RNA–Protein interactions for RNA: ENST00000435024.1

LINC00460-201, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best) BASIC

Gene LINC00460, Length 631 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-201ENST00000435024 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
LINC00460-201ENST00000435024 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
LINC00460-201ENST00000435024 LINC00116Q8NCU8 138 aa10.05□□□□□ -0.8
LINC00460-201ENST00000435024 SLC16A10Q8TF71 515 aa10.05□□□□□ -0.8
LINC00460-201ENST00000435024 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
LINC00460-201ENST00000435024 SOS1Q07889 1333 aaPredicted RBP10.05□□□□□ -0.8
LINC00460-201ENST00000435024 UBR2Q8IWV8 1755 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 KCPQ6ZWJ8 1503 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 PSDA5PKW4 1024 aaPredicted RBP10.04□□□□□ -0.8
LINC00460-201ENST00000435024 E9PSI1 815 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 KCNQ3O43525 872 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 RPS6KA4O75676 772 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 PHF14O94880 888 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 HOXB7P09629 217 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 CYP19A1P11511 503 aaPredicted RBP10.04□□□□□ -0.8
LINC00460-201ENST00000435024 ARXQ96QS3 562 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 MBIPQ9NS73 344 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
LINC00460-201ENST00000435024 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
LINC00460-201ENST00000435024 KDM3BQ7LBC6 1761 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 TAF1LQ8IZX4 1826 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 ZPR1O75312 459 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 GIGYF1O75420 1035 aaPredicted RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 ZNF853P0CG23 659 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 EIF2S2P20042 333 aaKnown RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 CANXP27824 592 aaKnown RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 IL6STP40189 918 aaPredicted RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 ZNF827Q17R98 1081 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 YTHDC1Q96MU7 727 aaKnown RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 ANO8Q9HCE9 1232 aaPredicted RBP10.03□□□□□ -0.8
LINC00460-201ENST00000435024 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
LINC00460-201ENST00000435024 POLD1P28340 1107 aa10.02□□□□□ -0.81
LINC00460-201ENST00000435024 HDGFL1Q5TGJ6 251 aa10.02□□□□□ -0.81
LINC00460-201ENST00000435024 STK31Q9BXU1 1019 aa10.02□□□□□ -0.81
LINC00460-201ENST00000435024 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
LINC00460-201ENST00000435024 CICQ96RK0 1608 aaPredicted RBP10.02□□□□□ -0.81
LINC00460-201ENST00000435024 CCDC30Q5VVM6 783 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 DUSP27Q5VZP5 1158 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 MTFR1LQ9H019 292 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 SPON1Q9HCB6 807 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 ZNF652Q9Y2D9 606 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 ZBTB1Q9Y2K1 713 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 USP16Q9Y5T5 823 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 COL5A3P25940 1745 aaPredicted RBP10.01□□□□□ -0.81
LINC00460-201ENST00000435024 TJP1Q07157 1748 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 PNPLA7Q6ZV29 1317 aa10.01□□□□□ -0.81
LINC00460-201ENST00000435024 ELL2O00472 640 aaPredicted RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 A1BGP04217 495 aa10□□□□□ -0.81
LINC00460-201ENST00000435024 TWISTNBQ3B726 338 aaPredicted RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 INTS5Q6P9B9 1019 aaKnown RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 KIF6Q6ZMV9 814 aa10□□□□□ -0.81
LINC00460-201ENST00000435024 COL23A1Q86Y22 540 aaPredicted RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 NLGN1Q8N2Q7 840 aa10□□□□□ -0.81
LINC00460-201ENST00000435024 ARHGEF1Q92888 912 aaKnown RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 TSR2Q969E8 191 aaKnown RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 DBF4Q9UBU7 674 aaPredicted RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 PPP1R1BQ9UD71 204 aaPredicted RBP10□□□□□ -0.81
LINC00460-201ENST00000435024 FANCIQ9NVI1 1328 aa10□□□□□ -0.81
LINC00460-201ENST00000435024 COL15A1P39059 1388 aa10□□□□□ -0.81
LINC00460-201ENST00000435024 QSER1Q2KHR3 1735 aa9.99□□□□□ -0.81
LINC00460-201ENST00000435024 LAMB4A4D0S4 1761 aa9.99□□□□□ -0.81
LINC00460-201ENST00000435024 MYL6BP14649 208 aa9.99□□□□□ -0.81
LINC00460-201ENST00000435024 HYPKQ9NX55 129 aa9.99□□□□□ -0.81
LINC00460-201ENST00000435024 PRAMEF22A3QJZ6 481 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 NPHP1O15259 732 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 ZBTB7AO95365 584 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 EIF5P55010 431 aaKnown RBP9.98□□□□□ -0.81
LINC00460-201ENST00000435024 EXOSC9Q06265 439 aaKnown RBP9.98□□□□□ -0.81
LINC00460-201ENST00000435024 DZIP3Q86Y13 1208 aaKnown RBP9.98□□□□□ -0.81
LINC00460-201ENST00000435024 NECTIN2Q92692 538 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 ZNF428Q96B54 188 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 DDX21Q9NR30 783 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC00460-201ENST00000435024 NARFQ9UHQ1 456 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 ZBED9Q6R2W3 1325 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 ZNF521Q96K83 1311 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 UBR3Q6ZT12 1888 aa9.98□□□□□ -0.81
LINC00460-201ENST00000435024 SRCAPQ6ZRS2 3230 aa9.97□□□□□ -0.81
LINC00460-201ENST00000435024 DDX58O95786 925 aaKnown RBP9.97□□□□□ -0.81
LINC00460-201ENST00000435024 CT47B1P0C2W7 299 aaPredicted RBP9.97□□□□□ -0.81
LINC00460-201ENST00000435024 SLFN5Q08AF3 891 aa9.97□□□□□ -0.81
LINC00460-201ENST00000435024 C8orf58Q8NAV2 365 aa9.97□□□□□ -0.81
LINC00460-201ENST00000435024 ATF5Q9Y2D1 282 aaPredicted RBP9.97□□□□□ -0.81
LINC00460-201ENST00000435024 RGL2O15211 777 aa9.96□□□□□ -0.82
LINC00460-201ENST00000435024 KRT24Q2M2I5 525 aa9.96□□□□□ -0.82
LINC00460-201ENST00000435024 HSP90AB3PQ58FF7 597 aa9.96□□□□□ -0.82
LINC00460-201ENST00000435024 CHPF2Q9P2E5 772 aa9.96□□□□□ -0.82
LINC00460-201ENST00000435024 TBC1D2BQ9UPU7 963 aa9.96□□□□□ -0.82
LINC00460-201ENST00000435024 PARP3Q9Y6F1 533 aa9.96□□□□□ -0.82
LINC00460-201ENST00000435024 USP42Q9H9J4 1324 aaKnown RBP9.96□□□□□ -0.82
LINC00460-201ENST00000435024 MYH14Q7Z406 1995 aaKnown RBP9.95□□□□□ -0.82
LINC00460-201ENST00000435024 ERVV-1B6SEH8 477 aa9.95□□□□□ -0.82
LINC00460-201ENST00000435024 PIP4K2AP48426 406 aaPredicted RBP9.95□□□□□ -0.82
LINC00460-201ENST00000435024 AIMP1Q12904 312 aaKnown RBP9.95□□□□□ -0.82
LINC00460-201ENST00000435024 USPL1Q5W0Q7 1092 aa9.95□□□□□ -0.82
LINC00460-201ENST00000435024 CLEC4GQ6UXB4 293 aa9.95□□□□□ -0.82
LINC00460-201ENST00000435024 TUBGCP6Q96RT7 1819 aa9.94□□□□□ -0.82
LINC00460-201ENST00000435024 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
LINC00460-201ENST00000435024 SLC4A2P04920 1241 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms