RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 SRP68Q9UHB9 627 aaKnown RBP22.12■■□□□ 1.13
TSPAN9-204ENST00000444315 CD2APQ9Y5K6 639 aa22.12■■□□□ 1.13
TSPAN9-204ENST00000444315 ZBTB1Q9Y2K1 713 aa22.11■■□□□ 1.13
TSPAN9-204ENST00000444315 COL15A1P39059 1388 aa22.11■■□□□ 1.13
TSPAN9-204ENST00000444315 GYS1P13807 737 aa22.1■■□□□ 1.13
TSPAN9-204ENST00000444315 WWC3Q9ULE0 1092 aa22.1■■□□□ 1.13
TSPAN9-204ENST00000444315 SOS1Q07889 1333 aaPredicted RBP22.09■■□□□ 1.13
TSPAN9-204ENST00000444315 USP42Q9H9J4 1324 aaKnown RBP22.09■■□□□ 1.13
TSPAN9-204ENST00000444315 ZNF316A6NFI3 1004 aaPredicted RBP22.08■■□□□ 1.13
TSPAN9-204ENST00000444315 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.13
TSPAN9-204ENST00000444315 USPL1Q5W0Q7 1092 aa22.08■■□□□ 1.13
TSPAN9-204ENST00000444315 CCDC146Q8IYE0 955 aa22.08■■□□□ 1.13
TSPAN9-204ENST00000444315 PRKRIP1Q9H875 184 aaPredicted RBP22.08■■□□□ 1.13
TSPAN9-204ENST00000444315 A0A087WZG4 1122 aa22.07■■□□□ 1.12
TSPAN9-204ENST00000444315 KCNQ3O43525 872 aa22.07■■□□□ 1.12
TSPAN9-204ENST00000444315 LMOD3Q0VAK6 560 aa22.07■■□□□ 1.12
TSPAN9-204ENST00000444315 PNISRQ8TF01 805 aaKnown RBP22.07■■□□□ 1.12
TSPAN9-204ENST00000444315 PLEKHF1Q96S99 279 aa22.07■■□□□ 1.12
TSPAN9-204ENST00000444315 CHD4Q14839 1912 aa22.07■■□□□ 1.12
TSPAN9-204ENST00000444315 RIPK4P57078 832 aa22.06■■□□□ 1.12
TSPAN9-204ENST00000444315 NEUROD2Q15784 382 aa22.06■■□□□ 1.12
TSPAN9-204ENST00000444315 FKBP8Q14318 412 aa22.05■■□□□ 1.12
TSPAN9-204ENST00000444315 MIS18AQ9NYP9 233 aa22.05■■□□□ 1.12
TSPAN9-204ENST00000444315 GRIN3BO60391 1043 aa22.04■■□□□ 1.12
TSPAN9-204ENST00000444315 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
TSPAN9-204ENST00000444315 THUMPD2Q9BTF0 503 aaKnown RBP22.04■■□□□ 1.12
TSPAN9-204ENST00000444315 NPHP1O15259 732 aa22.03■■□□□ 1.12
TSPAN9-204ENST00000444315 NARFQ9UHQ1 456 aa22.03■■□□□ 1.12
TSPAN9-204ENST00000444315 RRP7AQ9Y3A4 280 aaKnown RBP22.03■■□□□ 1.12
TSPAN9-204ENST00000444315 BICDL1Q6ZP65 573 aa22.02■■□□□ 1.12
TSPAN9-204ENST00000444315 A1BGP04217 495 aa22.01■■□□□ 1.11
TSPAN9-204ENST00000444315 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
TSPAN9-204ENST00000444315 ANP32CO43423 234 aa22■■□□□ 1.11
TSPAN9-204ENST00000444315 IL6STP40189 918 aaPredicted RBP22■■□□□ 1.11
TSPAN9-204ENST00000444315 RUNDC1Q96C34 613 aa22■■□□□ 1.11
TSPAN9-204ENST00000444315 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
TSPAN9-204ENST00000444315 TBC1D2BQ9UPU7 963 aa22■■□□□ 1.11
TSPAN9-204ENST00000444315 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
TSPAN9-204ENST00000444315 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
TSPAN9-204ENST00000444315 PIP4K2AP48426 406 aaPredicted RBP21.99■■□□□ 1.11
TSPAN9-204ENST00000444315 LAS1LQ9Y4W2 734 aaKnown RBP21.99■■□□□ 1.11
TSPAN9-204ENST00000444315 LAMB4A4D0S4 1761 aa21.99■■□□□ 1.11
TSPAN9-204ENST00000444315 C10orf71Q711Q0 1435 aa21.98■■□□□ 1.11
TSPAN9-204ENST00000444315 PRAMEF22A3QJZ6 481 aa21.98■■□□□ 1.11
TSPAN9-204ENST00000444315 YBX3P16989 372 aaKnown RBP eCLIP21.98■■□□□ 1.11
TSPAN9-204ENST00000444315 EIF5P55010 431 aaKnown RBP21.98■■□□□ 1.11
TSPAN9-204ENST00000444315 ADAMTS8Q9UP79 889 aa21.98■■□□□ 1.11
TSPAN9-204ENST00000444315 USP16Q9Y5T5 823 aa21.98■■□□□ 1.11
TSPAN9-204ENST00000444315 KIF13BQ9NQT8 1826 aa21.97■■□□□ 1.11
TSPAN9-204ENST00000444315 TGFB2P61812 414 aa21.97■■□□□ 1.11
TSPAN9-204ENST00000444315 DDR1Q08345 913 aa21.97■■□□□ 1.11
TSPAN9-204ENST00000444315 DZIP3Q86Y13 1208 aaKnown RBP21.97■■□□□ 1.11
TSPAN9-204ENST00000444315 SCN7AQ01118 1682 aa21.97■■□□□ 1.11
TSPAN9-204ENST00000444315 A0A0G2JLW4 131 aa21.96■■□□□ 1.11
TSPAN9-204ENST00000444315 BCS1LQ9Y276 419 aa21.96■■□□□ 1.11
TSPAN9-204ENST00000444315 POLRMTO00411 1230 aaKnown RBP21.95■■□□□ 1.1
TSPAN9-204ENST00000444315 NFIXQ14938 502 aa21.95■■□□□ 1.1
TSPAN9-204ENST00000444315 PXDNLA1KZ92 1463 aa21.95■■□□□ 1.1
TSPAN9-204ENST00000444315 NGEFQ8N5V2 710 aa21.94■■□□□ 1.1
TSPAN9-204ENST00000444315 ZNF652Q9Y2D9 606 aa21.94■■□□□ 1.1
TSPAN9-204ENST00000444315 AFDNP55196 1824 aaKnown RBP21.94■■□□□ 1.1
TSPAN9-204ENST00000444315 SERPINB2P05120 415 aa21.93■■□□□ 1.1
TSPAN9-204ENST00000444315 DPEP1P16444 411 aa21.93■■□□□ 1.1
TSPAN9-204ENST00000444315 TM4SF1P30408 202 aa21.92■■□□□ 1.1
TSPAN9-204ENST00000444315 EIF4A1P60842 406 aaKnown RBP21.91■■□□□ 1.1
TSPAN9-204ENST00000444315 TBC1D9BQ66K14 1250 aa21.91■■□□□ 1.1
TSPAN9-204ENST00000444315 SETDB2Q96T68 719 aa21.91■■□□□ 1.1
TSPAN9-204ENST00000444315 BCORQ6W2J9 1755 aa21.91■■□□□ 1.1
TSPAN9-204ENST00000444315 CARMIL3Q8ND23 1372 aa21.9■■□□□ 1.1
TSPAN9-204ENST00000444315 MYL6BP14649 208 aa21.9■■□□□ 1.1
TSPAN9-204ENST00000444315 KIF6Q6ZMV9 814 aa21.9■■□□□ 1.1
TSPAN9-204ENST00000444315 BCL2L12Q9HB09 334 aa21.9■■□□□ 1.1
TSPAN9-204ENST00000444315 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
TSPAN9-204ENST00000444315 EIF2S2P20042 333 aaKnown RBP21.89■■□□□ 1.09
TSPAN9-204ENST00000444315 MRS2Q9HD23 443 aa21.89■■□□□ 1.09
TSPAN9-204ENST00000444315 PIM2Q9P1W9 311 aa21.89■■□□□ 1.09
TSPAN9-204ENST00000444315 KIAA1551Q9HCM1 1747 aa21.89■■□□□ 1.09
TSPAN9-204ENST00000444315 CHRNA5P30532 468 aa21.88■■□□□ 1.09
TSPAN9-204ENST00000444315 ST5P78524 1137 aa21.88■■□□□ 1.09
TSPAN9-204ENST00000444315 GOLGB1Q14789 3259 aaKnown RBP21.88■■□□□ 1.09
TSPAN9-204ENST00000444315 UTRNP46939 3433 aa21.87■■□□□ 1.09
TSPAN9-204ENST00000444315 CAMTA2O94983 1202 aa21.87■■□□□ 1.09
TSPAN9-204ENST00000444315 DALRD3Q5D0E6 543 aaKnown RBP21.87■■□□□ 1.09
TSPAN9-204ENST00000444315 ARHGAP27Q6ZUM4 889 aa21.87■■□□□ 1.09
TSPAN9-204ENST00000444315 CNBD1Q8NA66 436 aa21.87■■□□□ 1.09
TSPAN9-204ENST00000444315 APAF1O14727 1248 aa21.86■■□□□ 1.09
TSPAN9-204ENST00000444315 BABAM1Q9NWV8 329 aa21.86■■□□□ 1.09
TSPAN9-204ENST00000444315 FAM177BA6PVY3 158 aa21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 NBPF26B4DH59 902 aa21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 CALD1Q05682 793 aaKnown RBP21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 NBPF10Q6P3W6 841 aaKnown RBP21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 NBPF5PQ86XG9 351 aaPredicted RBP21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 C2CD5Q86YS7 1000 aa21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 NBPF15Q8N660 670 aa21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 ZNF784Q8NCA9 323 aaPredicted RBP21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 NECTIN2Q92692 538 aa21.85■■□□□ 1.09
TSPAN9-204ENST00000444315 H0YIN7 160 aa21.84■■□□□ 1.09
TSPAN9-204ENST00000444315 GTF2E1P29083 439 aaPredicted RBP21.84■■□□□ 1.09
TSPAN9-204ENST00000444315 CCDC24Q8N4L8 307 aa21.84■■□□□ 1.09
TSPAN9-204ENST00000444315 BRCA1P38398 1863 aaKnown RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms