RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 DLG5Q8TDM6 1919 aa23.48■■□□□ 1.35
NCSTN-208ENST00000438008 LMOD3Q0VAK6 560 aa23.47■■□□□ 1.35
NCSTN-208ENST00000438008 THUMPD2Q9BTF0 503 aaKnown RBP23.47■■□□□ 1.35
NCSTN-208ENST00000438008 GYS1P13807 737 aa23.46■■□□□ 1.35
NCSTN-208ENST00000438008 USP42Q9H9J4 1324 aaKnown RBP23.45■■□□□ 1.34
NCSTN-208ENST00000438008 SNRPA1P09661 255 aaKnown RBP23.45■■□□□ 1.34
NCSTN-208ENST00000438008 CCDC184Q52MB2 194 aa23.44■■□□□ 1.34
NCSTN-208ENST00000438008 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
NCSTN-208ENST00000438008 RRP7AQ9Y3A4 280 aaKnown RBP23.43■■□□□ 1.34
NCSTN-208ENST00000438008 COL15A1P39059 1388 aa23.42■■□□□ 1.34
NCSTN-208ENST00000438008 MMP10P09238 476 aa23.42■■□□□ 1.34
NCSTN-208ENST00000438008 CANXP27824 592 aaKnown RBP23.42■■□□□ 1.34
NCSTN-208ENST00000438008 EIF5P55010 431 aaKnown RBP23.42■■□□□ 1.34
NCSTN-208ENST00000438008 BABAM1Q9NWV8 329 aa23.42■■□□□ 1.34
NCSTN-208ENST00000438008 SRP68Q9UHB9 627 aaKnown RBP23.42■■□□□ 1.34
NCSTN-208ENST00000438008 CD2APQ9Y5K6 639 aa23.42■■□□□ 1.34
NCSTN-208ENST00000438008 USP16Q9Y5T5 823 aa23.42■■□□□ 1.34
NCSTN-208ENST00000438008 C4AP0C0L4 1744 aa23.42■■□□□ 1.34
NCSTN-208ENST00000438008 KLHL34Q8N239 644 aa23.41■■□□□ 1.34
NCSTN-208ENST00000438008 NARFQ9UHQ1 456 aa23.41■■□□□ 1.34
NCSTN-208ENST00000438008 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
NCSTN-208ENST00000438008 PRAMEF22A3QJZ6 481 aa23.4■■□□□ 1.34
NCSTN-208ENST00000438008 DCAF8L1A6NGE4 600 aa23.4■■□□□ 1.34
NCSTN-208ENST00000438008 ZPR1O75312 459 aa23.4■■□□□ 1.34
NCSTN-208ENST00000438008 IL6STP40189 918 aaPredicted RBP23.4■■□□□ 1.34
NCSTN-208ENST00000438008 NEUROD2Q15784 382 aa23.4■■□□□ 1.34
NCSTN-208ENST00000438008 A0A087WZG4 1122 aa23.39■■□□□ 1.33
NCSTN-208ENST00000438008 A1BGP04217 495 aa23.39■■□□□ 1.33
NCSTN-208ENST00000438008 EIF4A1P60842 406 aaKnown RBP23.39■■□□□ 1.33
NCSTN-208ENST00000438008 FKBP8Q14318 412 aa23.38■■□□□ 1.33
NCSTN-208ENST00000438008 USPL1Q5W0Q7 1092 aa23.38■■□□□ 1.33
NCSTN-208ENST00000438008 KDM3BQ7LBC6 1761 aa23.37■■□□□ 1.33
NCSTN-208ENST00000438008 NLGN2Q8NFZ4 835 aa23.37■■□□□ 1.33
NCSTN-208ENST00000438008 MRS2Q9HD23 443 aa23.37■■□□□ 1.33
NCSTN-208ENST00000438008 TSPYL4Q9UJ04 414 aa23.37■■□□□ 1.33
NCSTN-208ENST00000438008 APAF1O14727 1248 aa23.36■■□□□ 1.33
NCSTN-208ENST00000438008 GIGYF1O75420 1035 aaPredicted RBP23.36■■□□□ 1.33
NCSTN-208ENST00000438008 TM4SF1P30408 202 aa23.35■■□□□ 1.33
NCSTN-208ENST00000438008 PARP3Q9Y6F1 533 aa23.35■■□□□ 1.33
NCSTN-208ENST00000438008 BCL2L12Q9HB09 334 aa23.34■■□□□ 1.33
NCSTN-208ENST00000438008 CHL1O00533 1208 aa23.33■■□□□ 1.33
NCSTN-208ENST00000438008 DDR1Q08345 913 aa23.32■■□□□ 1.32
NCSTN-208ENST00000438008 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
NCSTN-208ENST00000438008 NBPF26B4DH59 902 aa23.31■■□□□ 1.32
NCSTN-208ENST00000438008 NBPF10Q6P3W6 841 aaKnown RBP23.31■■□□□ 1.32
NCSTN-208ENST00000438008 NBPF15Q8N660 670 aa23.31■■□□□ 1.32
NCSTN-208ENST00000438008 ZNF330Q9Y3S2 320 aaPredicted RBP23.31■■□□□ 1.32
NCSTN-208ENST00000438008 POLRMTO00411 1230 aaKnown RBP23.3■■□□□ 1.32
NCSTN-208ENST00000438008 NFIXQ14938 502 aa23.3■■□□□ 1.32
NCSTN-208ENST00000438008 TBC1D2BQ9UPU7 963 aa23.3■■□□□ 1.32
NCSTN-208ENST00000438008 C10orf71Q711Q0 1435 aa23.3■■□□□ 1.32
NCSTN-208ENST00000438008 PIP4K2AP48426 406 aaPredicted RBP23.29■■□□□ 1.32
NCSTN-208ENST00000438008 CAMTA2O94983 1202 aa23.28■■□□□ 1.32
NCSTN-208ENST00000438008 DZIP3Q86Y13 1208 aaKnown RBP23.28■■□□□ 1.32
NCSTN-208ENST00000438008 CFAP44Q96MT7 982 aa23.28■■□□□ 1.32
NCSTN-208ENST00000438008 TGFB2P61812 414 aa23.27■■□□□ 1.32
NCSTN-208ENST00000438008 CALD1Q05682 793 aaKnown RBP23.27■■□□□ 1.32
NCSTN-208ENST00000438008 GPR162Q16538 588 aa23.27■■□□□ 1.32
NCSTN-208ENST00000438008 LAMB4A4D0S4 1761 aa23.27■■□□□ 1.32
NCSTN-208ENST00000438008 RGL2O15211 777 aa23.26■■□□□ 1.31
NCSTN-208ENST00000438008 ZNF853P0CG23 659 aa23.26■■□□□ 1.31
NCSTN-208ENST00000438008 NCBP3Q53F19 620 aaKnown RBP23.26■■□□□ 1.31
NCSTN-208ENST00000438008 ERBB4Q15303 1308 aa23.26■■□□□ 1.31
NCSTN-208ENST00000438008 LAS1LQ9Y4W2 734 aaKnown RBP23.25■■□□□ 1.31
NCSTN-208ENST00000438008 KIF13BQ9NQT8 1826 aa23.24■■□□□ 1.31
NCSTN-208ENST00000438008 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
NCSTN-208ENST00000438008 TBC1D9BQ66K14 1250 aa23.24■■□□□ 1.31
NCSTN-208ENST00000438008 CLEC4GQ6UXB4 293 aa23.24■■□□□ 1.31
NCSTN-208ENST00000438008 IFT57Q9NWB7 429 aa23.24■■□□□ 1.31
NCSTN-208ENST00000438008 SCN7AQ01118 1682 aa23.24■■□□□ 1.31
NCSTN-208ENST00000438008 SERPINB2P05120 415 aa23.23■■□□□ 1.31
NCSTN-208ENST00000438008 PXDNLA1KZ92 1463 aa23.23■■□□□ 1.31
NCSTN-208ENST00000438008 YBX3P16989 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
NCSTN-208ENST00000438008 PELP1Q8IZL8 1130 aaKnown RBP23.22■■□□□ 1.31
NCSTN-208ENST00000438008 GRIN3BO60391 1043 aa23.21■■□□□ 1.31
NCSTN-208ENST00000438008 GNAI1P63096 354 aa23.21■■□□□ 1.31
NCSTN-208ENST00000438008 BICDL1Q6ZP65 573 aa23.21■■□□□ 1.31
NCSTN-208ENST00000438008 MBIPQ9NS73 344 aa23.21■■□□□ 1.31
NCSTN-208ENST00000438008 HOXB7P09629 217 aa23.2■■□□□ 1.3
NCSTN-208ENST00000438008 ZNF652Q9Y2D9 606 aa23.2■■□□□ 1.3
NCSTN-208ENST00000438008 A0A0G2JLW4 131 aa23.19■■□□□ 1.3
NCSTN-208ENST00000438008 DPEP1P16444 411 aa23.19■■□□□ 1.3
NCSTN-208ENST00000438008 EIF2S2P20042 333 aaKnown RBP23.19■■□□□ 1.3
NCSTN-208ENST00000438008 PDIA6Q15084 440 aa23.19■■□□□ 1.3
NCSTN-208ENST00000438008 KRT24Q2M2I5 525 aa23.19■■□□□ 1.3
NCSTN-208ENST00000438008 SETDB2Q96T68 719 aa23.19■■□□□ 1.3
NCSTN-208ENST00000438008 NRXN2Q9P2S2 1712 aa23.19■■□□□ 1.3
NCSTN-208ENST00000438008 CARMIL3Q8ND23 1372 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 ERVV-1B6SEH8 477 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 MYL6BP14649 208 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 LRP10Q7Z4F1 713 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 BCORQ6W2J9 1755 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 KIAA1551Q9HCM1 1747 aa23.18■■□□□ 1.3
NCSTN-208ENST00000438008 KCNA3P22001 575 aa23.17■■□□□ 1.3
NCSTN-208ENST00000438008 NGEFQ8N5V2 710 aa23.17■■□□□ 1.3
NCSTN-208ENST00000438008 MAP3K15Q6ZN16 1313 aa23.16■■□□□ 1.3
NCSTN-208ENST00000438008 FAM9BQ8IZU0 186 aa23.16■■□□□ 1.3
NCSTN-208ENST00000438008 HLFQ16534 295 aa23.15■■□□□ 1.3
NCSTN-208ENST00000438008 KIF6Q6ZMV9 814 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms