RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 FAM114A1Q8IWE2 563 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 UBXN4Q92575 508 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 UNC45AQ9H3U1 944 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 JRKLQ9Y4A0 524 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 LDHAP00338 332 aaKnown RBP6.31□□□□□ -1.4
PTPN4-203ENST00000430976 SLC7A5Q01650 507 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 TSPYL2Q9H2G4 693 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-203ENST00000430976 SYNPO2Q9UMS6 1093 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 KRT38O76015 456 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 FAM200BP0CF97 657 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 GUCY2CP25092 1073 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 FAAH2Q6GMR7 532 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 DDX27Q96GQ7 796 aaKnown RBP6.31□□□□□ -1.4
PTPN4-203ENST00000430976 AK7Q96M32 723 aa6.31□□□□□ -1.4
PTPN4-203ENST00000430976 UTP6Q9NYH9 597 aaKnown RBP6.31□□□□□ -1.4
PTPN4-203ENST00000430976 SCHIP1Q9P0W5 487 aaPredicted RBP6.31□□□□□ -1.4
PTPN4-203ENST00000430976 CBFA2T2O43439 604 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 COQ9O75208 318 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 RIPK4P57078 832 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 CCDC73Q6ZRK6 1079 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 FAM47EQ6ZV65 393 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 MYO1HQ8N1T3 1032 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 MTRQ99707 1265 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 MED4Q9NPJ6 270 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 SERPINA10Q9UK55 444 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 B3GALNT1O75752 331 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 FOSP01100 380 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-203ENST00000430976 VCAM1P19320 739 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 OLFML1Q6UWY5 402 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.3□□□□□ -1.4
PTPN4-203ENST00000430976 SEL1LQ9UBV2 794 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 RABGAP1Q9Y3P9 1069 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 FYB1O15117 783 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 PPFIA2O75334 1257 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 KIAA0754O94854 1291 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 MNAT1P51948 309 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 KANK3Q6NY19 840 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 SLC4A10Q6U841 1118 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 PDCL2Q8N4E4 241 aa6.3□□□□□ -1.4
PTPN4-203ENST00000430976 SASH1O94885 1247 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 FGFR1OPO95684 399 aaKnown RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 TPP2P29144 1249 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 AMOTQ4VCS5 1084 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 C6orf203Q9P0P8 240 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 ABCF2Q9UG63 623 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 KLHL33A6NCF5 533 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 FAM177BA6PVY3 158 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 SKILP12757 684 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 GNAT2P19087 354 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 DNAJA1P31689 397 aaKnown RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 RANBP1P43487 201 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 SPECC1Q5M775 1068 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 MCM10Q7L590 875 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 DNAAF4Q8WXU2 420 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 ATP6V1E2Q96A05 226 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 EXOC1Q9NV70 894 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 N6AMT1Q9Y5N5 214 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 GIGYF1O75420 1035 aaPredicted RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 TPM1P09493 284 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 MATR3P43243 847 aaKnown RBP eCLIP6.29□□□□□ -1.45e-7■■■■□ 25.1
PTPN4-203ENST00000430976 EVA1CP58658 441 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 WASHC5Q12768 1159 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 BIRC3Q13489 604 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 UVSSAQ2YD98 709 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 DRC7Q8IY82 874 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 WHAMMQ8TF30 809 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 TEKT1Q969V4 418 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 SLC7A5P2Q9GIP4 190 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 TAOK3Q9H2K8 898 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 AASDHPPTQ9NRN7 309 aa6.29□□□□□ -1.4
PTPN4-203ENST00000430976 SPATS2LQ9NUQ6 558 aaKnown RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 NOL7Q9UMY1 257 aaKnown RBP6.29□□□□□ -1.4
PTPN4-203ENST00000430976 TRIM21P19474 475 aaKnown RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 ERCC5P28715 1186 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 XPCQ01831 940 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 KCTD2Q14681 263 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 NYAP1Q6ZVC0 841 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 TSC1Q92574 1164 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 CFAP45Q9UL16 551 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 CFAP69A5D8W1 941 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 PABPN1LA6NDY0 278 aaKnown RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 EXOC5O00471 708 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 TTC31Q49AM3 519 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 PROSER2Q86WR7 435 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 DYDC1Q8WWB3 177 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 AGBL1Q96MI9 1066 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 SEZ6LQ9BYH1 1024 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 ETAA1Q9NY74 926 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 PAXBP1Q9Y5B6 917 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 PPM1FP49593 454 aaPredicted RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 TBX4P57082 545 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 LARP1BQ659C4 914 aaKnown RBP6.28□□□□□ -1.4
PTPN4-203ENST00000430976 HELQQ8TDG4 1101 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 IFT122Q9HBG6 1241 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 DIAPH3Q9NSV4 1193 aa6.28□□□□□ -1.4
PTPN4-203ENST00000430976 DMGDHQ9UI17 866 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms