RNA–Protein interactions for RNA: ENST00000431155.1

GRAMD4-204, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-204ENST00000431155 WDR43Q15061 677 aaKnown RBP eCLIP40.23■■■■■ 4.03
GRAMD4-204ENST00000431155 TAF7Q15545 349 aaPredicted RBP40.23■■■■■ 4.03
GRAMD4-204ENST00000431155 CD2APQ9Y5K6 639 aa40.23■■■■■ 4.03
GRAMD4-204ENST00000431155 THUMPD2Q9BTF0 503 aaKnown RBP40.22■■■■■ 4.03
GRAMD4-204ENST00000431155 TEX13AQ9BXU3 409 aaPredicted RBP40.22■■■■■ 4.03
GRAMD4-204ENST00000431155 CCDC146Q8IYE0 955 aa40.21■■■■■ 4.03
GRAMD4-204ENST00000431155 MIS18AQ9NYP9 233 aa40.21■■■■■ 4.03
GRAMD4-204ENST00000431155 COL15A1P39059 1388 aa40.19■■■■■ 4.02
GRAMD4-204ENST00000431155 PELP1Q8IZL8 1130 aaKnown RBP40.18■■■■■ 4.02
GRAMD4-204ENST00000431155 RIPK4P57078 832 aa40.17■■■■■ 4.02
GRAMD4-204ENST00000431155 FKBP8Q14318 412 aa40.17■■■■■ 4.02
GRAMD4-204ENST00000431155 GPR162Q16538 588 aa40.17■■■■■ 4.02
GRAMD4-204ENST00000431155 ADAMTS8Q9UP79 889 aa40.17■■■■■ 4.02
GRAMD4-204ENST00000431155 ZPR1O75312 459 aa40.16■■■■■ 4.02
GRAMD4-204ENST00000431155 USPL1Q5W0Q7 1092 aa40.16■■■■■ 4.02
GRAMD4-204ENST00000431155 PRAMEF22A3QJZ6 481 aa40.15■■■■■ 4.02
GRAMD4-204ENST00000431155 TMPOP42166 694 aaKnown RBP40.14■■■■■ 4.02
GRAMD4-204ENST00000431155 RRP7AQ9Y3A4 280 aaKnown RBP40.13■■■■■ 4.01
GRAMD4-204ENST00000431155 USP16Q9Y5T5 823 aa40.13■■■■■ 4.01
GRAMD4-204ENST00000431155 A1BGP04217 495 aa40.12■■■■■ 4.01
GRAMD4-204ENST00000431155 EIF5P55010 431 aaKnown RBP40.12■■■■■ 4.01
GRAMD4-204ENST00000431155 NARFQ9UHQ1 456 aa40.12■■■■■ 4.01
GRAMD4-204ENST00000431155 PARP3Q9Y6F1 533 aa40.12■■■■■ 4.01
GRAMD4-204ENST00000431155 SNRPA1P09661 255 aaKnown RBP40.11■■■■■ 4.01
GRAMD4-204ENST00000431155 PNISRQ8TF01 805 aaKnown RBP40.11■■■■■ 4.01
GRAMD4-204ENST00000431155 RUNDC1Q96C34 613 aa40.11■■■■■ 4.01
GRAMD4-204ENST00000431155 ZNF330Q9Y3S2 320 aaPredicted RBP40.11■■■■■ 4.01
GRAMD4-204ENST00000431155 NEUROD2Q15784 382 aa40.08■■■■■ 4.01
GRAMD4-204ENST00000431155 KDM3BQ7LBC6 1761 aa40.06■■■■■ 4
GRAMD4-204ENST00000431155 DDR1Q08345 913 aa40.06■■■■■ 4
GRAMD4-204ENST00000431155 UTRNP46939 3433 aa40.06■■■■■ 4
GRAMD4-204ENST00000431155 YBX3P16989 372 aaKnown RBP eCLIP40.05■■■■■ 4
GRAMD4-204ENST00000431155 YY1P25490 414 aa40.05■■■■■ 4
GRAMD4-204ENST00000431155 IL6STP40189 918 aaPredicted RBP40.05■■■■■ 4
GRAMD4-204ENST00000431155 PIP4K2AP48426 406 aaPredicted RBP40.05■■■■■ 4
GRAMD4-204ENST00000431155 BCL2L12Q9HB09 334 aa40.05■■■■■ 4
GRAMD4-204ENST00000431155 A0A087WZG4 1122 aa40.04■■■■■ 4
GRAMD4-204ENST00000431155 LMOD3Q0VAK6 560 aa40.04■■■■■ 4
GRAMD4-204ENST00000431155 C10orf71Q711Q0 1435 aa40.03■■■■■ 4
GRAMD4-204ENST00000431155 TM4SF1P30408 202 aa40.03■■■■■ 4
GRAMD4-204ENST00000431155 CCDC184Q52MB2 194 aa40.02■■■■■ 4
GRAMD4-204ENST00000431155 WWC3Q9ULE0 1092 aa40.02■■■■■ 4
GRAMD4-204ENST00000431155 TBC1D2BQ9UPU7 963 aa40.02■■■■■ 4
GRAMD4-204ENST00000431155 GOLGB1Q14789 3259 aaKnown RBP40.02■■■■■ 4
GRAMD4-204ENST00000431155 EIF4A1P60842 406 aaKnown RBP40.01■■■■■ 4
GRAMD4-204ENST00000431155 POLRMTO00411 1230 aaKnown RBP40■■■■□ 3.99
GRAMD4-204ENST00000431155 NFIXQ14938 502 aa39.99■■■■□ 3.99
GRAMD4-204ENST00000431155 NPM2Q86SE8 214 aaKnown RBP39.99■■■■□ 3.99
GRAMD4-204ENST00000431155 KIF13BQ9NQT8 1826 aa39.98■■■■□ 3.99
GRAMD4-204ENST00000431155 TSPYL4Q9UJ04 414 aa39.98■■■■□ 3.99
GRAMD4-204ENST00000431155 TRIM35Q9UPQ4 493 aa39.97■■■■□ 3.99
GRAMD4-204ENST00000431155 PXDNLA1KZ92 1463 aa39.96■■■■□ 3.99
GRAMD4-204ENST00000431155 ANP32CO43423 234 aa39.96■■■■□ 3.99
GRAMD4-204ENST00000431155 GIGYF1O75420 1035 aaPredicted RBP39.96■■■■□ 3.99
GRAMD4-204ENST00000431155 NBPF26B4DH59 902 aa39.94■■■■□ 3.98
GRAMD4-204ENST00000431155 TGFB2P61812 414 aa39.94■■■■□ 3.98
GRAMD4-204ENST00000431155 NBPF10Q6P3W6 841 aaKnown RBP39.94■■■■□ 3.98
GRAMD4-204ENST00000431155 BICDL1Q6ZP65 573 aa39.94■■■■□ 3.98
GRAMD4-204ENST00000431155 NBPF15Q8N660 670 aa39.94■■■■□ 3.98
GRAMD4-204ENST00000431155 KIAA1551Q9HCM1 1747 aa39.94■■■■□ 3.98
GRAMD4-204ENST00000431155 SCN7AQ01118 1682 aa39.93■■■■□ 3.98
GRAMD4-204ENST00000431155 A0A0G2JLW4 131 aa39.93■■■■□ 3.98
GRAMD4-204ENST00000431155 LAMB4A4D0S4 1761 aa39.92■■■■□ 3.98
GRAMD4-204ENST00000431155 GRIN3BO60391 1043 aa39.92■■■■□ 3.98
GRAMD4-204ENST00000431155 DZIP3Q86Y13 1208 aaKnown RBP39.92■■■■□ 3.98
GRAMD4-204ENST00000431155 N4BP2Q86UW6 1770 aaPredicted RBP39.91■■■■□ 3.98
GRAMD4-204ENST00000431155 CAMTA2O94983 1202 aa39.9■■■■□ 3.98
GRAMD4-204ENST00000431155 TBC1D9BQ66K14 1250 aa39.9■■■■□ 3.98
GRAMD4-204ENST00000431155 APAF1O14727 1248 aa39.89■■■■□ 3.98
GRAMD4-204ENST00000431155 DPEP1P16444 411 aa39.89■■■■□ 3.98
GRAMD4-204ENST00000431155 SERPINB2P05120 415 aa39.88■■■■□ 3.97
GRAMD4-204ENST00000431155 BABAM1Q9NWV8 329 aa39.88■■■■□ 3.97
GRAMD4-204ENST00000431155 LAS1LQ9Y4W2 734 aaKnown RBP39.86■■■■□ 3.97
GRAMD4-204ENST00000431155 CHD4Q14839 1912 aa39.85■■■■□ 3.97
GRAMD4-204ENST00000431155 AFDNP55196 1824 aaKnown RBP39.84■■■■□ 3.97
GRAMD4-204ENST00000431155 BCORQ6W2J9 1755 aa39.83■■■■□ 3.97
GRAMD4-204ENST00000431155 MRS2Q9HD23 443 aa39.83■■■■□ 3.97
GRAMD4-204ENST00000431155 NRXN2Q9P2S2 1712 aa39.82■■■■□ 3.97
GRAMD4-204ENST00000431155 CHL1O00533 1208 aa39.81■■■■□ 3.96
GRAMD4-204ENST00000431155 KCNA3P22001 575 aa39.81■■■■□ 3.96
GRAMD4-204ENST00000431155 NGEFQ8N5V2 710 aa39.81■■■■□ 3.96
GRAMD4-204ENST00000431155 CHRNA5P30532 468 aa39.79■■■■□ 3.96
GRAMD4-204ENST00000431155 BCS1LQ9Y276 419 aa39.79■■■■□ 3.96
GRAMD4-204ENST00000431155 CARMIL3Q8ND23 1372 aa39.78■■■■□ 3.96
GRAMD4-204ENST00000431155 MYL6BP14649 208 aa39.77■■■■□ 3.96
GRAMD4-204ENST00000431155 SETDB2Q96T68 719 aa39.77■■■■□ 3.96
GRAMD4-204ENST00000431155 EIF2S2P20042 333 aaKnown RBP39.76■■■■□ 3.96
GRAMD4-204ENST00000431155 ZNF652Q9Y2D9 606 aa39.75■■■■□ 3.95
GRAMD4-204ENST00000431155 KRT24Q2M2I5 525 aa39.74■■■■□ 3.95
GRAMD4-204ENST00000431155 CLEC4GQ6UXB4 293 aa39.74■■■■□ 3.95
GRAMD4-204ENST00000431155 SENP3-EIF4A1A0A087X0R7 540 aa39.73■■■■□ 3.95
GRAMD4-204ENST00000431155 CCDC24Q8N4L8 307 aa39.73■■■■□ 3.95
GRAMD4-204ENST00000431155 PIM2Q9P1W9 311 aa39.73■■■■□ 3.95
GRAMD4-204ENST00000431155 CFAP44Q96MT7 982 aa39.72■■■■□ 3.95
GRAMD4-204ENST00000431155 BRCA1P38398 1863 aaKnown RBP39.72■■■■□ 3.95
GRAMD4-204ENST00000431155 HLFQ16534 295 aa39.71■■■■□ 3.95
GRAMD4-204ENST00000431155 PRR5LQ6MZQ0 368 aa39.71■■■■□ 3.95
GRAMD4-204ENST00000431155 ERBB4Q15303 1308 aa39.7■■■■□ 3.95
GRAMD4-204ENST00000431155 TTLL7Q6ZT98 887 aa39.7■■■■□ 3.95
GRAMD4-204ENST00000431155 NECTIN2Q92692 538 aa39.7■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms