RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 TGFB2P61812 414 aa9.47□□□□□ -0.89
PTPA-221ENST00000440346 PLEKHO1Q53GL0 409 aaPredicted RBP9.47□□□□□ -0.89
PTPA-221ENST00000440346 ZNF530Q6P9A1 599 aaPredicted RBP9.47□□□□□ -0.89
PTPA-221ENST00000440346 ZBTB12Q9Y330 459 aaPredicted RBP9.47□□□□□ -0.89
PTPA-221ENST00000440346 DLEC1Q9Y238 1755 aa9.46□□□□□ -0.9
PTPA-221ENST00000440346 A0A0G2JLW4 131 aa9.46□□□□□ -0.9
PTPA-221ENST00000440346 U2SURPO15042 1029 aaKnown RBP9.46□□□□□ -0.9
PTPA-221ENST00000440346 FCHSD2O94868 740 aa9.46□□□□□ -0.9
PTPA-221ENST00000440346 CABP4P57796 275 aa9.46□□□□□ -0.9
PTPA-221ENST00000440346 AMOTQ4VCS5 1084 aa9.46□□□□□ -0.9
PTPA-221ENST00000440346 PNNQ9H307 717 aaKnown RBP9.46□□□□□ -0.9
PTPA-221ENST00000440346 CCDC88AQ3V6T2 1871 aa9.46□□□□□ -0.9
PTPA-221ENST00000440346 NRXN2Q9P2S2 1712 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 UBR2Q8IWV8 1755 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 DPEP1P16444 411 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 KCNA3P22001 575 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 RFC4P35249 363 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
PTPA-221ENST00000440346 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 MRS2Q9HD23 443 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 BCS1LQ9Y276 419 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 MRC1P22897 1456 aa9.45□□□□□ -0.9
PTPA-221ENST00000440346 PTCD1O75127 700 aaKnown RBP9.44□□□□□ -0.9
PTPA-221ENST00000440346 U2AF1L5P0DN76 240 aaPredicted RBP9.44□□□□□ -0.9
PTPA-221ENST00000440346 CRKLP46109 303 aaKnown RBP9.44□□□□□ -0.9
PTPA-221ENST00000440346 U2AF1Q01081 240 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPA-221ENST00000440346 NFATC2IPQ8NCF5 419 aa9.44□□□□□ -0.9
PTPA-221ENST00000440346 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
PTPA-221ENST00000440346 SRP68Q9UHB9 627 aaKnown RBP9.44□□□□□ -0.9
PTPA-221ENST00000440346 USP42Q9H9J4 1324 aaKnown RBP9.44□□□□□ -0.9
PTPA-221ENST00000440346 WDR90Q96KV7 1748 aa9.44□□□□□ -0.9
PTPA-221ENST00000440346 HMOX1P09601 288 aa9.43□□□□□ -0.9
PTPA-221ENST00000440346 DDR1Q08345 913 aa9.43□□□□□ -0.9
PTPA-221ENST00000440346 FKBP8Q14318 412 aa9.43□□□□□ -0.9
PTPA-221ENST00000440346 CCDC184Q52MB2 194 aa9.43□□□□□ -0.9
PTPA-221ENST00000440346 C1orf141Q5JVX7 400 aa9.43□□□□□ -0.9
PTPA-221ENST00000440346 INTS5Q6P9B9 1019 aaKnown RBP9.43□□□□□ -0.9
PTPA-221ENST00000440346 PNISRQ8TF01 805 aaKnown RBP9.43□□□□□ -0.9
PTPA-221ENST00000440346 PARP3Q9Y6F1 533 aa9.43□□□□□ -0.9
PTPA-221ENST00000440346 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
PTPA-221ENST00000440346 KCPQ6ZWJ8 1503 aa9.42□□□□□ -0.9
PTPA-221ENST00000440346 NEFMP07197 916 aa9.42□□□□□ -0.9
PTPA-221ENST00000440346 ARHGAP27Q6ZUM4 889 aa9.42□□□□□ -0.9
PTPA-221ENST00000440346 MIER1Q8N108 512 aa9.42□□□□□ -0.9
PTPA-221ENST00000440346 ANKRD31Q8N7Z5 1873 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 TOMM70O94826 608 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 PRKAR2BP31323 418 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 PLEKHF1Q96S99 279 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 NMRK2Q9NPI5 230 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 ADAMTS8Q9UP79 889 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
PTPA-221ENST00000440346 SOS1Q07889 1333 aaPredicted RBP9.4□□□□□ -0.9
PTPA-221ENST00000440346 MAPK8IP3Q9UPT6 1336 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 POLRMTO00411 1230 aaKnown RBP9.4□□□□□ -0.9
PTPA-221ENST00000440346 TM4SF1P30408 202 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 AKAP4Q5JQC9 854 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 C9orf131Q5VYM1 1079 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 DNAJC10Q8IXB1 793 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 GAS2L2Q8NHY3 880 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 RUNDC1Q96C34 613 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 PIM2Q9P1W9 311 aa9.4□□□□□ -0.9
PTPA-221ENST00000440346 DICER1Q9UPY3 1922 aaKnown RBP9.4□□□□□ -0.9
PTPA-221ENST00000440346 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
PTPA-221ENST00000440346 CYP19A1P11511 503 aaPredicted RBP9.39□□□□□ -0.91
PTPA-221ENST00000440346 CHRNA5P30532 468 aa9.39□□□□□ -0.91
PTPA-221ENST00000440346 APLP1P51693 650 aa9.39□□□□□ -0.91
PTPA-221ENST00000440346 DALRD3Q5D0E6 543 aaKnown RBP9.39□□□□□ -0.91
PTPA-221ENST00000440346 DNAJC5GQ8N7S2 189 aa9.39□□□□□ -0.91
PTPA-221ENST00000440346 PCNTO95613 3336 aa9.39□□□□□ -0.91
PTPA-221ENST00000440346 SCN7AQ01118 1682 aa9.39□□□□□ -0.91
PTPA-221ENST00000440346 CACNA1FO60840 1977 aa9.38□□□□□ -0.91
PTPA-221ENST00000440346 RNMTO43148 476 aaKnown RBP9.38□□□□□ -0.91
PTPA-221ENST00000440346 SLC39A6Q13433 755 aa9.38□□□□□ -0.91
PTPA-221ENST00000440346 MTHFSDQ2M296 383 aaKnown RBP9.38□□□□□ -0.91
PTPA-221ENST00000440346 USPL1Q5W0Q7 1092 aa9.38□□□□□ -0.91
PTPA-221ENST00000440346 PHACTR3Q96KR7 559 aa9.38□□□□□ -0.91
PTPA-221ENST00000440346 COL11A2P13942 1736 aaPredicted RBP9.38□□□□□ -0.91
PTPA-221ENST00000440346 CACNA1SQ13698 1873 aa9.38□□□□□ -0.91
PTPA-221ENST00000440346 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
PTPA-221ENST00000440346 COL15A1P39059 1388 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 GNAT3A8MTJ3 354 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
PTPA-221ENST00000440346 NFIXQ14938 502 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
PTPA-221ENST00000440346 BCL2L12Q9HB09 334 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
PTPA-221ENST00000440346 ZPR1O75312 459 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 NFE2L2Q16236 605 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 NGEFQ8N5V2 710 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 RNF181Q9P0P0 153 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 BCORQ6W2J9 1755 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 CARMIL3Q8ND23 1372 aa9.36□□□□□ -0.91
PTPA-221ENST00000440346 CEMIPQ8WUJ3 1361 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms