RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ERVV-2B6SEH9 535 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 FCHSD2O94868 740 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 SLC27A3Q5K4L6 730 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 TRAPPC3LQ5T215 181 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 ZNF790Q6PG37 636 aa6.09□□□□□ -1.43
EDEM3-203ENST00000439962 ZNF526Q8TF50 670 aaPredicted RBP6.09□□□□□ -1.43
EDEM3-203ENST00000439962 ARHGEF1Q92888 912 aaKnown RBP6.09□□□□□ -1.43
EDEM3-203ENST00000439962 MMP10P09238 476 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 POLD1P28340 1107 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 CENPQQ7L2Z9 268 aaPredicted RBP6.08□□□□□ -1.44
EDEM3-203ENST00000439962 AKT1S1Q96B36 256 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.08□□□□□ -1.441e-6■■■■□ 22.3
EDEM3-203ENST00000439962 TSPYL4Q9UJ04 414 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 MAP3K5Q99683 1374 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 TNS1Q9HBL0 1735 aaKnown RBP6.08□□□□□ -1.44
EDEM3-203ENST00000439962 ANP32AP39687 249 aaKnown RBP6.08□□□□□ -1.44
EDEM3-203ENST00000439962 PDE3AQ14432 1141 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 NKX1-1Q15270 411 aaPredicted RBP6.08□□□□□ -1.44
EDEM3-203ENST00000439962 USPL1Q5W0Q7 1092 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 WDR63Q8IWG1 891 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 SYT17Q9BSW7 474 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 MTFR1LQ9H019 292 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 RGPD1P0DJD0 1748 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 ABCC6O95255 1503 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 ZPR1O75312 459 aa6.08□□□□□ -1.44
EDEM3-203ENST00000439962 TSR2Q969E8 191 aaKnown RBP6.08□□□□□ -1.44
EDEM3-203ENST00000439962 KDRP35968 1356 aa6.07□□□□□ -1.44
EDEM3-203ENST00000439962 KDM2BQ8NHM5 1336 aa6.07□□□□□ -1.44
EDEM3-203ENST00000439962 COL3A1P02461 1466 aaPredicted RBP6.07□□□□□ -1.44
EDEM3-203ENST00000439962 TMPOP42166 694 aaKnown RBP6.07□□□□□ -1.44
EDEM3-203ENST00000439962 PTGER2P43116 358 aa6.07□□□□□ -1.44
EDEM3-203ENST00000439962 A0A0G2JLW4 131 aa6.07□□□□□ -1.44
EDEM3-203ENST00000439962 NFE2L2Q16236 605 aa6.07□□□□□ -1.44
EDEM3-203ENST00000439962 ERICH6Q7L0X2 663 aa6.07□□□□□ -1.44
EDEM3-203ENST00000439962 PNNQ9H307 717 aaKnown RBP6.07□□□□□ -1.44
EDEM3-203ENST00000439962 GPTP24298 496 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 RUNDC1Q96C34 613 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 IPO9Q96P70 1041 aaKnown RBP6.06□□□□□ -1.44
EDEM3-203ENST00000439962 PLEKHF1Q96S99 279 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 ZBTB3Q9H5J0 574 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 IL16Q14005 1332 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 STARD3NLO95772 234 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 TAF7Q15545 349 aaPredicted RBP6.06□□□□□ -1.44
EDEM3-203ENST00000439962 EXOC6Q8TAG9 804 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 FMNL2Q96PY5 1086 aa6.06□□□□□ -1.44
EDEM3-203ENST00000439962 SHANK3Q9BYB0 1731 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 TOGARAM1Q9Y4F4 1720 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 WNK3Q9BYP7 1800 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 DDRGK1Q96HY6 314 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 CCDC87Q9NVE4 849 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 BCS1LQ9Y276 419 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 USP54Q70EL1 1684 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 ITGB4P16144 1822 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 DCAF8L1A6NGE4 600 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 CYP19A1P11511 503 aaPredicted RBP6.05□□□□□ -1.44
EDEM3-203ENST00000439962 GTF2E1P29083 439 aaPredicted RBP6.05□□□□□ -1.44
EDEM3-203ENST00000439962 CHRNA5P30532 468 aa6.05□□□□□ -1.44
EDEM3-203ENST00000439962 INTS5Q6P9B9 1019 aaKnown RBP6.05□□□□□ -1.44
EDEM3-203ENST00000439962 JARID2Q92833 1246 aaPredicted RBP6.05□□□□□ -1.44
EDEM3-203ENST00000439962 NOP58Q9Y2X3 529 aaKnown RBP6.05□□□□□ -1.44
EDEM3-203ENST00000439962 PROSER3Q2NL68 480 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 CDCA7LQ96GN5 454 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 BACH2Q9BYV9 841 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 GYS1P13807 737 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 NHSQ6T4R5 1651 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 TTLL7Q6ZT98 887 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 DZIP3Q86Y13 1208 aaKnown RBP6.04□□□□□ -1.44
EDEM3-203ENST00000439962 NUTM1Q86Y26 1132 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 CCDC85AQ96PX6 553 aaPredicted RBP6.04□□□□□ -1.44
EDEM3-203ENST00000439962 TRIM35Q9UPQ4 493 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
EDEM3-203ENST00000439962 NUP188Q5SRE5 1749 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 CENPFP49454 3210 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 RPS6KA4O75676 772 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 SNRPA1P09661 255 aaKnown RBP6.03□□□□□ -1.44
EDEM3-203ENST00000439962 ZNF622Q969S3 477 aaKnown RBP eCLIP6.03□□□□□ -1.44
EDEM3-203ENST00000439962 CRBNQ96SW2 442 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 BCL2L13Q9BXK5 485 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 BCL11AQ9H165 835 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 MYH16Q9H6N6 1097 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 SSFA2P28290 1259 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 HLFQ16534 295 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 TBC1D9BQ66K14 1250 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 WWC1Q8IX03 1113 aa6.03□□□□□ -1.44
EDEM3-203ENST00000439962 MYH14Q7Z406 1995 aaKnown RBP6.02□□□□□ -1.45
EDEM3-203ENST00000439962 NBPF26B4DH59 902 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 ATP5J2-PTCD1G3V325 749 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 YY1P25490 414 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 PDE4AP27815 886 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 NFIXQ14938 502 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 NBPF10Q6P3W6 841 aaKnown RBP6.02□□□□□ -1.45
EDEM3-203ENST00000439962 SLC51AQ86UW1 340 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 NBPF15Q8N660 670 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 TSPYL6Q8N831 410 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 MBIPQ9NS73 344 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 HEG1Q9ULI3 1381 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 YBX3P16989 372 aaKnown RBP eCLIP6.02□□□□□ -1.45
EDEM3-203ENST00000439962 EIF4A1P60842 406 aaKnown RBP6.02□□□□□ -1.45
EDEM3-203ENST00000439962 DDR1Q08345 913 aa6.02□□□□□ -1.45
EDEM3-203ENST00000439962 HDGFL1Q5TGJ6 251 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms