RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 TLR1Q15399 786 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 COX20Q5RI15 118 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 C16orf46Q6P387 395 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 FBXO33Q7Z6M2 555 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 RBCK1Q9BYM8 510 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 LRFN2Q9ULH4 789 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 WASF2Q9Y6W5 498 aa5.43□□□□□ -1.54
HMGB1P27-201ENST00000431429 ANKRD33BA6NCL7 494 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 GPC1P35052 558 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 WDR4P57081 412 aaKnown RBP5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 FOXC1Q12948 553 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 FAM26DQ5JW98 314 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 TBCELQ5QJ74 424 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 SH3PXD2AQ5TCZ1 1133 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 RGL4Q8IZJ4 473 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 NBPF15Q8N660 670 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 C7orf43Q8WVR3 580 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 GRIP2Q9C0E4 1043 aa5.42□□□□□ -1.54
HMGB1P27-201ENST00000431429 FAM13AO94988 1023 aa5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 ZNF16P17020 682 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 MPSTP25325 297 aa5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 NOS2P35228 1153 aa5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 RBM25P49756 843 aaKnown RBP5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 AGBL1Q96MI9 1066 aa5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 BIN2Q9UBW5 565 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P27-201ENST00000431429 SPINT1O43278 529 aa5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 FZD6O60353 706 aa5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 RNF144AP50876 292 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 CYP4X1Q8N118 509 aa5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 HPS1Q92902 700 aa5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 FAM129BQ96TA1 746 aa5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 KIAA1522Q9P206 1035 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 STIM2Q9P246 746 aa5.4□□□□□ -1.54
HMGB1P27-201ENST00000431429 SERTM1A2A2V5 107 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 SPATA31C2B4DYI2 1134 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 EIF1AXP47813 144 aaKnown RBP5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 RTN1Q16799 776 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 C1orf53Q5VUE5 145 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 RHBDD1Q8TEB9 315 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 CHMP7Q8WUX9 453 aaPredicted RBP5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 L3MBTL2Q969R5 705 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 CITED4Q96RK1 184 aa5.39□□□□□ -1.55
HMGB1P27-201ENST00000431429 TTC24A2A3L6 582 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 TNFRSF10AO00220 468 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 ZBTB39O15060 712 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 TREHO43280 583 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 VAMP1P23763 118 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 MAPK1P28482 360 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 RELBQ01201 579 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 FMR1Q06787 632 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 DSC3Q14574 896 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 TMC7Q7Z402 723 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 ALDH16A1Q8IZ83 802 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 VTI1AQ96AJ9 217 aa5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 ZSCAN10Q96SZ4 725 aaPredicted RBP5.38□□□□□ -1.55
HMGB1P27-201ENST00000431429 E9PSI1 815 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 AVPP01185 164 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 ALKBH2Q6NS38 261 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 ZSCAN29Q8IWY8 852 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 ETFBKMTQ8IXQ9 262 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 GJD3Q8N144 294 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 ABTB2Q8N961 1025 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 ALKBH8Q96BT7 664 aaKnown RBP5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 TSEN34Q9BSV6 310 aaKnown RBP5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 BCL2L13Q9BXK5 485 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 NIFKQ9BYG3 293 aaKnown RBP5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 ZNF395Q9H8N7 513 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 BCS1LQ9Y276 419 aa5.37□□□□□ -1.55
HMGB1P27-201ENST00000431429 MEN1O00255 615 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 RGS20O76081 388 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 BRD2P25440 801 aaKnown RBP5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 TXLNAP40222 546 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 C11orf91Q3C1V1 193 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 C4orf17Q53FE4 359 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 LINC00528Q8N1L1 170 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 NLRP3Q96P20 1036 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 PHACTR1Q9C0D0 580 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 CCDC87Q9NVE4 849 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 ZDHHC3Q9NYG2 299 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 CABP1Q9NZU7 370 aa5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 DMGDHQ9UI17 866 aaKnown RBP5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 GPC6Q9Y625 555 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P27-201ENST00000431429 GPR182O15218 404 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 TAGLNQ01995 201 aaKnown RBP5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 WDR44Q5JSH3 913 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 IER5Q5VY09 327 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 RNF217Q8TC41 542 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 GIPC2Q8TF65 315 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 KLRG1Q96E93 195 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 INSM2Q96T92 566 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 CHMP3Q9Y3E7 222 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 HCN4Q9Y3Q4 1203 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 PARP3Q9Y6F1 533 aa5.35□□□□□ -1.55
HMGB1P27-201ENST00000431429 NDUFB5O43674 189 aa5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 P4HBP07237 508 aaKnown RBP5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 ATP4AP20648 1035 aa5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 CTSOP43234 321 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 SMCPP49901 116 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P27-201ENST00000431429 DGKZQ13574 1117 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms