RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 FLT3P36888 993 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 MRPL12P52815 198 aaKnown RBP12.83□□□□□ -0.36
CCDC171-202ENST00000432954 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
CCDC171-202ENST00000432954 TAX1BP1Q86VP1 789 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 TRIM42Q8IWZ5 723 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 BICD1Q96G01 975 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 TMOD4Q9NZQ9 345 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
CCDC171-202ENST00000432954 H7C1W4 665 aa12.82□□□□□ -0.36
CCDC171-202ENST00000432954 KIF2AO00139 706 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-202ENST00000432954 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-202ENST00000432954 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
CCDC171-202ENST00000432954 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
CCDC171-202ENST00000432954 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
CCDC171-202ENST00000432954 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-202ENST00000432954 TEKT1Q969V4 418 aa12.82□□□□□ -0.36
CCDC171-202ENST00000432954 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
CCDC171-202ENST00000432954 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
CCDC171-202ENST00000432954 PPFIA4O75335 1185 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 RAB27AP51159 221 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 ANKRD18AQ8IVF6 992 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 EXOC4Q96A65 974 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 UBXN6Q9BZV1 441 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
CCDC171-202ENST00000432954 A0A087WUV0 522 aaPredicted RBP12.81□□□□□ -0.36
CCDC171-202ENST00000432954 ACBD5Q5T8D3 534 aaPredicted RBP12.81□□□□□ -0.36
CCDC171-202ENST00000432954 FBXO38Q6PIJ6 1188 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 TADA2BQ86TJ2 420 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
CCDC171-202ENST00000432954 CC2D2AQ9P2K1 1620 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 GOLGA3Q08378 1498 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 EME2A4GXA9 379 aaPredicted RBP12.8□□□□□ -0.36
CCDC171-202ENST00000432954 PLA2G4AP47712 749 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 LRRC31Q6UY01 552 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 CTCFLQ8NI51 663 aaPredicted RBP12.8□□□□□ -0.36
CCDC171-202ENST00000432954 PMFBP1Q8TBY8 1022 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 TBC1D5Q92609 795 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 SRRTQ9BXP5 876 aaKnown RBP12.8□□□□□ -0.36
CCDC171-202ENST00000432954 KDRP35968 1356 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 MARCH6O60337 910 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 SUGT1Q9Y2Z0 365 aa12.8□□□□□ -0.36
CCDC171-202ENST00000432954 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
CCDC171-202ENST00000432954 CAPN15O75808 1086 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 ZNF24P17028 368 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 TPP2P29144 1249 aaPredicted RBP12.79□□□□□ -0.36
CCDC171-202ENST00000432954 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
CCDC171-202ENST00000432954 KIF5CO60282 957 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 PYGLP06737 847 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 SFSWAPQ12872 951 aaKnown RBP12.79□□□□□ -0.36
CCDC171-202ENST00000432954 TMED1Q13445 227 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 C17orf53Q8N3J3 647 aaPredicted RBP12.79□□□□□ -0.36
CCDC171-202ENST00000432954 TCP11Q8WWU5 503 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
CCDC171-202ENST00000432954 NCOA1Q15788 1441 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 SHTN1A0MZ66 631 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 ATP8B1O43520 1251 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 PYGBP11216 843 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 VCAM1P19320 739 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 EIF5P55010 431 aaKnown RBP12.78□□□□□ -0.36
CCDC171-202ENST00000432954 ST5P78524 1137 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
CCDC171-202ENST00000432954 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
CCDC171-202ENST00000432954 SPATA21Q7Z572 469 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 CCDC112Q8NEF3 446 aa12.78□□□□□ -0.36
CCDC171-202ENST00000432954 KIF4AO95239 1232 aa12.77□□□□□ -0.36
CCDC171-202ENST00000432954 DDR1Q08345 913 aa12.77□□□□□ -0.36
CCDC171-202ENST00000432954 C3orf20Q8ND61 904 aa12.77□□□□□ -0.36
CCDC171-202ENST00000432954 FAM107BQ9H098 131 aa12.77□□□□□ -0.36
CCDC171-202ENST00000432954 UNC45AQ9H3U1 944 aa12.77□□□□□ -0.36
CCDC171-202ENST00000432954 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.36
CCDC171-202ENST00000432954 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.36
CCDC171-202ENST00000432954 MKRN1Q9UHC7 482 aaKnown RBP12.77□□□□□ -0.36
CCDC171-202ENST00000432954 MYL1P05976 194 aa12.77□□□□□ -0.37
CCDC171-202ENST00000432954 H2AFXP16104 143 aaPredicted RBP12.77□□□□□ -0.37
CCDC171-202ENST00000432954 HNRNPH1P31943 449 aaKnown RBP12.77□□□□□ -0.37
CCDC171-202ENST00000432954 DEUP1Q05D60 604 aa12.77□□□□□ -0.37
CCDC171-202ENST00000432954 ARMC3Q5W041 872 aa12.77□□□□□ -0.37
CCDC171-202ENST00000432954 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.37
CCDC171-202ENST00000432954 RETREG1Q9H6L5 497 aa12.77□□□□□ -0.37
CCDC171-202ENST00000432954 TRPV5Q9NQA5 729 aa12.77□□□□□ -0.37
CCDC171-202ENST00000432954 TIMM44O43615 452 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 VDRP11473 427 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 GPTP24298 496 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 REXO1L1PQ8IX06 675 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 GTF3C6Q969F1 213 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 MRFAP1L1Q96HT8 127 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 TTC12Q9H892 705 aaPredicted RBP12.76□□□□□ -0.37
CCDC171-202ENST00000432954 PNMA6AP0CW24 399 aaPredicted RBP12.76□□□□□ -0.37
CCDC171-202ENST00000432954 RLBP1P12271 317 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 NF2P35240 595 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 DBN1Q16643 649 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 SFMBT2Q5VUG0 894 aa12.76□□□□□ -0.37
CCDC171-202ENST00000432954 CPLX2Q6PUV4 134 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms