RNA–Protein interactions for RNA: ENST00000433619.2

FAM3A-211, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-211ENST00000433619 LMOD3Q0VAK6 560 aa25.34■■□□□ 1.65
FAM3A-211ENST00000433619 NLGN1Q8N2Q7 840 aa25.33■■□□□ 1.65
FAM3A-211ENST00000433619 MIS18AQ9NYP9 233 aa25.33■■□□□ 1.65
FAM3A-211ENST00000433619 SOS1Q07889 1333 aaPredicted RBP25.33■■□□□ 1.64
FAM3A-211ENST00000433619 ZBTB1Q9Y2K1 713 aa25.32■■□□□ 1.64
FAM3A-211ENST00000433619 SNRPA1P09661 255 aaKnown RBP25.31■■□□□ 1.64
FAM3A-211ENST00000433619 RRP7AQ9Y3A4 280 aaKnown RBP25.31■■□□□ 1.64
FAM3A-211ENST00000433619 GYS1P13807 737 aa25.3■■□□□ 1.64
FAM3A-211ENST00000433619 NEUROD2Q15784 382 aa25.3■■□□□ 1.64
FAM3A-211ENST00000433619 TRIM35Q9UPQ4 493 aa25.29■■□□□ 1.64
FAM3A-211ENST00000433619 USP16Q9Y5T5 823 aa25.29■■□□□ 1.64
FAM3A-211ENST00000433619 CANXP27824 592 aaKnown RBP25.28■■□□□ 1.64
FAM3A-211ENST00000433619 EIF5P55010 431 aaKnown RBP25.28■■□□□ 1.64
FAM3A-211ENST00000433619 BABAM1Q9NWV8 329 aa25.28■■□□□ 1.64
FAM3A-211ENST00000433619 USP42Q9H9J4 1324 aaKnown RBP25.28■■□□□ 1.64
FAM3A-211ENST00000433619 A1BGP04217 495 aa25.27■■□□□ 1.64
FAM3A-211ENST00000433619 PRAMEF22A3QJZ6 481 aa25.26■■□□□ 1.63
FAM3A-211ENST00000433619 EIF4A1P60842 406 aaKnown RBP25.26■■□□□ 1.63
FAM3A-211ENST00000433619 MRS2Q9HD23 443 aa25.26■■□□□ 1.63
FAM3A-211ENST00000433619 SRP68Q9UHB9 627 aaKnown RBP25.26■■□□□ 1.63
FAM3A-211ENST00000433619 APAF1O14727 1248 aa25.25■■□□□ 1.63
FAM3A-211ENST00000433619 MMP10P09238 476 aa25.25■■□□□ 1.63
FAM3A-211ENST00000433619 IL6STP40189 918 aaPredicted RBP25.25■■□□□ 1.63
FAM3A-211ENST00000433619 NARFQ9UHQ1 456 aa25.25■■□□□ 1.63
FAM3A-211ENST00000433619 CD2APQ9Y5K6 639 aa25.25■■□□□ 1.63
FAM3A-211ENST00000433619 C4AP0C0L4 1744 aa25.25■■□□□ 1.63
FAM3A-211ENST00000433619 COL15A1P39059 1388 aa25.24■■□□□ 1.63
FAM3A-211ENST00000433619 ZPR1O75312 459 aa25.24■■□□□ 1.63
FAM3A-211ENST00000433619 KDM3BQ7LBC6 1761 aa25.23■■□□□ 1.63
FAM3A-211ENST00000433619 A0A087WZG4 1122 aa25.23■■□□□ 1.63
FAM3A-211ENST00000433619 GIGYF1O75420 1035 aaPredicted RBP25.23■■□□□ 1.63
FAM3A-211ENST00000433619 KLHL34Q8N239 644 aa25.23■■□□□ 1.63
FAM3A-211ENST00000433619 FKBP8Q14318 412 aa25.22■■□□□ 1.63
FAM3A-211ENST00000433619 USPL1Q5W0Q7 1092 aa25.22■■□□□ 1.63
FAM3A-211ENST00000433619 TSPYL4Q9UJ04 414 aa25.22■■□□□ 1.63
FAM3A-211ENST00000433619 DCAF8L1A6NGE4 600 aa25.21■■□□□ 1.63
FAM3A-211ENST00000433619 CHL1O00533 1208 aa25.2■■□□□ 1.62
FAM3A-211ENST00000433619 TM4SF1P30408 202 aa25.2■■□□□ 1.62
FAM3A-211ENST00000433619 NLGN2Q8NFZ4 835 aa25.19■■□□□ 1.62
FAM3A-211ENST00000433619 BCL2L12Q9HB09 334 aa25.18■■□□□ 1.62
FAM3A-211ENST00000433619 PARP3Q9Y6F1 533 aa25.18■■□□□ 1.62
FAM3A-211ENST00000433619 NBPF26B4DH59 902 aa25.17■■□□□ 1.62
FAM3A-211ENST00000433619 NBPF10Q6P3W6 841 aaKnown RBP25.17■■□□□ 1.62
FAM3A-211ENST00000433619 NPM2Q86SE8 214 aaKnown RBP25.17■■□□□ 1.62
FAM3A-211ENST00000433619 NBPF15Q8N660 670 aa25.17■■□□□ 1.62
FAM3A-211ENST00000433619 TBC1D2BQ9UPU7 963 aa25.16■■□□□ 1.62
FAM3A-211ENST00000433619 PIP4K2AP48426 406 aaPredicted RBP25.15■■□□□ 1.62
FAM3A-211ENST00000433619 CFAP44Q96MT7 982 aa25.15■■□□□ 1.62
FAM3A-211ENST00000433619 ZNF330Q9Y3S2 320 aaPredicted RBP25.15■■□□□ 1.62
FAM3A-211ENST00000433619 DDR1Q08345 913 aa25.14■■□□□ 1.62
FAM3A-211ENST00000433619 NFIXQ14938 502 aa25.13■■□□□ 1.61
FAM3A-211ENST00000433619 NCBP3Q53F19 620 aaKnown RBP25.13■■□□□ 1.61
FAM3A-211ENST00000433619 LAS1LQ9Y4W2 734 aaKnown RBP25.13■■□□□ 1.61
FAM3A-211ENST00000433619 POLRMTO00411 1230 aaKnown RBP25.12■■□□□ 1.61
FAM3A-211ENST00000433619 ZNF853P0CG23 659 aa25.12■■□□□ 1.61
FAM3A-211ENST00000433619 CALD1Q05682 793 aaKnown RBP25.12■■□□□ 1.61
FAM3A-211ENST00000433619 DZIP3Q86Y13 1208 aaKnown RBP25.12■■□□□ 1.61
FAM3A-211ENST00000433619 CAMTA2O94983 1202 aa25.11■■□□□ 1.61
FAM3A-211ENST00000433619 CCDC27Q2M243 656 aa25.11■■□□□ 1.61
FAM3A-211ENST00000433619 TGFB2P61812 414 aa25.1■■□□□ 1.61
FAM3A-211ENST00000433619 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
FAM3A-211ENST00000433619 GPR162Q16538 588 aa25.09■■□□□ 1.61
FAM3A-211ENST00000433619 IFT57Q9NWB7 429 aa25.09■■□□□ 1.61
FAM3A-211ENST00000433619 ERBB4Q15303 1308 aa25.09■■□□□ 1.61
FAM3A-211ENST00000433619 RGL2O15211 777 aa25.08■■□□□ 1.61
FAM3A-211ENST00000433619 GNAI1P63096 354 aa25.08■■□□□ 1.61
FAM3A-211ENST00000433619 CLEC4GQ6UXB4 293 aa25.08■■□□□ 1.61
FAM3A-211ENST00000433619 C10orf71Q711Q0 1435 aa25.08■■□□□ 1.61
FAM3A-211ENST00000433619 KIF13BQ9NQT8 1826 aa25.07■■□□□ 1.6
FAM3A-211ENST00000433619 TBC1D9BQ66K14 1250 aa25.07■■□□□ 1.6
FAM3A-211ENST00000433619 MBIPQ9NS73 344 aa25.07■■□□□ 1.6
FAM3A-211ENST00000433619 SERPINB2P05120 415 aa25.06■■□□□ 1.6
FAM3A-211ENST00000433619 WWC1Q8IX03 1113 aa25.06■■□□□ 1.6
FAM3A-211ENST00000433619 EIF2S2P20042 333 aaKnown RBP25.05■■□□□ 1.6
FAM3A-211ENST00000433619 KRT24Q2M2I5 525 aa25.05■■□□□ 1.6
FAM3A-211ENST00000433619 FAM9BQ8IZU0 186 aa25.05■■□□□ 1.6
FAM3A-211ENST00000433619 HOXB7P09629 217 aa25.04■■□□□ 1.6
FAM3A-211ENST00000433619 PDIA6Q15084 440 aa25.04■■□□□ 1.6
FAM3A-211ENST00000433619 BICDL1Q6ZP65 573 aa25.04■■□□□ 1.6
FAM3A-211ENST00000433619 SCN7AQ01118 1682 aa25.04■■□□□ 1.6
FAM3A-211ENST00000433619 MYL6BP14649 208 aa25.03■■□□□ 1.6
FAM3A-211ENST00000433619 SETDB2Q96T68 719 aa25.03■■□□□ 1.6
FAM3A-211ENST00000433619 ZNF652Q9Y2D9 606 aa25.03■■□□□ 1.6
FAM3A-211ENST00000433619 A0A0G2JLW4 131 aa25.02■■□□□ 1.6
FAM3A-211ENST00000433619 ERVV-1B6SEH8 477 aa25.02■■□□□ 1.6
FAM3A-211ENST00000433619 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
FAM3A-211ENST00000433619 LRP10Q7Z4F1 713 aa25.02■■□□□ 1.6
FAM3A-211ENST00000433619 PELP1Q8IZL8 1130 aaKnown RBP25.02■■□□□ 1.6
FAM3A-211ENST00000433619 NGEFQ8N5V2 710 aa25.02■■□□□ 1.6
FAM3A-211ENST00000433619 PXDNLA1KZ92 1463 aa25.02■■□□□ 1.6
FAM3A-211ENST00000433619 NRXN2Q9P2S2 1712 aa25.01■■□□□ 1.59
FAM3A-211ENST00000433619 SENP3-EIF4A1A0A087X0R7 540 aa25.01■■□□□ 1.59
FAM3A-211ENST00000433619 GRIN3BO60391 1043 aa25.01■■□□□ 1.59
FAM3A-211ENST00000433619 DPEP1P16444 411 aa25■■□□□ 1.59
FAM3A-211ENST00000433619 KCNA3P22001 575 aa25■■□□□ 1.59
FAM3A-211ENST00000433619 DUSP27Q5VZP5 1158 aa25■■□□□ 1.59
FAM3A-211ENST00000433619 TTLL7Q6ZT98 887 aa25■■□□□ 1.59
FAM3A-211ENST00000433619 BCORQ6W2J9 1755 aa25■■□□□ 1.59
FAM3A-211ENST00000433619 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
FAM3A-211ENST00000433619 IL16Q14005 1332 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms