RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 CFAP44Q96MT7 982 aa13.65□□□□□ -0.22
SMPD4-208ENST00000439029 TESK2Q96S53 571 aa13.65□□□□□ -0.22
SMPD4-208ENST00000439029 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
SMPD4-208ENST00000439029 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
SMPD4-208ENST00000439029 ZPR1O75312 459 aa13.64□□□□□ -0.23
SMPD4-208ENST00000439029 NFIXQ14938 502 aa13.64□□□□□ -0.23
SMPD4-208ENST00000439029 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
SMPD4-208ENST00000439029 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
SMPD4-208ENST00000439029 TMEM88BA6NKF7 163 aa13.63□□□□□ -0.23
SMPD4-208ENST00000439029 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
SMPD4-208ENST00000439029 C21orf2O43822 256 aa13.63□□□□□ -0.23
SMPD4-208ENST00000439029 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
SMPD4-208ENST00000439029 AFDNP55196 1824 aaKnown RBP13.62□□□□□ -0.23
SMPD4-208ENST00000439029 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
SMPD4-208ENST00000439029 CARMIL3Q8ND23 1372 aa13.62□□□□□ -0.23
SMPD4-208ENST00000439029 SERPINB2P05120 415 aa13.62□□□□□ -0.23
SMPD4-208ENST00000439029 EAPPQ56P03 285 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-208ENST00000439029 CCDC24Q8N4L8 307 aa13.62□□□□□ -0.23
SMPD4-208ENST00000439029 ZNF622Q969S3 477 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMPD4-208ENST00000439029 H0YIN7 160 aa13.61□□□□□ -0.23
SMPD4-208ENST00000439029 BICDL1Q6ZP65 573 aa13.61□□□□□ -0.23
SMPD4-208ENST00000439029 ZNF831Q5JPB2 1677 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
SMPD4-208ENST00000439029 KIF20BQ96Q89 1820 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 ITGBL1O95965 494 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-208ENST00000439029 RGS19P49795 217 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 GRM1Q13255 1194 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 LDHDQ86WU2 507 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 DNAJC10Q8IXB1 793 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 TSKSQ9UJT2 592 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 WASHC2AQ641Q2 1341 aa13.6□□□□□ -0.23
SMPD4-208ENST00000439029 DEFB115Q30KQ5 88 aa13.59□□□□□ -0.23
SMPD4-208ENST00000439029 ZNF530Q6P9A1 599 aaPredicted RBP13.59□□□□□ -0.23
SMPD4-208ENST00000439029 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
SMPD4-208ENST00000439029 TAF1DQ9H5J8 278 aaPredicted RBP13.59□□□□□ -0.23
SMPD4-208ENST00000439029 BCL2L12Q9HB09 334 aa13.59□□□□□ -0.23
SMPD4-208ENST00000439029 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
SMPD4-208ENST00000439029 DLEC1Q9Y238 1755 aa13.58□□□□□ -0.23
SMPD4-208ENST00000439029 EIF4A2Q14240 407 aaKnown RBP13.58□□□□□ -0.24
SMPD4-208ENST00000439029 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-208ENST00000439029 CARD14Q9BXL6 1004 aa13.58□□□□□ -0.24
SMPD4-208ENST00000439029 ABT1Q9ULW3 272 aaKnown RBP13.58□□□□□ -0.24
SMPD4-208ENST00000439029 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
SMPD4-208ENST00000439029 TJP1Q07157 1748 aa13.58□□□□□ -0.24
SMPD4-208ENST00000439029 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
SMPD4-208ENST00000439029 MTHFSP49914 203 aa13.57□□□□□ -0.24
SMPD4-208ENST00000439029 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-208ENST00000439029 MAP1SQ66K74 1059 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-208ENST00000439029 TAOK3Q9H2K8 898 aa13.57□□□□□ -0.24
SMPD4-208ENST00000439029 NARFQ9UHQ1 456 aa13.57□□□□□ -0.24
SMPD4-208ENST00000439029 SOS1Q07889 1333 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-208ENST00000439029 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
SMPD4-208ENST00000439029 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
SMPD4-208ENST00000439029 RASSF10A6NK89 507 aa13.56□□□□□ -0.24
SMPD4-208ENST00000439029 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-208ENST00000439029 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-208ENST00000439029 IQCA1LA6NCM1 817 aa13.55□□□□□ -0.24
SMPD4-208ENST00000439029 POLKQ9UBT6 870 aa13.55□□□□□ -0.24
SMPD4-208ENST00000439029 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
SMPD4-208ENST00000439029 NRXN2Q9P2S2 1712 aa13.54□□□□□ -0.24
SMPD4-208ENST00000439029 FMR1Q06787 632 aaKnown RBP eCLIP13.54□□□□□ -0.24
SMPD4-208ENST00000439029 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
SMPD4-208ENST00000439029 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
SMPD4-208ENST00000439029 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
SMPD4-208ENST00000439029 BEGAINQ9BUH8 593 aa13.53□□□□□ -0.24
SMPD4-208ENST00000439029 MCOLN1Q9GZU1 580 aa13.53□□□□□ -0.24
SMPD4-208ENST00000439029 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
SMPD4-208ENST00000439029 COL15A1P39059 1388 aa13.53□□□□□ -0.24
SMPD4-208ENST00000439029 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
SMPD4-208ENST00000439029 EPHX2P34913 555 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 SLC39A6Q13433 755 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 C1orf141Q5JVX7 400 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 CYP4F22Q6NT55 531 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 AEBP1Q8IUX7 1158 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 L3MBTL3Q96JM7 780 aaPredicted RBP13.52□□□□□ -0.25
SMPD4-208ENST00000439029 CAPNS2Q96L46 248 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 HACL1Q9UJ83 578 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 ANKRD31Q8N7Z5 1873 aa13.52□□□□□ -0.25
SMPD4-208ENST00000439029 SLX4Q8IY92 1834 aa13.51□□□□□ -0.25
SMPD4-208ENST00000439029 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
SMPD4-208ENST00000439029 TBC1D9BQ66K14 1250 aa13.51□□□□□ -0.25
SMPD4-208ENST00000439029 COL11A2P13942 1736 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-208ENST00000439029 ANKRD26Q9UPS8 1709 aa13.5□□□□□ -0.25
SMPD4-208ENST00000439029 RNF123Q5XPI4 1314 aa13.5□□□□□ -0.25
SMPD4-208ENST00000439029 PDE6BP35913 854 aa13.5□□□□□ -0.25
SMPD4-208ENST00000439029 PRR5LQ6MZQ0 368 aa13.5□□□□□ -0.25
SMPD4-208ENST00000439029 PRPF40BQ6NWY9 871 aaKnown RBP13.5□□□□□ -0.25
SMPD4-208ENST00000439029 GPR101Q96P66 508 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-208ENST00000439029 CASP8AP2Q9UKL3 1982 aa13.5□□□□□ -0.25
SMPD4-208ENST00000439029 SCN4AP35499 1836 aa13.5□□□□□ -0.25
SMPD4-208ENST00000439029 CACNA1SQ13698 1873 aa13.49□□□□□ -0.25
SMPD4-208ENST00000439029 AOC2O75106 756 aa13.49□□□□□ -0.25
SMPD4-208ENST00000439029 AMOTQ4VCS5 1084 aa13.49□□□□□ -0.25
SMPD4-208ENST00000439029 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
SMPD4-208ENST00000439029 ZNF277Q9NRM2 450 aaPredicted RBP13.49□□□□□ -0.25
SMPD4-208ENST00000439029 ZNF330Q9Y3S2 320 aaPredicted RBP13.49□□□□□ -0.25
SMPD4-208ENST00000439029 DGKZQ13574 1117 aa13.48□□□□□ -0.25
SMPD4-208ENST00000439029 OLFM4Q6UX06 510 aa13.48□□□□□ -0.25
SMPD4-208ENST00000439029 DDX21Q9NR30 783 aaKnown RBP eCLIP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms