RNA–Protein interactions for RNA: ENST00000440223.5

UBE2F-214, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 830 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-214ENST00000440223 COL23A1Q86Y22 540 aaPredicted RBP20.74■□□□□ 0.91
UBE2F-214ENST00000440223 TRMT2AQ8IZ69 625 aaKnown RBP20.74■□□□□ 0.91
UBE2F-214ENST00000440223 MYH14Q7Z406 1995 aaKnown RBP20.74■□□□□ 0.91
UBE2F-214ENST00000440223 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
UBE2F-214ENST00000440223 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
UBE2F-214ENST00000440223 KDM3BQ7LBC6 1761 aa20.72■□□□□ 0.91
UBE2F-214ENST00000440223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.72■□□□□ 0.91
UBE2F-214ENST00000440223 CRKLP46109 303 aaKnown RBP20.72■□□□□ 0.91
UBE2F-214ENST00000440223 FMNL2Q96PY5 1086 aa20.72■□□□□ 0.91
UBE2F-214ENST00000440223 HEG1Q9ULI3 1381 aa20.72■□□□□ 0.91
UBE2F-214ENST00000440223 DNAJC10Q8IXB1 793 aa20.71■□□□□ 0.91
UBE2F-214ENST00000440223 C4AP0C0L4 1744 aa20.7■□□□□ 0.9
UBE2F-214ENST00000440223 RPS6KA4O75676 772 aa20.7■□□□□ 0.9
UBE2F-214ENST00000440223 NEFLP07196 543 aa20.7■□□□□ 0.9
UBE2F-214ENST00000440223 ADRA2BP18089 450 aa20.7■□□□□ 0.9
UBE2F-214ENST00000440223 POLD1P28340 1107 aa20.7■□□□□ 0.9
UBE2F-214ENST00000440223 PTGER2P43116 358 aa20.7■□□□□ 0.9
UBE2F-214ENST00000440223 TAF7Q15545 349 aaPredicted RBP20.7■□□□□ 0.9
UBE2F-214ENST00000440223 ZNF496Q96IT1 587 aaPredicted RBP20.7■□□□□ 0.9
UBE2F-214ENST00000440223 LAS1LQ9Y4W2 734 aaKnown RBP20.7■□□□□ 0.9
UBE2F-214ENST00000440223 AMIGO3Q86WK7 504 aa20.69■□□□□ 0.9
UBE2F-214ENST00000440223 TEX13AQ9BXU3 409 aaPredicted RBP20.69■□□□□ 0.9
UBE2F-214ENST00000440223 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
UBE2F-214ENST00000440223 CCDC87Q9NVE4 849 aa20.69■□□□□ 0.9
UBE2F-214ENST00000440223 RCAN3Q9UKA8 241 aa20.69■□□□□ 0.9
UBE2F-214ENST00000440223 FANCIQ9NVI1 1328 aa20.69■□□□□ 0.9
UBE2F-214ENST00000440223 TRAPPC3LQ5T215 181 aa20.68■□□□□ 0.9
UBE2F-214ENST00000440223 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
UBE2F-214ENST00000440223 SGIP1Q9BQI5 828 aa20.68■□□□□ 0.9
UBE2F-214ENST00000440223 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
UBE2F-214ENST00000440223 STARD3NLO95772 234 aa20.67■□□□□ 0.9
UBE2F-214ENST00000440223 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
UBE2F-214ENST00000440223 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
UBE2F-214ENST00000440223 LAMB4A4D0S4 1761 aa20.67■□□□□ 0.9
UBE2F-214ENST00000440223 SMIM5Q71RC9 77 aa20.66■□□□□ 0.9
UBE2F-214ENST00000440223 KCNQ3O43525 872 aa20.65■□□□□ 0.9
UBE2F-214ENST00000440223 INTS5Q6P9B9 1019 aaKnown RBP20.65■□□□□ 0.9
UBE2F-214ENST00000440223 ARXQ96QS3 562 aa20.65■□□□□ 0.9
UBE2F-214ENST00000440223 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
UBE2F-214ENST00000440223 RFC4P35249 363 aa20.64■□□□□ 0.89
UBE2F-214ENST00000440223 MSL1Q68DK7 614 aa20.64■□□□□ 0.89
UBE2F-214ENST00000440223 ARHGEF1Q92888 912 aaKnown RBP20.64■□□□□ 0.89
UBE2F-214ENST00000440223 TSR2Q969E8 191 aaKnown RBP20.64■□□□□ 0.89
UBE2F-214ENST00000440223 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.89
UBE2F-214ENST00000440223 SUPT16HQ9Y5B9 1047 aaKnown RBP20.64■□□□□ 0.89
UBE2F-214ENST00000440223 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
UBE2F-214ENST00000440223 SNRPA1P09661 255 aaKnown RBP20.62■□□□□ 0.89
UBE2F-214ENST00000440223 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
UBE2F-214ENST00000440223 MIS18AQ9NYP9 233 aa20.62■□□□□ 0.89
UBE2F-214ENST00000440223 ZBTB1Q9Y2K1 713 aa20.62■□□□□ 0.89
UBE2F-214ENST00000440223 CACNA1FO60840 1977 aa20.62■□□□□ 0.89
UBE2F-214ENST00000440223 COL15A1P39059 1388 aa20.61■□□□□ 0.89
UBE2F-214ENST00000440223 TSPYL4Q9UJ04 414 aa20.61■□□□□ 0.89
UBE2F-214ENST00000440223 CHL1O00533 1208 aa20.6■□□□□ 0.89
UBE2F-214ENST00000440223 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
UBE2F-214ENST00000440223 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.6■□□□□ 0.89
UBE2F-214ENST00000440223 CANXP27824 592 aaKnown RBP20.59■□□□□ 0.89
UBE2F-214ENST00000440223 USP42Q9H9J4 1324 aaKnown RBP20.58■□□□□ 0.89
UBE2F-214ENST00000440223 NPM2Q86SE8 214 aaKnown RBP20.58■□□□□ 0.89
UBE2F-214ENST00000440223 NLGN1Q8N2Q7 840 aa20.58■□□□□ 0.89
UBE2F-214ENST00000440223 ZNF428Q96B54 188 aa20.58■□□□□ 0.89
UBE2F-214ENST00000440223 FHDC1Q9C0D6 1143 aaPredicted RBP20.58■□□□□ 0.89
UBE2F-214ENST00000440223 ZPR1O75312 459 aa20.57■□□□□ 0.88
UBE2F-214ENST00000440223 EIF4A1P60842 406 aaKnown RBP20.57■□□□□ 0.88
UBE2F-214ENST00000440223 SCN7AQ01118 1682 aa20.57■□□□□ 0.88
UBE2F-214ENST00000440223 A0A087WZG4 1122 aa20.56■□□□□ 0.88
UBE2F-214ENST00000440223 GYS1P13807 737 aa20.56■□□□□ 0.88
UBE2F-214ENST00000440223 IL6STP40189 918 aaPredicted RBP20.56■□□□□ 0.88
UBE2F-214ENST00000440223 KLHL34Q8N239 644 aa20.56■□□□□ 0.88
UBE2F-214ENST00000440223 USP16Q9Y5T5 823 aa20.56■□□□□ 0.88
UBE2F-214ENST00000440223 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
UBE2F-214ENST00000440223 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
UBE2F-214ENST00000440223 RRP1P56182 461 aaKnown RBP20.55■□□□□ 0.88
UBE2F-214ENST00000440223 SRP68Q9UHB9 627 aaKnown RBP20.55■□□□□ 0.88
UBE2F-214ENST00000440223 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
UBE2F-214ENST00000440223 RNF123Q5XPI4 1314 aa20.54■□□□□ 0.88
UBE2F-214ENST00000440223 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
UBE2F-214ENST00000440223 A1BGP04217 495 aa20.54■□□□□ 0.88
UBE2F-214ENST00000440223 SYT17Q9BSW7 474 aa20.54■□□□□ 0.88
UBE2F-214ENST00000440223 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
UBE2F-214ENST00000440223 MMP10P09238 476 aa20.53■□□□□ 0.88
UBE2F-214ENST00000440223 TWISTNBQ3B726 338 aaPredicted RBP20.53■□□□□ 0.88
UBE2F-214ENST00000440223 BCORQ6W2J9 1755 aa20.53■□□□□ 0.88
UBE2F-214ENST00000440223 USPL1Q5W0Q7 1092 aa20.52■□□□□ 0.88
UBE2F-214ENST00000440223 CHMP4AQ9BY43 222 aa20.52■□□□□ 0.88
UBE2F-214ENST00000440223 GTF3C3Q9Y5Q9 886 aa20.52■□□□□ 0.88
UBE2F-214ENST00000440223 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
UBE2F-214ENST00000440223 RARSP54136 660 aaKnown RBP20.51■□□□□ 0.87
UBE2F-214ENST00000440223 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
UBE2F-214ENST00000440223 PARP3Q9Y6F1 533 aa20.51■□□□□ 0.87
UBE2F-214ENST00000440223 FKBP8Q14318 412 aa20.5■□□□□ 0.87
UBE2F-214ENST00000440223 SMC4Q9NTJ3 1288 aa20.5■□□□□ 0.87
UBE2F-214ENST00000440223 KIF13BQ9NQT8 1826 aa20.49■□□□□ 0.87
UBE2F-214ENST00000440223 CD2APQ9Y5K6 639 aa20.49■□□□□ 0.87
UBE2F-214ENST00000440223 ERBB4Q15303 1308 aa20.49■□□□□ 0.87
UBE2F-214ENST00000440223 PIP4K2AP48426 406 aaPredicted RBP20.48■□□□□ 0.87
UBE2F-214ENST00000440223 KIF16BQ96L93 1317 aa20.48■□□□□ 0.87
UBE2F-214ENST00000440223 VAMP4O75379 141 aa20.47■□□□□ 0.87
UBE2F-214ENST00000440223 DZIP3Q86Y13 1208 aaKnown RBP20.47■□□□□ 0.87
UBE2F-214ENST00000440223 C8orf58Q8NAV2 365 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms