RNA–Protein interactions for RNA: ENST00000447048.1

RUBCN-205, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-205ENST00000447048 KCNQ4P56696 695 aa12.5□□□□□ -0.41
RUBCN-205ENST00000447048 DNAJC10Q8IXB1 793 aa12.5□□□□□ -0.41
RUBCN-205ENST00000447048 ANO8Q9HCE9 1232 aaPredicted RBP12.5□□□□□ -0.41
RUBCN-205ENST00000447048 SOS1Q07889 1333 aaPredicted RBP12.5□□□□□ -0.41
RUBCN-205ENST00000447048 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
RUBCN-205ENST00000447048 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
RUBCN-205ENST00000447048 STARD3NLO95772 234 aa12.49□□□□□ -0.41
RUBCN-205ENST00000447048 AK7Q96M32 723 aa12.49□□□□□ -0.41
RUBCN-205ENST00000447048 SPINK5Q9NQ38 1064 aaPredicted RBP12.49□□□□□ -0.41
RUBCN-205ENST00000447048 CYP19A1P11511 503 aaPredicted RBP12.48□□□□□ -0.41
RUBCN-205ENST00000447048 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
RUBCN-205ENST00000447048 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
RUBCN-205ENST00000447048 ZNF827Q17R98 1081 aa12.48□□□□□ -0.41
RUBCN-205ENST00000447048 NBPF14Q5TI25 921 aa12.48□□□□□ -0.41
RUBCN-205ENST00000447048 CCDC87Q9NVE4 849 aa12.48□□□□□ -0.41
RUBCN-205ENST00000447048 STK32BQ9NY57 414 aa12.48□□□□□ -0.41
RUBCN-205ENST00000447048 COL15A1P39059 1388 aa12.47□□□□□ -0.41
RUBCN-205ENST00000447048 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
RUBCN-205ENST00000447048 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
RUBCN-205ENST00000447048 KRT24Q2M2I5 525 aa12.47□□□□□ -0.41
RUBCN-205ENST00000447048 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
RUBCN-205ENST00000447048 AKT1S1Q96B36 256 aa12.47□□□□□ -0.41
RUBCN-205ENST00000447048 GNPATO15228 680 aa12.46□□□□□ -0.41
RUBCN-205ENST00000447048 SLC15A2Q16348 729 aa12.46□□□□□ -0.41
RUBCN-205ENST00000447048 CDCA7LQ96GN5 454 aa12.46□□□□□ -0.41
RUBCN-205ENST00000447048 LRP5O75197 1615 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 SSFA2P28290 1259 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
RUBCN-205ENST00000447048 HDGFL1Q5TGJ6 251 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 DUSP27Q5VZP5 1158 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 TRMT2AQ8IZ69 625 aaKnown RBP12.45□□□□□ -0.42
RUBCN-205ENST00000447048 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
RUBCN-205ENST00000447048 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 ZBTB1Q9Y2K1 713 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 USP16Q9Y5T5 823 aa12.45□□□□□ -0.42
RUBCN-205ENST00000447048 ADRA2BP18089 450 aa12.44□□□□□ -0.42
RUBCN-205ENST00000447048 EXOSC9Q06265 439 aaKnown RBP12.44□□□□□ -0.42
RUBCN-205ENST00000447048 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
RUBCN-205ENST00000447048 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
RUBCN-205ENST00000447048 TFCP2L1Q9NZI6 479 aa12.44□□□□□ -0.42
RUBCN-205ENST00000447048 RTCBQ9Y3I0 505 aaKnown RBP12.44□□□□□ -0.42
RUBCN-205ENST00000447048 LAMB2P55268 1798 aa12.43□□□□□ -0.42
RUBCN-205ENST00000447048 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
RUBCN-205ENST00000447048 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
RUBCN-205ENST00000447048 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
RUBCN-205ENST00000447048 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
RUBCN-205ENST00000447048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.42□□□□□ -0.42
RUBCN-205ENST00000447048 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
RUBCN-205ENST00000447048 RPS6KA4O75676 772 aa12.42□□□□□ -0.42
RUBCN-205ENST00000447048 PHF14O94880 888 aa12.42□□□□□ -0.42
RUBCN-205ENST00000447048 A1BGP04217 495 aa12.42□□□□□ -0.42
RUBCN-205ENST00000447048 EIF2S2P20042 333 aaKnown RBP12.42□□□□□ -0.42
RUBCN-205ENST00000447048 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
RUBCN-205ENST00000447048 R3HDM1Q15032 1099 aaKnown RBP12.42□□□□□ -0.42
RUBCN-205ENST00000447048 NBPF26B4DH59 902 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 CT47B1P0C2W7 299 aaPredicted RBP12.41□□□□□ -0.42
RUBCN-205ENST00000447048 CANXP27824 592 aaKnown RBP12.41□□□□□ -0.42
RUBCN-205ENST00000447048 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 NBPF10Q6P3W6 841 aaKnown RBP12.41□□□□□ -0.42
RUBCN-205ENST00000447048 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 NBPF15Q8N660 670 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 CHPF2Q9P2E5 772 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 KIF13BQ9NQT8 1826 aa12.41□□□□□ -0.42
RUBCN-205ENST00000447048 PIP4K2AP48426 406 aaPredicted RBP12.4□□□□□ -0.42
RUBCN-205ENST00000447048 EIF5P55010 431 aaKnown RBP12.4□□□□□ -0.42
RUBCN-205ENST00000447048 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
RUBCN-205ENST00000447048 ZNF428Q96B54 188 aa12.4□□□□□ -0.42
RUBCN-205ENST00000447048 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
RUBCN-205ENST00000447048 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
RUBCN-205ENST00000447048 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.42
RUBCN-205ENST00000447048 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
RUBCN-205ENST00000447048 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
RUBCN-205ENST00000447048 A0A087WZG4 1122 aa12.39□□□□□ -0.43
RUBCN-205ENST00000447048 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
RUBCN-205ENST00000447048 VAMP4O75379 141 aa12.39□□□□□ -0.43
RUBCN-205ENST00000447048 MYL6BP14649 208 aa12.39□□□□□ -0.43
RUBCN-205ENST00000447048 SRCAPQ6ZRS2 3230 aa12.39□□□□□ -0.43
RUBCN-205ENST00000447048 MYH3P11055 1940 aa12.39□□□□□ -0.43
RUBCN-205ENST00000447048 DLEC1Q9Y238 1755 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 RFC4P35249 363 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 PDIA6Q15084 440 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 PROSER3Q2NL68 480 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 TRAPPC3LQ5T215 181 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 LRP10Q7Z4F1 713 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
RUBCN-205ENST00000447048 MSH5O43196 834 aa12.37□□□□□ -0.43
RUBCN-205ENST00000447048 ANXA1P04083 346 aa12.37□□□□□ -0.43
RUBCN-205ENST00000447048 KIF6Q6ZMV9 814 aa12.37□□□□□ -0.43
RUBCN-205ENST00000447048 SMIM5Q71RC9 77 aa12.37□□□□□ -0.43
RUBCN-205ENST00000447048 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
RUBCN-205ENST00000447048 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
RUBCN-205ENST00000447048 ARHGEF1Q92888 912 aaKnown RBP12.37□□□□□ -0.43
RUBCN-205ENST00000447048 PXDNLA1KZ92 1463 aa12.37□□□□□ -0.43
RUBCN-205ENST00000447048 DDX60Q8IY21 1712 aaKnown RBP12.37□□□□□ -0.43
RUBCN-205ENST00000447048 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
RUBCN-205ENST00000447048 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
RUBCN-205ENST00000447048 RGL2O15211 777 aa12.36□□□□□ -0.43
RUBCN-205ENST00000447048 ZPR1O75312 459 aa12.36□□□□□ -0.43
RUBCN-205ENST00000447048 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms