RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 THUMPD2Q9BTF0 503 aaKnown RBP25.72■■□□□ 1.71
SURF1-202ENST00000437995 ANP32CO43423 234 aa25.71■■□□□ 1.71
SURF1-202ENST00000437995 NLGN1Q8N2Q7 840 aa25.71■■□□□ 1.71
SURF1-202ENST00000437995 PNISRQ8TF01 805 aaKnown RBP25.71■■□□□ 1.71
SURF1-202ENST00000437995 USP42Q9H9J4 1324 aaKnown RBP25.7■■□□□ 1.71
SURF1-202ENST00000437995 GYS1P13807 737 aa25.7■■□□□ 1.7
SURF1-202ENST00000437995 LMOD3Q0VAK6 560 aa25.7■■□□□ 1.7
SURF1-202ENST00000437995 COL15A1P39059 1388 aa25.69■■□□□ 1.7
SURF1-202ENST00000437995 DCAF8L1A6NGE4 600 aa25.69■■□□□ 1.7
SURF1-202ENST00000437995 MIS18AQ9NYP9 233 aa25.69■■□□□ 1.7
SURF1-202ENST00000437995 SRP68Q9UHB9 627 aaKnown RBP25.69■■□□□ 1.7
SURF1-202ENST00000437995 MMP10P09238 476 aa25.68■■□□□ 1.7
SURF1-202ENST00000437995 CANXP27824 592 aaKnown RBP25.68■■□□□ 1.7
SURF1-202ENST00000437995 RRP7AQ9Y3A4 280 aaKnown RBP25.68■■□□□ 1.7
SURF1-202ENST00000437995 KDM3BQ7LBC6 1761 aa25.68■■□□□ 1.7
SURF1-202ENST00000437995 SNRPA1P09661 255 aaKnown RBP25.67■■□□□ 1.7
SURF1-202ENST00000437995 CD2APQ9Y5K6 639 aa25.66■■□□□ 1.7
SURF1-202ENST00000437995 ZPR1O75312 459 aa25.65■■□□□ 1.7
SURF1-202ENST00000437995 NEUROD2Q15784 382 aa25.65■■□□□ 1.7
SURF1-202ENST00000437995 CCDC184Q52MB2 194 aa25.65■■□□□ 1.7
SURF1-202ENST00000437995 NLGN2Q8NFZ4 835 aa25.65■■□□□ 1.7
SURF1-202ENST00000437995 USP16Q9Y5T5 823 aa25.65■■□□□ 1.7
SURF1-202ENST00000437995 EIF5P55010 431 aaKnown RBP25.64■■□□□ 1.7
SURF1-202ENST00000437995 NARFQ9UHQ1 456 aa25.64■■□□□ 1.7
SURF1-202ENST00000437995 PRAMEF22A3QJZ6 481 aa25.63■■□□□ 1.69
SURF1-202ENST00000437995 A1BGP04217 495 aa25.63■■□□□ 1.69
SURF1-202ENST00000437995 FKBP8Q14318 412 aa25.63■■□□□ 1.69
SURF1-202ENST00000437995 A0A087WZG4 1122 aa25.62■■□□□ 1.69
SURF1-202ENST00000437995 IL6STP40189 918 aaPredicted RBP25.62■■□□□ 1.69
SURF1-202ENST00000437995 USPL1Q5W0Q7 1092 aa25.62■■□□□ 1.69
SURF1-202ENST00000437995 TRIM35Q9UPQ4 493 aa25.61■■□□□ 1.69
SURF1-202ENST00000437995 EIF4A1P60842 406 aaKnown RBP25.6■■□□□ 1.69
SURF1-202ENST00000437995 BABAM1Q9NWV8 329 aa25.6■■□□□ 1.69
SURF1-202ENST00000437995 TSPYL4Q9UJ04 414 aa25.6■■□□□ 1.69
SURF1-202ENST00000437995 ZNF330Q9Y3S2 320 aaPredicted RBP25.6■■□□□ 1.69
SURF1-202ENST00000437995 PARP3Q9Y6F1 533 aa25.6■■□□□ 1.69
SURF1-202ENST00000437995 LAMB4A4D0S4 1761 aa25.59■■□□□ 1.69
SURF1-202ENST00000437995 MRS2Q9HD23 443 aa25.59■■□□□ 1.69
SURF1-202ENST00000437995 NPM2Q86SE8 214 aaKnown RBP25.58■■□□□ 1.69
SURF1-202ENST00000437995 APAF1O14727 1248 aa25.57■■□□□ 1.68
SURF1-202ENST00000437995 GIGYF1O75420 1035 aaPredicted RBP25.57■■□□□ 1.68
SURF1-202ENST00000437995 BCL2L12Q9HB09 334 aa25.57■■□□□ 1.68
SURF1-202ENST00000437995 TM4SF1P30408 202 aa25.56■■□□□ 1.68
SURF1-202ENST00000437995 DDR1Q08345 913 aa25.56■■□□□ 1.68
SURF1-202ENST00000437995 KIF13BQ9NQT8 1826 aa25.56■■□□□ 1.68
SURF1-202ENST00000437995 C10orf71Q711Q0 1435 aa25.55■■□□□ 1.68
SURF1-202ENST00000437995 SCN7AQ01118 1682 aa25.55■■□□□ 1.68
SURF1-202ENST00000437995 PIP4K2AP48426 406 aaPredicted RBP25.55■■□□□ 1.68
SURF1-202ENST00000437995 GPR162Q16538 588 aa25.55■■□□□ 1.68
SURF1-202ENST00000437995 TBC1D2BQ9UPU7 963 aa25.54■■□□□ 1.68
SURF1-202ENST00000437995 POLRMTO00411 1230 aaKnown RBP25.53■■□□□ 1.68
SURF1-202ENST00000437995 NFIXQ14938 502 aa25.53■■□□□ 1.68
SURF1-202ENST00000437995 PELP1Q8IZL8 1130 aaKnown RBP25.53■■□□□ 1.68
SURF1-202ENST00000437995 NBPF26B4DH59 902 aa25.52■■□□□ 1.68
SURF1-202ENST00000437995 CHL1O00533 1208 aa25.52■■□□□ 1.68
SURF1-202ENST00000437995 NBPF10Q6P3W6 841 aaKnown RBP25.52■■□□□ 1.68
SURF1-202ENST00000437995 NBPF15Q8N660 670 aa25.52■■□□□ 1.68
SURF1-202ENST00000437995 DZIP3Q86Y13 1208 aaKnown RBP25.51■■□□□ 1.67
SURF1-202ENST00000437995 LAS1LQ9Y4W2 734 aaKnown RBP25.51■■□□□ 1.67
SURF1-202ENST00000437995 CAMTA2O94983 1202 aa25.5■■□□□ 1.67
SURF1-202ENST00000437995 BCORQ6W2J9 1755 aa25.5■■□□□ 1.67
SURF1-202ENST00000437995 PXDNLA1KZ92 1463 aa25.49■■□□□ 1.67
SURF1-202ENST00000437995 TGFB2P61812 414 aa25.49■■□□□ 1.67
SURF1-202ENST00000437995 KIAA1551Q9HCM1 1747 aa25.49■■□□□ 1.67
SURF1-202ENST00000437995 YBX3P16989 372 aaKnown RBP eCLIP25.47■■□□□ 1.677e-6■■■□□ 18.6
SURF1-202ENST00000437995 CFAP44Q96MT7 982 aa25.47■■□□□ 1.67
SURF1-202ENST00000437995 AFDNP55196 1824 aaKnown RBP25.47■■□□□ 1.67
SURF1-202ENST00000437995 NRXN2Q9P2S2 1712 aa25.46■■□□□ 1.67
SURF1-202ENST00000437995 ERBB4Q15303 1308 aa25.46■■□□□ 1.67
SURF1-202ENST00000437995 CALD1Q05682 793 aaKnown RBP25.46■■□□□ 1.67
SURF1-202ENST00000437995 TBC1D9BQ66K14 1250 aa25.46■■□□□ 1.67
SURF1-202ENST00000437995 BICDL1Q6ZP65 573 aa25.46■■□□□ 1.67
SURF1-202ENST00000437995 SERPINB2P05120 415 aa25.45■■□□□ 1.66
SURF1-202ENST00000437995 N4BP2Q86UW6 1770 aaPredicted RBP25.45■■□□□ 1.66
SURF1-202ENST00000437995 GRIN3BO60391 1043 aa25.44■■□□□ 1.66
SURF1-202ENST00000437995 A0A0G2JLW4 131 aa25.43■■□□□ 1.66
SURF1-202ENST00000437995 RGL2O15211 777 aa25.43■■□□□ 1.66
SURF1-202ENST00000437995 CLEC4GQ6UXB4 293 aa25.43■■□□□ 1.66
SURF1-202ENST00000437995 IFT57Q9NWB7 429 aa25.43■■□□□ 1.66
SURF1-202ENST00000437995 ZNF652Q9Y2D9 606 aa25.43■■□□□ 1.66
SURF1-202ENST00000437995 CARMIL3Q8ND23 1372 aa25.43■■□□□ 1.66
SURF1-202ENST00000437995 ZNF853P0CG23 659 aa25.42■■□□□ 1.66
SURF1-202ENST00000437995 MYL6BP14649 208 aa25.42■■□□□ 1.66
SURF1-202ENST00000437995 DPEP1P16444 411 aa25.42■■□□□ 1.66
SURF1-202ENST00000437995 EIF2S2P20042 333 aaKnown RBP25.42■■□□□ 1.66
SURF1-202ENST00000437995 YY1P25490 414 aa25.42■■□□□ 1.66
SURF1-202ENST00000437995 MBIPQ9NS73 344 aa25.42■■□□□ 1.66
SURF1-202ENST00000437995 WWC3Q9ULE0 1092 aa25.42■■□□□ 1.66
SURF1-202ENST00000437995 GNAI1P63096 354 aa25.41■■□□□ 1.66
SURF1-202ENST00000437995 KRT24Q2M2I5 525 aa25.41■■□□□ 1.66
SURF1-202ENST00000437995 NGEFQ8N5V2 710 aa25.41■■□□□ 1.66
SURF1-202ENST00000437995 SETDB2Q96T68 719 aa25.41■■□□□ 1.66
SURF1-202ENST00000437995 CHD4Q14839 1912 aa25.41■■□□□ 1.66
SURF1-202ENST00000437995 CCDC27Q2M243 656 aa25.4■■□□□ 1.66
SURF1-202ENST00000437995 SENP3-EIF4A1A0A087X0R7 540 aa25.38■■□□□ 1.65
SURF1-202ENST00000437995 HOXB7P09629 217 aa25.38■■□□□ 1.65
SURF1-202ENST00000437995 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
SURF1-202ENST00000437995 KIF6Q6ZMV9 814 aa25.38■■□□□ 1.65
SURF1-202ENST00000437995 BRCA1P38398 1863 aaKnown RBP25.37■■□□□ 1.65
SURF1-202ENST00000437995 ERVV-1B6SEH8 477 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms