP-204ENST00000447182 CEMIPQ8WUJ3 1361 aa23.03■■□□□ 1.28
SDCBP-204ENST00000447182 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
SDCBP-204ENST00000447182 HOXB7P09629 217 aa23.02■■□□□ 1.28
SDCBP-204ENST00000447182 MED1Q15648 1581 aaPredicted RBP23.02■■□□□ 1.28
SDCBP-204ENST00000447182 KLHL34Q8N239 644 aa23.02■■□□□ 1.28
SDCBP-204ENST00000447182 CHMP4AQ9BY43 222 aa23.01■■□□□ 1.27
SDCBP-204ENST00000447182 SRGAP3O43295 1099 aa23■■□□□ 1.27
SDCBP-204ENST00000447182 HSP90AB4PQ58FF6 505 aa23■■□□□ 1.27
SDCBP-204ENST00000447182 GDPD2Q9HCC8 539 aa23■■□□□ 1.27
SDCBP-204ENST00000447182 ZSCAN22P10073 491 aaPredicted RBP23■■□□□ 1.27
SDCBP-204ENST00000447182 LIMCH1Q9UPQ0 1083 aa23■■□□□ 1.27
SDCBP-204ENST00000447182 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
SDCBP-204ENST00000447182 CCDC183Q5T5S1 534 aa22.99■■□□□ 1.27
SDCBP-204ENST00000447182 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.99■■□□□ 1.27
SDCBP-204ENST00000447182 TTC41PQ6P2S7 1318 aa22.99■■□□□ 1.27
SDCBP-204ENST00000447182 LETM1O95202 739 aaPredicted RBP22.99■■□□□ 1.27
SDCBP-204ENST00000447182 BEND3Q5T5X7 828 aa22.99■■□□□ 1.27
SDCBP-204ENST00000447182 MAP4K4O95819 1239 aaPredicted RBP22.98■■□□□ 1.27
SDCBP-204ENST00000447182 AK2P54819 239 aa22.98■■□□□ 1.27
SDCBP-204ENST00000447182 KDM3BQ7LBC6 1761 aa22.98■■□□□ 1.27
SDCBP-204ENST00000447182 NBPF7P0C2Y1 421 aaPredicted RBP22.97■■□□□ 1.27
SDCBP-204ENST00000447182 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
SDCBP-204ENST00000447182 RASEFQ8IZ41 740 aa22.97■■□□□ 1.27
SDCBP-204ENST00000447182 RUFY3Q7L099 469 aa22.97■■□□□ 1.27
SDCBP-204ENST00000447182 DNAAF4Q8WXU2 420 aa22.97■■□□□ 1.27
SDCBP-204ENST00000447182 STX6O43752 255 aa22.96■■□□□ 1.27
SDCBP-204ENST00000447182 UBE2HP62256 183 aa22.96■■□□□ 1.27
SDCBP-204ENST00000447182 FOXD4L6Q3SYB3 417 aaPredicted RBP22.96■■□□□ 1.27
SDCBP-204ENST00000447182 FOXD4L3Q6VB84 417 aaPredicted RBP22.96■■□□□ 1.27
SDCBP-204ENST00000447182 GLRX3O76003 335 aaKnown RBP22.96■■□□□ 1.27
SDCBP-204ENST00000447182 SYT1P21579 422 aa22.96■■□□□ 1.27
SDCBP-204ENST00000447182 MTX1Q13505 466 aa22.96■■□□□ 1.27
SDCBP-204ENST00000447182 ATP6V1DQ9Y5K8 247 aa22.96■■□□□ 1.27
SDCBP-204ENST00000447182 PTMAP06454 111 aaKnown RBP22.94■■□□□ 1.26
SDCBP-204ENST00000447182 MAP7D2Q96T17 732 aa22.94■■□□□ 1.26
SDCBP-204ENST00000447182 CNPY2Q9Y2B0 182 aa22.94■■□□□ 1.26
SDCBP-204ENST00000447182 KIAA2012Q0VF49 1180 aa22.94■■□□□ 1.26
SDCBP-204ENST00000447182 RUFY2Q8WXA3 655 aa22.94■■□□□ 1.26
SDCBP-204ENST00000447182 UQCRHLA0A096LP55 91 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 PI4KAP2A4QPH2 592 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 F13A1P00488 732 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 UQCRHP07919 91 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 CWC27Q6UX04 472 aaKnown RBP22.93■■□□□ 1.26
SDCBP-204ENST00000447182 PI4KAP1Q8N8J0 262 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 ABTB2Q8N961 1025 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 CHPF2Q9P2E5 772 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 SMC3Q9UQE7 1217 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.93■■□□□ 1.264e-6■□□□□ 10.9
SDCBP-204ENST00000447182 EIF2S2P20042 333 aaKnown RBP22.93■■□□□ 1.26
SDCBP-204ENST00000447182 SASS6Q6UVJ0 657 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 KCNB2Q92953 911 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 LTV1Q96GA3 475 aaPredicted RBP22.93■■□□□ 1.26
SDCBP-204ENST00000447182 HYPKQ9NX55 129 aa22.93■■□□□ 1.26
SDCBP-204ENST00000447182 DYNC1I1O14576 645 aa22.92■■□□□ 1.26
SDCBP-204ENST00000447182 NUTM2GQ5VZR2 741 aa22.92■■□□□ 1.26
SDCBP-204ENST00000447182 TM6SF1Q9BZW5 370 aa22.92■■□□□ 1.26
SDCBP-204ENST00000447182 LTN1O94822 1766 aa22.92■■□□□ 1.26
SDCBP-204ENST00000447182 VPS53Q5VIR6 699 aa22.91■■□□□ 1.26
SDCBP-204ENST00000447182 SPG7Q9UQ90 795 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms