RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
CDCA4P3-201ENST00000442572 BABAM1Q9NWV8 329 aa16.52■□□□□ 0.24
CDCA4P3-201ENST00000442572 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
CDCA4P3-201ENST00000442572 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
CDCA4P3-201ENST00000442572 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
CDCA4P3-201ENST00000442572 MSL1Q68DK7 614 aa16.49■□□□□ 0.23
CDCA4P3-201ENST00000442572 COL15A1P39059 1388 aa16.49■□□□□ 0.23
CDCA4P3-201ENST00000442572 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 A0A087WZG4 1122 aa16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 KCNQ3O43525 872 aa16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 GYS1P13807 737 aa16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 SMIM5Q71RC9 77 aa16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 ZBTB1Q9Y2K1 713 aa16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 CD2APQ9Y5K6 639 aa16.48■□□□□ 0.23
CDCA4P3-201ENST00000442572 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
CDCA4P3-201ENST00000442572 IL6STP40189 918 aaPredicted RBP16.47■□□□□ 0.23
CDCA4P3-201ENST00000442572 CCDC146Q8IYE0 955 aa16.47■□□□□ 0.23
CDCA4P3-201ENST00000442572 BCORQ6W2J9 1755 aa16.46■□□□□ 0.23
CDCA4P3-201ENST00000442572 ZPR1O75312 459 aa16.46■□□□□ 0.23
CDCA4P3-201ENST00000442572 EIF5P55010 431 aaKnown RBP16.46■□□□□ 0.23
CDCA4P3-201ENST00000442572 NARFQ9UHQ1 456 aa16.46■□□□□ 0.23
CDCA4P3-201ENST00000442572 CHD4Q14839 1912 aa16.46■□□□□ 0.23
CDCA4P3-201ENST00000442572 MMP10P09238 476 aa16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 NPM2Q86SE8 214 aaKnown RBP16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 USP16Q9Y5T5 823 aa16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 AFDNP55196 1824 aaKnown RBP16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 NRXN2Q9P2S2 1712 aa16.44■□□□□ 0.22
CDCA4P3-201ENST00000442572 EIF4A1P60842 406 aaKnown RBP16.43■□□□□ 0.22
CDCA4P3-201ENST00000442572 CALD1Q05682 793 aaKnown RBP16.43■□□□□ 0.22
CDCA4P3-201ENST00000442572 NEUROD2Q15784 382 aa16.43■□□□□ 0.22
CDCA4P3-201ENST00000442572 NCBP3Q53F19 620 aaKnown RBP16.43■□□□□ 0.22
CDCA4P3-201ENST00000442572 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
CDCA4P3-201ENST00000442572 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
CDCA4P3-201ENST00000442572 RGL2O15211 777 aa16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 GIGYF1O75420 1035 aaPredicted RBP16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 A1BGP04217 495 aa16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 CCDC184Q52MB2 194 aa16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 MIS18AQ9NYP9 233 aa16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 SRP68Q9UHB9 627 aaKnown RBP16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 PARP3Q9Y6F1 533 aa16.42■□□□□ 0.22
CDCA4P3-201ENST00000442572 APAF1O14727 1248 aa16.41■□□□□ 0.22
CDCA4P3-201ENST00000442572 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
CDCA4P3-201ENST00000442572 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
CDCA4P3-201ENST00000442572 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
CDCA4P3-201ENST00000442572 ERBB4Q15303 1308 aa16.41■□□□□ 0.22
CDCA4P3-201ENST00000442572 BRCA1P38398 1863 aaKnown RBP16.4■□□□□ 0.22
CDCA4P3-201ENST00000442572 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
CDCA4P3-201ENST00000442572 CHL1O00533 1208 aa16.4■□□□□ 0.22
CDCA4P3-201ENST00000442572 TM4SF1P30408 202 aa16.4■□□□□ 0.22
CDCA4P3-201ENST00000442572 FKBP8Q14318 412 aa16.4■□□□□ 0.22
CDCA4P3-201ENST00000442572 CCDC27Q2M243 656 aa16.39■□□□□ 0.21
CDCA4P3-201ENST00000442572 CFAP44Q96MT7 982 aa16.39■□□□□ 0.21
CDCA4P3-201ENST00000442572 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
CDCA4P3-201ENST00000442572 NUP98P52948 1817 aa16.38■□□□□ 0.21
CDCA4P3-201ENST00000442572 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
CDCA4P3-201ENST00000442572 TGFB2P61812 414 aa16.38■□□□□ 0.21
CDCA4P3-201ENST00000442572 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
CDCA4P3-201ENST00000442572 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
CDCA4P3-201ENST00000442572 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
CDCA4P3-201ENST00000442572 BCL2L12Q9HB09 334 aa16.37■□□□□ 0.21
CDCA4P3-201ENST00000442572 DLEC1Q9Y238 1755 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 NBPF26B4DH59 902 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 HOXB7P09629 217 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 GNAI1P63096 354 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 NBPF10Q6P3W6 841 aaKnown RBP16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 NGEFQ8N5V2 710 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 NBPF15Q8N660 670 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 IFT57Q9NWB7 429 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
CDCA4P3-201ENST00000442572 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
CDCA4P3-201ENST00000442572 CAMTA2O94983 1202 aa16.35■□□□□ 0.21
CDCA4P3-201ENST00000442572 ZNF853P0CG23 659 aa16.35■□□□□ 0.21
CDCA4P3-201ENST00000442572 DDR1Q08345 913 aa16.35■□□□□ 0.21
CDCA4P3-201ENST00000442572 NFIXQ14938 502 aa16.35■□□□□ 0.21
CDCA4P3-201ENST00000442572 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
CDCA4P3-201ENST00000442572 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
CDCA4P3-201ENST00000442572 GPR162Q16538 588 aa16.34■□□□□ 0.21
CDCA4P3-201ENST00000442572 CARMIL3Q8ND23 1372 aa16.34■□□□□ 0.21
CDCA4P3-201ENST00000442572 PXDNLA1KZ92 1463 aa16.34■□□□□ 0.21
CDCA4P3-201ENST00000442572 CHMP4AQ9BY43 222 aa16.33■□□□□ 0.2
CDCA4P3-201ENST00000442572 LAS1LQ9Y4W2 734 aaKnown RBP16.33■□□□□ 0.2
CDCA4P3-201ENST00000442572 CACNA1FO60840 1977 aa16.33■□□□□ 0.2
CDCA4P3-201ENST00000442572 ERVV-1B6SEH8 477 aa16.32■□□□□ 0.2
CDCA4P3-201ENST00000442572 SERPINB2P05120 415 aa16.32■□□□□ 0.2
CDCA4P3-201ENST00000442572 ANKRD36CQ5JPF3 1778 aa16.32■□□□□ 0.2
CDCA4P3-201ENST00000442572 ANKRD31Q8N7Z5 1873 aa16.32■□□□□ 0.2
CDCA4P3-201ENST00000442572 IL16Q14005 1332 aa16.31■□□□□ 0.2
CDCA4P3-201ENST00000442572 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
CDCA4P3-201ENST00000442572 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
CDCA4P3-201ENST00000442572 SETDB2Q96T68 719 aa16.31■□□□□ 0.2
CDCA4P3-201ENST00000442572 MBIPQ9NS73 344 aa16.31■□□□□ 0.2
CDCA4P3-201ENST00000442572 PDZRN3Q9UPQ7 1066 aa16.31■□□□□ 0.2
CDCA4P3-201ENST00000442572 KIF6Q6ZMV9 814 aa16.3■□□□□ 0.2
CDCA4P3-201ENST00000442572 WWC1Q8IX03 1113 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms