RNA–Protein interactions for RNA: ENST00000439338.5

UBE2F-212, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 873 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-212ENST00000439338 KDM3BQ7LBC6 1761 aa27.05■■□□□ 1.92
UBE2F-212ENST00000439338 MMP10P09238 476 aa27.05■■□□□ 1.92
UBE2F-212ENST00000439338 NLGN1Q8N2Q7 840 aa27.05■■□□□ 1.92
UBE2F-212ENST00000439338 TEX13AQ9BXU3 409 aaPredicted RBP27.05■■□□□ 1.92
UBE2F-212ENST00000439338 USP42Q9H9J4 1324 aaKnown RBP27.05■■□□□ 1.92
UBE2F-212ENST00000439338 COL15A1P39059 1388 aa27.05■■□□□ 1.92
UBE2F-212ENST00000439338 CANXP27824 592 aaKnown RBP27.04■■□□□ 1.92
UBE2F-212ENST00000439338 ADAMTS8Q9UP79 889 aa27.04■■□□□ 1.92
UBE2F-212ENST00000439338 TMPOP42166 694 aaKnown RBP27.03■■□□□ 1.92
UBE2F-212ENST00000439338 RIPK4P57078 832 aa27.03■■□□□ 1.92
UBE2F-212ENST00000439338 MIS18AQ9NYP9 233 aa27.03■■□□□ 1.92
UBE2F-212ENST00000439338 CD2APQ9Y5K6 639 aa27.02■■□□□ 1.92
UBE2F-212ENST00000439338 RUNDC1Q96C34 613 aa27.01■■□□□ 1.91
UBE2F-212ENST00000439338 RRP7AQ9Y3A4 280 aaKnown RBP27.01■■□□□ 1.91
UBE2F-212ENST00000439338 PRAMEF22A3QJZ6 481 aa27■■□□□ 1.91
UBE2F-212ENST00000439338 FKBP8Q14318 412 aa27■■□□□ 1.91
UBE2F-212ENST00000439338 PNISRQ8TF01 805 aaKnown RBP27■■□□□ 1.91
UBE2F-212ENST00000439338 ZPR1O75312 459 aa26.99■■□□□ 1.91
UBE2F-212ENST00000439338 SNRPA1P09661 255 aaKnown RBP26.99■■□□□ 1.91
UBE2F-212ENST00000439338 EIF5P55010 431 aaKnown RBP26.99■■□□□ 1.91
UBE2F-212ENST00000439338 USPL1Q5W0Q7 1092 aa26.99■■□□□ 1.91
UBE2F-212ENST00000439338 A1BGP04217 495 aa26.98■■□□□ 1.91
UBE2F-212ENST00000439338 NARFQ9UHQ1 456 aa26.98■■□□□ 1.91
UBE2F-212ENST00000439338 USP16Q9Y5T5 823 aa26.98■■□□□ 1.91
UBE2F-212ENST00000439338 LMOD3Q0VAK6 560 aa26.97■■□□□ 1.91
UBE2F-212ENST00000439338 NEUROD2Q15784 382 aa26.97■■□□□ 1.91
UBE2F-212ENST00000439338 LAMB4A4D0S4 1761 aa26.97■■□□□ 1.91
UBE2F-212ENST00000439338 KIF13BQ9NQT8 1826 aa26.96■■□□□ 1.91
UBE2F-212ENST00000439338 CCDC184Q52MB2 194 aa26.96■■□□□ 1.91
UBE2F-212ENST00000439338 PELP1Q8IZL8 1130 aaKnown RBP26.96■■□□□ 1.91
UBE2F-212ENST00000439338 ZNF330Q9Y3S2 320 aaPredicted RBP26.96■■□□□ 1.91
UBE2F-212ENST00000439338 PARP3Q9Y6F1 533 aa26.96■■□□□ 1.91
UBE2F-212ENST00000439338 ANP32CO43423 234 aa26.95■■□□□ 1.9
UBE2F-212ENST00000439338 GPR162Q16538 588 aa26.95■■□□□ 1.9
UBE2F-212ENST00000439338 C10orf71Q711Q0 1435 aa26.94■■□□□ 1.9
UBE2F-212ENST00000439338 A0A087WZG4 1122 aa26.94■■□□□ 1.9
UBE2F-212ENST00000439338 IL6STP40189 918 aaPredicted RBP26.94■■□□□ 1.9
UBE2F-212ENST00000439338 SCN7AQ01118 1682 aa26.94■■□□□ 1.9
UBE2F-212ENST00000439338 PIP4K2AP48426 406 aaPredicted RBP26.93■■□□□ 1.9
UBE2F-212ENST00000439338 DDR1Q08345 913 aa26.93■■□□□ 1.9
UBE2F-212ENST00000439338 BCL2L12Q9HB09 334 aa26.93■■□□□ 1.9
UBE2F-212ENST00000439338 UTRNP46939 3433 aa26.92■■□□□ 1.9
UBE2F-212ENST00000439338 EIF4A1P60842 406 aaKnown RBP26.92■■□□□ 1.9
UBE2F-212ENST00000439338 TSPYL4Q9UJ04 414 aa26.92■■□□□ 1.9
UBE2F-212ENST00000439338 TRIM35Q9UPQ4 493 aa26.91■■□□□ 1.9
UBE2F-212ENST00000439338 KIAA1551Q9HCM1 1747 aa26.9■■□□□ 1.9
UBE2F-212ENST00000439338 TM4SF1P30408 202 aa26.9■■□□□ 1.9
UBE2F-212ENST00000439338 POLRMTO00411 1230 aaKnown RBP26.89■■□□□ 1.9
UBE2F-212ENST00000439338 NPM2Q86SE8 214 aaKnown RBP26.89■■□□□ 1.9
UBE2F-212ENST00000439338 TBC1D2BQ9UPU7 963 aa26.89■■□□□ 1.9
UBE2F-212ENST00000439338 GOLGB1Q14789 3259 aaKnown RBP26.89■■□□□ 1.9
UBE2F-212ENST00000439338 BCORQ6W2J9 1755 aa26.89■■□□□ 1.89
UBE2F-212ENST00000439338 PXDNLA1KZ92 1463 aa26.88■■□□□ 1.89
UBE2F-212ENST00000439338 GIGYF1O75420 1035 aaPredicted RBP26.88■■□□□ 1.89
UBE2F-212ENST00000439338 YBX3P16989 372 aaKnown RBP eCLIP26.88■■□□□ 1.891e-6■■□□□ 11.6
UBE2F-212ENST00000439338 NFIXQ14938 502 aa26.88■■□□□ 1.89
UBE2F-212ENST00000439338 N4BP2Q86UW6 1770 aaPredicted RBP26.88■■□□□ 1.89
UBE2F-212ENST00000439338 AFDNP55196 1824 aaKnown RBP26.88■■□□□ 1.89
UBE2F-212ENST00000439338 CHD4Q14839 1912 aa26.87■■□□□ 1.89
UBE2F-212ENST00000439338 NBPF26B4DH59 902 aa26.86■■□□□ 1.89
UBE2F-212ENST00000439338 APAF1O14727 1248 aa26.86■■□□□ 1.89
UBE2F-212ENST00000439338 YY1P25490 414 aa26.86■■□□□ 1.89
UBE2F-212ENST00000439338 NBPF10Q6P3W6 841 aaKnown RBP26.86■■□□□ 1.89
UBE2F-212ENST00000439338 NBPF15Q8N660 670 aa26.86■■□□□ 1.89
UBE2F-212ENST00000439338 BABAM1Q9NWV8 329 aa26.86■■□□□ 1.89
UBE2F-212ENST00000439338 WWC3Q9ULE0 1092 aa26.86■■□□□ 1.89
UBE2F-212ENST00000439338 DZIP3Q86Y13 1208 aaKnown RBP26.85■■□□□ 1.89
UBE2F-212ENST00000439338 MRS2Q9HD23 443 aa26.85■■□□□ 1.89
UBE2F-212ENST00000439338 NRXN2Q9P2S2 1712 aa26.85■■□□□ 1.89
UBE2F-212ENST00000439338 CAMTA2O94983 1202 aa26.84■■□□□ 1.89
UBE2F-212ENST00000439338 TGFB2P61812 414 aa26.83■■□□□ 1.89
UBE2F-212ENST00000439338 BICDL1Q6ZP65 573 aa26.83■■□□□ 1.89
UBE2F-212ENST00000439338 TBC1D9BQ66K14 1250 aa26.82■■□□□ 1.88
UBE2F-212ENST00000439338 LAS1LQ9Y4W2 734 aaKnown RBP26.82■■□□□ 1.88
UBE2F-212ENST00000439338 A0A0G2JLW4 131 aa26.8■■□□□ 1.88
UBE2F-212ENST00000439338 CHL1O00533 1208 aa26.8■■□□□ 1.88
UBE2F-212ENST00000439338 GRIN3BO60391 1043 aa26.8■■□□□ 1.88
UBE2F-212ENST00000439338 SERPINB2P05120 415 aa26.8■■□□□ 1.88
UBE2F-212ENST00000439338 DPEP1P16444 411 aa26.8■■□□□ 1.88
UBE2F-212ENST00000439338 BRCA1P38398 1863 aaKnown RBP26.79■■□□□ 1.88
UBE2F-212ENST00000439338 CARMIL3Q8ND23 1372 aa26.76■■□□□ 1.87
UBE2F-212ENST00000439338 EIF2S2P20042 333 aaKnown RBP26.75■■□□□ 1.87
UBE2F-212ENST00000439338 KRT24Q2M2I5 525 aa26.75■■□□□ 1.87
UBE2F-212ENST00000439338 NGEFQ8N5V2 710 aa26.75■■□□□ 1.87
UBE2F-212ENST00000439338 ERBB4Q15303 1308 aa26.74■■□□□ 1.87
UBE2F-212ENST00000439338 MYL6BP14649 208 aa26.74■■□□□ 1.87
UBE2F-212ENST00000439338 CFAP44Q96MT7 982 aa26.74■■□□□ 1.87
UBE2F-212ENST00000439338 ZNF652Q9Y2D9 606 aa26.74■■□□□ 1.87
UBE2F-212ENST00000439338 SENP3-EIF4A1A0A087X0R7 540 aa26.73■■□□□ 1.87
UBE2F-212ENST00000439338 KCNA3P22001 575 aa26.73■■□□□ 1.87
UBE2F-212ENST00000439338 CHRNA5P30532 468 aa26.73■■□□□ 1.87
UBE2F-212ENST00000439338 CLEC4GQ6UXB4 293 aa26.73■■□□□ 1.87
UBE2F-212ENST00000439338 SETDB2Q96T68 719 aa26.73■■□□□ 1.87
UBE2F-212ENST00000439338 BCS1LQ9Y276 419 aa26.73■■□□□ 1.87
UBE2F-212ENST00000439338 ANKRD31Q8N7Z5 1873 aa26.72■■□□□ 1.87
UBE2F-212ENST00000439338 TTLL7Q6ZT98 887 aa26.71■■□□□ 1.87
UBE2F-212ENST00000439338 MBIPQ9NS73 344 aa26.71■■□□□ 1.87
UBE2F-212ENST00000439338 ZNF853P0CG23 659 aa26.7■■□□□ 1.86
UBE2F-212ENST00000439338 CALD1Q05682 793 aaKnown RBP26.7■■□□□ 1.86
UBE2F-212ENST00000439338 HLFQ16534 295 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms