RNA–Protein interactions for RNA: ENST00000434013.6

NPC2-202, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 2 BASIC

Gene NPC2, Length 875 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-202ENST00000434013 KLHL34Q8N239 644 aa14.34□□□□□ -0.11
NPC2-202ENST00000434013 FMNL2Q96PY5 1086 aa14.34□□□□□ -0.11
NPC2-202ENST00000434013 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
NPC2-202ENST00000434013 VSIG10Q8N0Z9 540 aa14.33□□□□□ -0.12
NPC2-202ENST00000434013 ZNF496Q96IT1 587 aaPredicted RBP14.33□□□□□ -0.12
NPC2-202ENST00000434013 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
NPC2-202ENST00000434013 HEG1Q9ULI3 1381 aa14.33□□□□□ -0.12
NPC2-202ENST00000434013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.32□□□□□ -0.12
NPC2-202ENST00000434013 GNPATO15228 680 aa14.32□□□□□ -0.12
NPC2-202ENST00000434013 KCNQ3O43525 872 aa14.32□□□□□ -0.12
NPC2-202ENST00000434013 DNAJC10Q8IXB1 793 aa14.32□□□□□ -0.12
NPC2-202ENST00000434013 MIER1Q8N108 512 aa14.32□□□□□ -0.12
NPC2-202ENST00000434013 MIS18AQ9NYP9 233 aa14.32□□□□□ -0.12
NPC2-202ENST00000434013 CNTNAP4Q9C0A0 1308 aa14.32□□□□□ -0.12
NPC2-202ENST00000434013 UBR3Q6ZT12 1888 aa14.31□□□□□ -0.12
NPC2-202ENST00000434013 PHF14O94880 888 aa14.31□□□□□ -0.12
NPC2-202ENST00000434013 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
NPC2-202ENST00000434013 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
NPC2-202ENST00000434013 CRKLP46109 303 aaKnown RBP14.3□□□□□ -0.12
NPC2-202ENST00000434013 CALD1Q05682 793 aaKnown RBP14.3□□□□□ -0.12
NPC2-202ENST00000434013 RC3H1Q5TC82 1133 aaKnown RBP14.3□□□□□ -0.12
NPC2-202ENST00000434013 MSL1Q68DK7 614 aa14.3□□□□□ -0.12
NPC2-202ENST00000434013 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
NPC2-202ENST00000434013 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
NPC2-202ENST00000434013 LAS1LQ9Y4W2 734 aaKnown RBP14.3□□□□□ -0.12
NPC2-202ENST00000434013 STARD3NLO95772 234 aa14.29□□□□□ -0.12
NPC2-202ENST00000434013 TEX13AQ9BXU3 409 aaPredicted RBP14.29□□□□□ -0.12
NPC2-202ENST00000434013 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
NPC2-202ENST00000434013 RTCBQ9Y3I0 505 aaKnown RBP14.29□□□□□ -0.12
NPC2-202ENST00000434013 SNRPA1P09661 255 aaKnown RBP14.28□□□□□ -0.12
NPC2-202ENST00000434013 CYP19A1P11511 503 aaPredicted RBP14.28□□□□□ -0.12
NPC2-202ENST00000434013 CCDC87Q9NVE4 849 aa14.28□□□□□ -0.12
NPC2-202ENST00000434013 MYH14Q7Z406 1995 aaKnown RBP14.27□□□□□ -0.12
NPC2-202ENST00000434013 LAMB4A4D0S4 1761 aa14.27□□□□□ -0.12
NPC2-202ENST00000434013 TGFB2P61812 414 aa14.27□□□□□ -0.13
NPC2-202ENST00000434013 CCDC27Q2M243 656 aa14.27□□□□□ -0.13
NPC2-202ENST00000434013 GPBP1L1Q9HC44 474 aaPredicted RBP14.27□□□□□ -0.13
NPC2-202ENST00000434013 SALL2Q9Y467 1007 aaPredicted RBP14.27□□□□□ -0.13
NPC2-202ENST00000434013 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
NPC2-202ENST00000434013 EIF4A1P60842 406 aaKnown RBP14.26□□□□□ -0.13
NPC2-202ENST00000434013 INTS5Q6P9B9 1019 aaKnown RBP14.26□□□□□ -0.13
NPC2-202ENST00000434013 SMIM5Q71RC9 77 aa14.26□□□□□ -0.13
NPC2-202ENST00000434013 NLGN1Q8N2Q7 840 aa14.26□□□□□ -0.13
NPC2-202ENST00000434013 IFT57Q9NWB7 429 aa14.26□□□□□ -0.13
NPC2-202ENST00000434013 CHL1O00533 1208 aa14.25□□□□□ -0.13
NPC2-202ENST00000434013 GNAI1P63096 354 aa14.25□□□□□ -0.13
NPC2-202ENST00000434013 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
NPC2-202ENST00000434013 WWC1Q8IX03 1113 aa14.25□□□□□ -0.13
NPC2-202ENST00000434013 CFAP44Q96MT7 982 aa14.25□□□□□ -0.13
NPC2-202ENST00000434013 ZBTB1Q9Y2K1 713 aa14.25□□□□□ -0.13
NPC2-202ENST00000434013 C10orf71Q711Q0 1435 aa14.24□□□□□ -0.13
NPC2-202ENST00000434013 C4AP0C0L4 1744 aa14.24□□□□□ -0.13
NPC2-202ENST00000434013 SOS1Q07889 1333 aaPredicted RBP14.24□□□□□ -0.13
NPC2-202ENST00000434013 PRAMEF22A3QJZ6 481 aa14.24□□□□□ -0.13
NPC2-202ENST00000434013 CANXP27824 592 aaKnown RBP14.24□□□□□ -0.13
NPC2-202ENST00000434013 TRAPPC3LQ5T215 181 aa14.24□□□□□ -0.13
NPC2-202ENST00000434013 NGEFQ8N5V2 710 aa14.24□□□□□ -0.13
NPC2-202ENST00000434013 COL15A1P39059 1388 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 A1BGP04217 495 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 HSPA6P17066 643 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 RFC4P35249 363 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 MBIPQ9NS73 344 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 ZNF330Q9Y3S2 320 aaPredicted RBP14.23□□□□□ -0.13
NPC2-202ENST00000434013 USP16Q9Y5T5 823 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 PXDNLA1KZ92 1463 aa14.23□□□□□ -0.13
NPC2-202ENST00000434013 MMP10P09238 476 aa14.22□□□□□ -0.13
NPC2-202ENST00000434013 ZNF853P0CG23 659 aa14.22□□□□□ -0.13
NPC2-202ENST00000434013 NPM2Q86SE8 214 aaKnown RBP14.22□□□□□ -0.13
NPC2-202ENST00000434013 ARHGEF1Q92888 912 aaKnown RBP14.22□□□□□ -0.13
NPC2-202ENST00000434013 IL16Q14005 1332 aa14.21□□□□□ -0.13
NPC2-202ENST00000434013 A0A087WZG4 1122 aa14.2□□□□□ -0.14
NPC2-202ENST00000434013 IL6STP40189 918 aaPredicted RBP14.2□□□□□ -0.14
NPC2-202ENST00000434013 PIP4K2AP48426 406 aaPredicted RBP14.2□□□□□ -0.14
NPC2-202ENST00000434013 IFFO2Q5TF58 517 aa14.2□□□□□ -0.14
NPC2-202ENST00000434013 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
NPC2-202ENST00000434013 CEP350Q5VT06 3117 aa14.2□□□□□ -0.14
NPC2-202ENST00000434013 USP42Q9H9J4 1324 aaKnown RBP14.19□□□□□ -0.14
NPC2-202ENST00000434013 KIF3CO14782 793 aa14.19□□□□□ -0.14
NPC2-202ENST00000434013 ZPR1O75312 459 aa14.19□□□□□ -0.14
NPC2-202ENST00000434013 GYS1P13807 737 aa14.19□□□□□ -0.14
NPC2-202ENST00000434013 EIF5P55010 431 aaKnown RBP14.19□□□□□ -0.14
NPC2-202ENST00000434013 KRT24Q2M2I5 525 aa14.19□□□□□ -0.14
NPC2-202ENST00000434013 HOXB7P09629 217 aa14.18□□□□□ -0.14
NPC2-202ENST00000434013 EIF2S2P20042 333 aaKnown RBP14.18□□□□□ -0.14
NPC2-202ENST00000434013 TSR2Q969E8 191 aaKnown RBP14.18□□□□□ -0.14
NPC2-202ENST00000434013 SRP68Q9UHB9 627 aaKnown RBP14.18□□□□□ -0.14
NPC2-202ENST00000434013 ERBB4Q15303 1308 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 SCN7AQ01118 1682 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 NBPF26B4DH59 902 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 DUSP27Q5VZP5 1158 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 NBPF10Q6P3W6 841 aaKnown RBP14.17□□□□□ -0.14
NPC2-202ENST00000434013 NBPF15Q8N660 670 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 NARFQ9UHQ1 456 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 KIF13BQ9NQT8 1826 aa14.17□□□□□ -0.14
NPC2-202ENST00000434013 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
NPC2-202ENST00000434013 MYL6BP14649 208 aa14.16□□□□□ -0.14
NPC2-202ENST00000434013 HDGFL1Q5TGJ6 251 aa14.16□□□□□ -0.14
NPC2-202ENST00000434013 USPL1Q5W0Q7 1092 aa14.16□□□□□ -0.14
NPC2-202ENST00000434013 DZIP3Q86Y13 1208 aaKnown RBP14.16□□□□□ -0.14
NPC2-202ENST00000434013 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms