RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCDC155Q8N6L0 562 aa7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 SCHIP1Q9P0W5 487 aaPredicted RBP7.12□□□□□ -1.27
TRAPPC13-204ENST00000438419 M0R2N6 131 aa7.11□□□□□ -1.27
TRAPPC13-204ENST00000438419 SEC13P55735 322 aa7.11□□□□□ -1.27
TRAPPC13-204ENST00000438419 TMEM214Q6NUQ4 689 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-204ENST00000438419 TAS1R3Q7RTX0 852 aa7.11□□□□□ -1.27
TRAPPC13-204ENST00000438419 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
TRAPPC13-204ENST00000438419 PHKA2P46019 1235 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 RHBDD1Q8TEB9 315 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 PBXIP1Q96AQ6 731 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 ZMIZ1Q9ULJ6 1067 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 PPP1R15AO75807 674 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 ATG7O95352 703 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 GNASQ5JWF2 1037 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 TBCELQ5QJ74 424 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 CUEDC1Q9NWM3 386 aaPredicted RBP7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 DYRK1BQ9Y463 629 aa7.1□□□□□ -1.27
TRAPPC13-204ENST00000438419 LGR5O75473 907 aa7.09□□□□□ -1.28
TRAPPC13-204ENST00000438419 ELOAQ14241 798 aaKnown RBP7.09□□□□□ -1.28
TRAPPC13-204ENST00000438419 SLC9A9Q8IVB4 645 aa7.09□□□□□ -1.28
TRAPPC13-204ENST00000438419 ZDHHC1Q8WTX9 485 aa7.09□□□□□ -1.28
TRAPPC13-204ENST00000438419 TSPAN10Q9H1Z9 355 aaPredicted RBP7.09□□□□□ -1.28
TRAPPC13-204ENST00000438419 NOVA2Q9UNW9 492 aaKnown RBP7.09□□□□□ -1.28
TRAPPC13-204ENST00000438419 C21orf2O43822 256 aa7.08□□□□□ -1.28
TRAPPC13-204ENST00000438419 ITGA6P23229 1130 aa7.08□□□□□ -1.28
TRAPPC13-204ENST00000438419 KANK3Q6NY19 840 aa7.08□□□□□ -1.28
TRAPPC13-204ENST00000438419 STK32AQ8WU08 396 aa7.08□□□□□ -1.28
TRAPPC13-204ENST00000438419 NIFKQ9BYG3 293 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-204ENST00000438419 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
TRAPPC13-204ENST00000438419 GTF2E1P29083 439 aaPredicted RBP7.07□□□□□ -1.28
TRAPPC13-204ENST00000438419 PLA2G4AP47712 749 aa7.07□□□□□ -1.28
TRAPPC13-204ENST00000438419 FAM69CQ0P6D2 419 aa7.07□□□□□ -1.28
TRAPPC13-204ENST00000438419 FAM200AQ8TCP9 573 aa7.07□□□□□ -1.28
TRAPPC13-204ENST00000438419 PARP3Q9Y6F1 533 aa7.07□□□□□ -1.28
TRAPPC13-204ENST00000438419 THBS1P07996 1170 aa7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 TEAD4Q15561 434 aa7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 LCE3BQ5TA77 95 aa7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 SH3PXD2AQ5TCZ1 1133 aa7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 GAS2L2Q8NHY3 880 aa7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 NANOS1Q8WY41 292 aaKnown RBP7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 GAS2L1Q99501 681 aaPredicted RBP7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 CABP1Q9NZU7 370 aa7.06□□□□□ -1.28
TRAPPC13-204ENST00000438419 A0A1B0GTH6 734 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 F11P03951 625 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 MSX1P28360 303 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 DBN1Q16643 649 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 POTEAQ6S8J7 498 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 Q8N3U1 123 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 GPR161Q8N6U8 529 aaKnown RBP7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 HINFPQ9BQA5 517 aa7.05□□□□□ -1.28
TRAPPC13-204ENST00000438419 ATAD2Q6PL18 1390 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 MSTNO14793 375 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 ATP4AP20648 1035 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 NOS2P35228 1153 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 TMEM164Q5U3C3 297 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 VWA5B2Q8N398 1253 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 SCG3Q8WXD2 468 aaKnown RBP7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 L3MBTL2Q969R5 705 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 GPAMQ9HCL2 828 aa7.04□□□□□ -1.28
TRAPPC13-204ENST00000438419 ACIN1Q9UKV3 1341 aaKnown RBP7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 EML1O00423 815 aa7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 TXLNAP40222 546 aa7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 RIPOR1Q6ZS17 1223 aa7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 TRIM22Q8IYM9 498 aa7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 C7orf43Q8WVR3 580 aa7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 SLAIN2Q9P270 581 aa7.03□□□□□ -1.28
TRAPPC13-204ENST00000438419 WEE1P30291 646 aa7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 MARSP56192 900 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 PSMA6P60900 246 aaKnown RBP7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 AIDAQ96BJ3 306 aa7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 ZNF837Q96EG3 531 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 RUBCNLQ9H714 662 aa7.02□□□□□ -1.29
TRAPPC13-204ENST00000438419 SERTM1A2A2V5 107 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 PPP1R12BO60237 982 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 IGFBP4P22692 258 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 UBAP2LQ14157 1087 aaKnown RBP7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 SWI5Q1ZZU3 235 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 STAG2Q8N3U4 1231 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 KLRG1Q96E93 195 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 C2orf49Q9BVC5 232 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 ZDHHC3Q9NYG2 299 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 CDC14CA4D256 554 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 BTBD11A6QL63 1104 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 HIRAP54198 1017 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 OCLNQ16625 522 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 SV2AQ7L0J3 742 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 C1orf216Q8TAB5 229 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 PRIMPOLQ96LW4 560 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 CNTNAP3BQ96NU0 1288 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 CNTNAP3Q9BZ76 1288 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 CRISPLD1Q9H336 500 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 HCN4Q9Y3Q4 1203 aa7.01□□□□□ -1.29
TRAPPC13-204ENST00000438419 NBPF1Q3BBV0 1214 aa7□□□□□ -1.29
TRAPPC13-204ENST00000438419 CHMP7Q8WUX9 453 aaPredicted RBP7□□□□□ -1.29
TRAPPC13-204ENST00000438419 GMCL1Q96IK5 515 aa7□□□□□ -1.29
TRAPPC13-204ENST00000438419 ZIC5Q96T25 663 aa7□□□□□ -1.29
TRAPPC13-204ENST00000438419 NUCKS1Q9H1E3 243 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms