RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 PPP4R2Q9NY27 417 aa18.8■□□□□ 0.6
TNFRSF1A-204ENST00000440083 GNPATO15228 680 aa18.79■□□□□ 0.6
TNFRSF1A-204ENST00000440083 FMNL2Q96PY5 1086 aa18.79■□□□□ 0.6
TNFRSF1A-204ENST00000440083 TSPYL4Q9UJ04 414 aa18.79■□□□□ 0.6
TNFRSF1A-204ENST00000440083 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1A-204ENST00000440083 CNTNAP4Q9C0A0 1308 aa18.78■□□□□ 0.6
TNFRSF1A-204ENST00000440083 PHF14O94880 888 aa18.78■□□□□ 0.6
TNFRSF1A-204ENST00000440083 CRKLP46109 303 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-204ENST00000440083 TRMT2AQ8IZ69 625 aaKnown RBP18.78■□□□□ 0.6
TNFRSF1A-204ENST00000440083 ZBTB7AO95365 584 aa18.77■□□□□ 0.6
TNFRSF1A-204ENST00000440083 CYP19A1P11511 503 aaPredicted RBP18.77■□□□□ 0.6
TNFRSF1A-204ENST00000440083 VSIG10Q8N0Z9 540 aa18.77■□□□□ 0.6
TNFRSF1A-204ENST00000440083 MYH16Q9H6N6 1097 aa18.77■□□□□ 0.6
TNFRSF1A-204ENST00000440083 INTS5Q6P9B9 1019 aaKnown RBP18.76■□□□□ 0.59
TNFRSF1A-204ENST00000440083 COL23A1Q86Y22 540 aaPredicted RBP18.76■□□□□ 0.59
TNFRSF1A-204ENST00000440083 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
TNFRSF1A-204ENST00000440083 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.75■□□□□ 0.59
TNFRSF1A-204ENST00000440083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 CHL1O00533 1208 aa18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 MSH5O43196 834 aa18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 RC3H1Q5TC82 1133 aaKnown RBP18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 CCDC87Q9NVE4 849 aa18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 ZBTB1Q9Y2K1 713 aa18.74■□□□□ 0.59
TNFRSF1A-204ENST00000440083 KRT24Q2M2I5 525 aa18.73■□□□□ 0.59
TNFRSF1A-204ENST00000440083 USP16Q9Y5T5 823 aa18.73■□□□□ 0.59
TNFRSF1A-204ENST00000440083 LAMB4A4D0S4 1761 aa18.73■□□□□ 0.59
TNFRSF1A-204ENST00000440083 C4AP0C0L4 1744 aa18.72■□□□□ 0.59
TNFRSF1A-204ENST00000440083 SNRPA1P09661 255 aaKnown RBP18.72■□□□□ 0.59
TNFRSF1A-204ENST00000440083 PIP4K2AP48426 406 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-204ENST00000440083 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
TNFRSF1A-204ENST00000440083 IL16Q14005 1332 aa18.72■□□□□ 0.59
TNFRSF1A-204ENST00000440083 RPS6KA4O75676 772 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 A1BGP04217 495 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 ZNF853P0CG23 659 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 CANXP27824 592 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 SSFA2P28290 1259 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 MSL1Q68DK7 614 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 CFAP44Q96MT7 982 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
TNFRSF1A-204ENST00000440083 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
TNFRSF1A-204ENST00000440083 STARD3NLO95772 234 aa18.7■□□□□ 0.58
TNFRSF1A-204ENST00000440083 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1A-204ENST00000440083 CALD1Q05682 793 aaKnown RBP18.7■□□□□ 0.58
TNFRSF1A-204ENST00000440083 IFT57Q9NWB7 429 aa18.7■□□□□ 0.58
TNFRSF1A-204ENST00000440083 BABAM1Q9NWV8 329 aa18.7■□□□□ 0.58
TNFRSF1A-204ENST00000440083 ARHGEF1Q92888 912 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-204ENST00000440083 TSR2Q969E8 191 aaKnown RBP18.69■□□□□ 0.58
TNFRSF1A-204ENST00000440083 LRP5O75197 1615 aa18.69■□□□□ 0.58
TNFRSF1A-204ENST00000440083 TRAPPC3LQ5T215 181 aa18.68■□□□□ 0.58
TNFRSF1A-204ENST00000440083 TEX13AQ9BXU3 409 aaPredicted RBP18.68■□□□□ 0.58
TNFRSF1A-204ENST00000440083 MTFR1LQ9H019 292 aa18.68■□□□□ 0.58
TNFRSF1A-204ENST00000440083 SRP68Q9UHB9 627 aaKnown RBP18.68■□□□□ 0.58
TNFRSF1A-204ENST00000440083 GNAI1P63096 354 aa18.67■□□□□ 0.58
TNFRSF1A-204ENST00000440083 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
TNFRSF1A-204ENST00000440083 ZNF330Q9Y3S2 320 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-204ENST00000440083 COL15A1P39059 1388 aa18.67■□□□□ 0.58
TNFRSF1A-204ENST00000440083 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
TNFRSF1A-204ENST00000440083 PTGER2P43116 358 aa18.66■□□□□ 0.58
TNFRSF1A-204ENST00000440083 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-204ENST00000440083 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
TNFRSF1A-204ENST00000440083 SPON1Q9HCB6 807 aa18.66■□□□□ 0.58
TNFRSF1A-204ENST00000440083 FANCIQ9NVI1 1328 aa18.66■□□□□ 0.58
TNFRSF1A-204ENST00000440083 ADRA2BP18089 450 aa18.65■□□□□ 0.58
TNFRSF1A-204ENST00000440083 NECTIN2Q92692 538 aa18.65■□□□□ 0.58
TNFRSF1A-204ENST00000440083 SRCAPQ6ZRS2 3230 aa18.65■□□□□ 0.58
TNFRSF1A-204ENST00000440083 COL24A1Q17RW2 1714 aa18.65■□□□□ 0.58
TNFRSF1A-204ENST00000440083 PLIN1O60240 522 aa18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 EIF2S2P20042 333 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 RFC4P35249 363 aa18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 SLC16A10Q8TF71 515 aa18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 SGIP1Q9BQI5 828 aa18.64■□□□□ 0.57
TNFRSF1A-204ENST00000440083 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
TNFRSF1A-204ENST00000440083 B4GALNT3Q6L9W6 998 aa18.63■□□□□ 0.57
TNFRSF1A-204ENST00000440083 ELL2O00472 640 aaPredicted RBP18.62■□□□□ 0.57
TNFRSF1A-204ENST00000440083 ANXA1P04083 346 aa18.62■□□□□ 0.57
TNFRSF1A-204ENST00000440083 C8orf58Q8NAV2 365 aa18.62■□□□□ 0.57
TNFRSF1A-204ENST00000440083 EXOC6Q8TAG9 804 aa18.62■□□□□ 0.57
TNFRSF1A-204ENST00000440083 USP42Q9H9J4 1324 aaKnown RBP18.62■□□□□ 0.57
TNFRSF1A-204ENST00000440083 GYS1P13807 737 aa18.61■□□□□ 0.57
TNFRSF1A-204ENST00000440083 IL6STP40189 918 aaPredicted RBP18.61■□□□□ 0.57
TNFRSF1A-204ENST00000440083 PROSER3Q2NL68 480 aa18.61■□□□□ 0.57
TNFRSF1A-204ENST00000440083 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
TNFRSF1A-204ENST00000440083 TSPYL6Q8N831 410 aa18.61■□□□□ 0.57
TNFRSF1A-204ENST00000440083 SCN7AQ01118 1682 aa18.6■□□□□ 0.57
TNFRSF1A-204ENST00000440083 MYL6BP14649 208 aa18.6■□□□□ 0.57
TNFRSF1A-204ENST00000440083 CRBNQ96SW2 442 aa18.6■□□□□ 0.57
TNFRSF1A-204ENST00000440083 TBC1D2BQ9UPU7 963 aa18.6■□□□□ 0.57
TNFRSF1A-204ENST00000440083 ARXQ96QS3 562 aa18.59■□□□□ 0.57
TNFRSF1A-204ENST00000440083 BCL2L12Q9HB09 334 aa18.59■□□□□ 0.57
TNFRSF1A-204ENST00000440083 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
TNFRSF1A-204ENST00000440083 BCORQ6W2J9 1755 aa18.58■□□□□ 0.57
TNFRSF1A-204ENST00000440083 ZPR1O75312 459 aa18.58■□□□□ 0.56
TNFRSF1A-204ENST00000440083 BCAR3O75815 825 aa18.58■□□□□ 0.56
TNFRSF1A-204ENST00000440083 PDIA6Q15084 440 aa18.58■□□□□ 0.56
TNFRSF1A-204ENST00000440083 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms