RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 RARSP54136 660 aaKnown RBP13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 TOM1L2Q6ZVM7 507 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 NEBLO76041 1014 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 HLTFQ14527 1009 aaKnown RBP eCLIP13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 HFM1A2PYH4 1435 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 ANAPC15P60006 121 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 RTEL1-TNFRSF6BF6WH68 1400 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 DESP17661 470 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 LIG1P18858 919 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 CCDC144CPQ8IYA2 1237 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 FSIP1Q8NA03 581 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 TBC1D9Q6ZT07 1266 aa13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
RIMKLA-202ENST00000431473 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.23
RIMKLA-202ENST00000431473 RPAP2Q8IXW5 612 aaPredicted RBP13.58□□□□□ -0.23
RIMKLA-202ENST00000431473 FAM107BQ9H098 131 aa13.58□□□□□ -0.23
RIMKLA-202ENST00000431473 EFCAB5A4FU69 1503 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 TSG101Q99816 390 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 GLRX3O76003 335 aaKnown RBP13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 TFIP11Q9UBB9 837 aaKnown RBP13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 ZBTB9Q96C00 473 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 JADE2Q9NQC1 790 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 LIMCH1Q9UPQ0 1083 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 AQRO60306 1485 aaKnown RBP eCLIP13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 GCOM1H8Y6P7 765 aaPredicted RBP13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 CTAGE5O15320 804 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 MYZAPP0CAP1 466 aa13.58□□□□□ -0.24
RIMKLA-202ENST00000431473 PCF11O94913 1555 aaKnown RBP13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 PPFIA3O75145 1194 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 FCHSD2O94868 740 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 GOLGA8BA8MQT2 603 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 METTL24Q5JXM2 366 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 SPECC1Q5M775 1068 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 TSHZ3Q63HK5 1081 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 FAM135AQ9P2D6 1515 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 TDRD12Q587J7 1177 aaKnown RBP13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 SMARCC1Q92922 1105 aaPredicted RBP13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 STX6O43752 255 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 GSDMDP57764 484 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 CEP63Q96MT8 703 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
RIMKLA-202ENST00000431473 BAG4O95429 457 aaKnown RBP13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 SLC12A7Q9Y666 1083 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 DAPK1P53355 1430 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 F6X3S4 739 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 YEATS4O95619 227 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 MAATS1Q7Z4T9 603 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 PAFAH1B1P43034 410 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 GIMAP6Q6P9H5 292 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 CC2D2AQ9P2K1 1620 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 CCDC175P0C221 793 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 NAPBQ9H115 298 aa13.56□□□□□ -0.24
RIMKLA-202ENST00000431473 PRPF4BQ13523 1007 aaKnown RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 POLR3DP05423 398 aaPredicted RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 LRPPRCP42704 1394 aaKnown RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 HCLS1P14317 486 aaPredicted RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 CCDC97Q96F63 343 aaPredicted RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 ALS2CR12Q96Q35 445 aa13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 PAXBP1Q9Y5B6 917 aa13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 BICDL1Q6ZP65 573 aa13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 UBE2HP62256 183 aa13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
RIMKLA-202ENST00000431473 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 NEMFO60524 1076 aa13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 TRIM27P14373 513 aa13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 IGHMBP2P38935 993 aaKnown RBP13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 CCDC12Q8WUD4 166 aaPredicted RBP13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 ZNF165P49910 485 aa13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 MNAT1P51948 309 aa13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 PANK2Q9BZ23 570 aa13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 CETN2P41208 172 aa13.54□□□□□ -0.24
RIMKLA-202ENST00000431473 TMCO5BA8MYB1 307 aa13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 RANBP6O60518 1105 aaKnown RBP13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 SMC1AQ14683 1233 aaKnown RBP13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 MCM5P33992 734 aa13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 HSP90AA4PQ58FG1 418 aa13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 POTEB2H3BUK9 544 aa13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 FGFR1OPO95684 399 aaKnown RBP13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 HMGB1P09429 215 aaKnown RBP13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 LARP1Q6PKG0 1096 aaKnown RBP13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 MKNK2Q9HBH9 465 aa13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 ZNF213O14771 459 aa13.53□□□□□ -0.24
RIMKLA-202ENST00000431473 TOP2BQ02880 1626 aa13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 ATP2C2O75185 946 aa13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 GNG11P61952 73 aa13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 DDX19AQ9NUU7 478 aaKnown RBP13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 SERPINA10Q9UK55 444 aa13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 IFIT1P09914 478 aaKnown RBP13.52□□□□□ -0.24
RIMKLA-202ENST00000431473 SETD1BQ9UPS6 1966 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms