RNA–Protein interactions for RNA: ENST00000446621.1

SFPQP1-201, Transcript of splicing factor proline and glutamine rich pseudogene 1, humanhuman

BASIC

Gene SFPQP1, Length 1,786 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP1-201ENST00000446621 HTATSF1O43719 755 aaKnown RBP17.09■□□□□ 0.33
SFPQP1-201ENST00000446621 CANXP27824 592 aaKnown RBP17.09■□□□□ 0.33
SFPQP1-201ENST00000446621 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
SFPQP1-201ENST00000446621 ZPR1O75312 459 aa17.07■□□□□ 0.32
SFPQP1-201ENST00000446621 NFE2L2Q16236 605 aa17.07■□□□□ 0.32
SFPQP1-201ENST00000446621 COL15A1P39059 1388 aa17.07■□□□□ 0.32
SFPQP1-201ENST00000446621 FKBP8Q14318 412 aa17.07■□□□□ 0.32
SFPQP1-201ENST00000446621 TEX13AQ9BXU3 409 aaPredicted RBP17.07■□□□□ 0.32
SFPQP1-201ENST00000446621 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
SFPQP1-201ENST00000446621 USPL1Q5W0Q7 1092 aa17.06■□□□□ 0.32
SFPQP1-201ENST00000446621 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
SFPQP1-201ENST00000446621 YBX3P16989 372 aaKnown RBP eCLIP17.05■□□□□ 0.32
SFPQP1-201ENST00000446621 PRKRIP1Q9H875 184 aaPredicted RBP17.05■□□□□ 0.32
SFPQP1-201ENST00000446621 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
SFPQP1-201ENST00000446621 CHD4Q14839 1912 aa17.05■□□□□ 0.32
SFPQP1-201ENST00000446621 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
SFPQP1-201ENST00000446621 MIS18AQ9NYP9 233 aa17.05■□□□□ 0.32
SFPQP1-201ENST00000446621 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
SFPQP1-201ENST00000446621 THUMPD2Q9BTF0 503 aaKnown RBP17.04■□□□□ 0.32
SFPQP1-201ENST00000446621 NARFQ9UHQ1 456 aa17.04■□□□□ 0.32
SFPQP1-201ENST00000446621 A1BGP04217 495 aa17.02■□□□□ 0.32
SFPQP1-201ENST00000446621 CCDC146Q8IYE0 955 aa17.02■□□□□ 0.32
SFPQP1-201ENST00000446621 KIF13BQ9NQT8 1826 aa17.02■□□□□ 0.31
SFPQP1-201ENST00000446621 PRAMEF22A3QJZ6 481 aa17.02■□□□□ 0.31
SFPQP1-201ENST00000446621 EIF5P55010 431 aaKnown RBP17.02■□□□□ 0.31
SFPQP1-201ENST00000446621 DDR1Q08345 913 aa17.02■□□□□ 0.31
SFPQP1-201ENST00000446621 C10orf71Q711Q0 1435 aa17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 N4BP2Q86UW6 1770 aaPredicted RBP17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 A0A087WZG4 1122 aa17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 GRIN3BO60391 1043 aa17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 RIPK4P57078 832 aa17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 NPM2Q86SE8 214 aaKnown RBP17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
SFPQP1-201ENST00000446621 TM4SF1P30408 202 aa17■□□□□ 0.31
SFPQP1-201ENST00000446621 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
SFPQP1-201ENST00000446621 PIP4K2AP48426 406 aaPredicted RBP17■□□□□ 0.31
SFPQP1-201ENST00000446621 PNISRQ8TF01 805 aaKnown RBP17■□□□□ 0.31
SFPQP1-201ENST00000446621 TBC1D2BQ9UPU7 963 aa17■□□□□ 0.31
SFPQP1-201ENST00000446621 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
SFPQP1-201ENST00000446621 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 A0A0G2JLW4 131 aa16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 ZNF316A6NFI3 1004 aaPredicted RBP16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 POLRMTO00411 1230 aaKnown RBP16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 TMPOP42166 694 aaKnown RBP16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 NEUROD2Q15784 382 aa16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 KDM3BQ7LBC6 1761 aa16.99■□□□□ 0.31
SFPQP1-201ENST00000446621 KIAA1551Q9HCM1 1747 aa16.98■□□□□ 0.31
SFPQP1-201ENST00000446621 TGFB2P61812 414 aa16.98■□□□□ 0.31
SFPQP1-201ENST00000446621 NFIXQ14938 502 aa16.98■□□□□ 0.31
SFPQP1-201ENST00000446621 ADAMTS8Q9UP79 889 aa16.98■□□□□ 0.31
SFPQP1-201ENST00000446621 BICDL1Q6ZP65 573 aa16.97■□□□□ 0.31
SFPQP1-201ENST00000446621 DPEP1P16444 411 aa16.97■□□□□ 0.31
SFPQP1-201ENST00000446621 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
SFPQP1-201ENST00000446621 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
SFPQP1-201ENST00000446621 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
SFPQP1-201ENST00000446621 AFDNP55196 1824 aaKnown RBP16.96■□□□□ 0.31
SFPQP1-201ENST00000446621 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
SFPQP1-201ENST00000446621 LAMB4A4D0S4 1761 aa16.95■□□□□ 0.3
SFPQP1-201ENST00000446621 DZIP3Q86Y13 1208 aaKnown RBP16.94■□□□□ 0.3
SFPQP1-201ENST00000446621 BCS1LQ9Y276 419 aa16.94■□□□□ 0.3
SFPQP1-201ENST00000446621 SERPINB2P05120 415 aa16.94■□□□□ 0.3
SFPQP1-201ENST00000446621 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
SFPQP1-201ENST00000446621 TBC1D9BQ66K14 1250 aa16.94■□□□□ 0.3
SFPQP1-201ENST00000446621 ZNF784Q8NCA9 323 aaPredicted RBP16.94■□□□□ 0.3
SFPQP1-201ENST00000446621 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
SFPQP1-201ENST00000446621 GIGYF1O75420 1035 aaPredicted RBP16.93■□□□□ 0.3
SFPQP1-201ENST00000446621 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
SFPQP1-201ENST00000446621 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
SFPQP1-201ENST00000446621 BCORQ6W2J9 1755 aa16.92■□□□□ 0.3
SFPQP1-201ENST00000446621 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
SFPQP1-201ENST00000446621 CHRNA5P30532 468 aa16.92■□□□□ 0.3
SFPQP1-201ENST00000446621 NRXN2Q9P2S2 1712 aa16.92■□□□□ 0.3
SFPQP1-201ENST00000446621 BRCA1P38398 1863 aaKnown RBP16.92■□□□□ 0.3
SFPQP1-201ENST00000446621 KCNA3P22001 575 aa16.91■□□□□ 0.3
SFPQP1-201ENST00000446621 LAS1LQ9Y4W2 734 aaKnown RBP16.91■□□□□ 0.3
SFPQP1-201ENST00000446621 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
SFPQP1-201ENST00000446621 SETDB2Q96T68 719 aa16.9■□□□□ 0.3
SFPQP1-201ENST00000446621 PIM2Q9P1W9 311 aa16.9■□□□□ 0.3
SFPQP1-201ENST00000446621 TRIM35Q9UPQ4 493 aa16.9■□□□□ 0.3
SFPQP1-201ENST00000446621 CARMIL3Q8ND23 1372 aa16.9■□□□□ 0.3
SFPQP1-201ENST00000446621 NPHP1O15259 732 aa16.89■□□□□ 0.29
SFPQP1-201ENST00000446621 CCDC184Q52MB2 194 aa16.89■□□□□ 0.29
SFPQP1-201ENST00000446621 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
SFPQP1-201ENST00000446621 ANP32CO43423 234 aa16.88■□□□□ 0.29
SFPQP1-201ENST00000446621 MYL6BP14649 208 aa16.88■□□□□ 0.29
SFPQP1-201ENST00000446621 DALRD3Q5D0E6 543 aaKnown RBP16.88■□□□□ 0.29
SFPQP1-201ENST00000446621 ARHGAP27Q6ZUM4 889 aa16.88■□□□□ 0.29
SFPQP1-201ENST00000446621 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
SFPQP1-201ENST00000446621 BABAM1Q9NWV8 329 aa16.88■□□□□ 0.29
SFPQP1-201ENST00000446621 APAF1O14727 1248 aa16.87■□□□□ 0.29
SFPQP1-201ENST00000446621 EIF2S2P20042 333 aaKnown RBP16.87■□□□□ 0.29
SFPQP1-201ENST00000446621 CLEC4GQ6UXB4 293 aa16.87■□□□□ 0.29
SFPQP1-201ENST00000446621 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
SFPQP1-201ENST00000446621 ARFGEF1Q9Y6D6 1849 aa16.86■□□□□ 0.29
SFPQP1-201ENST00000446621 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
SFPQP1-201ENST00000446621 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
SFPQP1-201ENST00000446621 H0YIN7 160 aa16.85■□□□□ 0.29
SFPQP1-201ENST00000446621 ANKRD31Q8N7Z5 1873 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms