RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 ZC3H6P61129 1189 aaKnown RBP5.53□□□□□ -1.52
SCN3A-204ENST00000440431 SKAP1Q86WV1 359 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 TBC1D2BQ9UPU7 963 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 DDX54Q8TDD1 881 aaKnown RBP5.53□□□□□ -1.52
SCN3A-204ENST00000440431 MBIPQ9NS73 344 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-204ENST00000440431 HEG1Q9ULI3 1381 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 TUBGCP6Q96RT7 1819 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 A0A087WZG4 1122 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 CHL1O00533 1208 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
SCN3A-204ENST00000440431 TMOD3Q9NYL9 352 aa5.53□□□□□ -1.52
SCN3A-204ENST00000440431 PTMAP06454 111 aaKnown RBP5.52□□□□□ -1.53
SCN3A-204ENST00000440431 EXOSC9Q06265 439 aaKnown RBP5.52□□□□□ -1.53
SCN3A-204ENST00000440431 KRT24Q2M2I5 525 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 IFNL2Q8IZJ0 200 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 C8orf58Q8NAV2 365 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 IL17REQ8NFR9 667 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 SRCIN1Q9C0H9 1055 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 GNAI2P04899 355 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 TPM4P67936 248 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 TAF7Q15545 349 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-204ENST00000440431 ERICH2A1L162 156 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 SLC3A2P08195 630 aaKnown RBP5.52□□□□□ -1.53
SCN3A-204ENST00000440431 CHAF1AQ13111 956 aaPredicted RBP5.52□□□□□ -1.53
SCN3A-204ENST00000440431 SSH1Q8WYL5 1049 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 GCC1Q96CN9 775 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 COG6Q9Y2V7 657 aa5.52□□□□□ -1.53
SCN3A-204ENST00000440431 COL5A2P05997 1499 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-204ENST00000440431 KDM6AO15550 1401 aaPredicted RBP5.51□□□□□ -1.53
SCN3A-204ENST00000440431 BTBD11A6QL63 1104 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 ZSCAN25Q6NSZ9 544 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 PKNOX2Q96KN3 472 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 MARCH6O60337 910 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 AIMP1Q12904 312 aaKnown RBP5.51□□□□□ -1.53
SCN3A-204ENST00000440431 LARP1Q6PKG0 1096 aaKnown RBP5.51□□□□□ -1.53
SCN3A-204ENST00000440431 RILPL2Q969X0 211 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 CACNA1FO60840 1977 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 ERBB3P21860 1342 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 IGHDP01880 384 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 CCDC158Q5M9N0 1113 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 INTS3Q68E01 1043 aaKnown RBP5.51□□□□□ -1.53
SCN3A-204ENST00000440431 MCM10Q7L590 875 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 USHBP1Q8N6Y0 703 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 IFT57Q9NWB7 429 aa5.51□□□□□ -1.53
SCN3A-204ENST00000440431 FAM161AQ3B820 660 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 CABLES1Q8TDN4 633 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 SLAIN2Q9P270 581 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 ALDH1L2Q3SY69 923 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 RPAP2Q8IXW5 612 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 FMNL2Q96PY5 1086 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 BCL2L13Q9BXK5 485 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 TRIM29Q14134 588 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 CNTROBQ8N137 903 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 MRPL50Q8N5N7 158 aaKnown RBP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 FAM184AQ8NB25 1140 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 IL27Q8NEV9 243 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 OVOS2A0A0G2JMS6 1433 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 SOS1Q07889 1333 aaPredicted RBP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 ITGB4P16144 1822 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 ZPR1O75312 459 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 TRIM27P14373 513 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 SART3Q15020 963 aaKnown RBP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 CCDC57Q2TAC2 916 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 PANK1Q8TE04 598 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 CCDC47Q96A33 483 aaKnown RBP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 MPHOSPH8Q99549 860 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 HYPKQ9NX55 129 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 NOP58Q9Y2X3 529 aaKnown RBP5.5□□□□□ -1.53
SCN3A-204ENST00000440431 PCDHB15Q9Y5E8 787 aa5.5□□□□□ -1.53
SCN3A-204ENST00000440431 SLC4A2P04920 1241 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 APPP05067 770 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 PSMA5P28066 241 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 RALYLQ86SE5 291 aaKnown RBP5.49□□□□□ -1.53
SCN3A-204ENST00000440431 NECTIN2Q92692 538 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 NEUROD6Q96NK8 337 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 CNNM1Q9NRU3 951 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 CEP126Q9P2H0 1117 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 PHLPP1O60346 1717 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 KIAA0232Q92628 1395 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 COL14A1Q05707 1796 aaKnown RBP5.49□□□□□ -1.53
SCN3A-204ENST00000440431 DISP2A7MBM2 1401 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 LGR6Q9HBX8 967 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 SURF6O75683 361 aaKnown RBP5.49□□□□□ -1.53
SCN3A-204ENST00000440431 PHF14O94880 888 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 IGHMBP2P38935 993 aaKnown RBP5.49□□□□□ -1.53
SCN3A-204ENST00000440431 SF3A1Q15459 793 aaKnown RBP5.49□□□□□ -1.53
SCN3A-204ENST00000440431 LAMB4A4D0S4 1761 aa5.49□□□□□ -1.53
SCN3A-204ENST00000440431 KCPQ6ZWJ8 1503 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 CPLX1O14810 134 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 XBP1P17861 261 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 AKAP2Q9Y2D5 859 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 NUP188Q5SRE5 1749 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 ABCC4O15439 1325 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 ADAMTS2O95450 1211 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 PDIA4P13667 645 aaKnown RBP5.48□□□□□ -1.53
SCN3A-204ENST00000440431 KIAA2012Q0VF49 1180 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 ATF7IPQ6VMQ6 1270 aa5.48□□□□□ -1.53
SCN3A-204ENST00000440431 RASSF8Q8NHQ8 419 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms