RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 STMN2Q93045 179 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 RASAL2Q9UJF2 1139 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
RIF1-204ENST00000430328 CCDC144CPQ8IYA2 1237 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 RBM5P52756 815 aaKnown RBP eCLIP18.96■□□□□ 0.632e-8■■■□□ 16.5
RIF1-204ENST00000430328 SEPT14Q6ZU15 432 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 SH3BP5O60239 455 aa18.96■□□□□ 0.63
RIF1-204ENST00000430328 PPFIA2O75334 1257 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 PPFIBP2Q8ND30 876 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 CCDC144AA2RUR9 1427 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 CCDC77Q9BR77 488 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 SELENOOQ9BVL4 669 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 PRC1O43663 620 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 LACTBP83111 547 aaPredicted RBP18.95■□□□□ 0.62
RIF1-204ENST00000430328 DZIP1Q86YF9 867 aaKnown RBP18.95■□□□□ 0.62
RIF1-204ENST00000430328 PHAXQ9H814 394 aaKnown RBP18.95■□□□□ 0.62
RIF1-204ENST00000430328 CCDC114Q96M63 670 aa18.95■□□□□ 0.62
RIF1-204ENST00000430328 ATP11AP98196 1134 aa18.94■□□□□ 0.62
RIF1-204ENST00000430328 PRIMPOLQ96LW4 560 aa18.94■□□□□ 0.62
RIF1-204ENST00000430328 RABGAP1Q9Y3P9 1069 aa18.94■□□□□ 0.62
RIF1-204ENST00000430328 ERCC3P19447 782 aa18.94■□□□□ 0.62
RIF1-204ENST00000430328 MCM5P33992 734 aa18.94■□□□□ 0.62
RIF1-204ENST00000430328 PRR16Q569H4 304 aa18.94■□□□□ 0.62
RIF1-204ENST00000430328 JAKMIP1Q96N16 626 aaKnown RBP18.94■□□□□ 0.62
RIF1-204ENST00000430328 CCDC171Q6TFL3 1326 aa18.93■□□□□ 0.62
RIF1-204ENST00000430328 CACNA2D3Q8IZS8 1091 aa18.93■□□□□ 0.62
RIF1-204ENST00000430328 FAM114A2Q9NRY5 505 aa18.93■□□□□ 0.62
RIF1-204ENST00000430328 RRBP1Q9P2E9 1410 aaKnown RBP18.93■□□□□ 0.62
RIF1-204ENST00000430328 PDZRN3Q9UPQ7 1066 aa18.93■□□□□ 0.62
RIF1-204ENST00000430328 ZNF287Q9HBT7 754 aa18.93■□□□□ 0.62
RIF1-204ENST00000430328 CAPN2P17655 700 aa18.93■□□□□ 0.62
RIF1-204ENST00000430328 MTIF2P46199 727 aaKnown RBP18.93■□□□□ 0.62
RIF1-204ENST00000430328 ZSCAN29Q8IWY8 852 aaPredicted RBP18.93■□□□□ 0.62
RIF1-204ENST00000430328 HMOX1P09601 288 aa18.92■□□□□ 0.62
RIF1-204ENST00000430328 MCM6Q14566 821 aa18.92■□□□□ 0.62
RIF1-204ENST00000430328 WDR63Q8IWG1 891 aa18.92■□□□□ 0.62
RIF1-204ENST00000430328 TTC12Q9H892 705 aaPredicted RBP18.92■□□□□ 0.62
RIF1-204ENST00000430328 SCAND2PQ9GZW5 306 aaPredicted RBP18.92■□□□□ 0.62
RIF1-204ENST00000430328 FKBP4Q02790 459 aaKnown RBP eCLIP18.92■□□□□ 0.62
RIF1-204ENST00000430328 SF3B2Q13435 895 aaKnown RBP18.92■□□□□ 0.62
RIF1-204ENST00000430328 TMEM266Q2M3C6 531 aa18.92■□□□□ 0.62
RIF1-204ENST00000430328 ATP2A1O14983 1001 aa18.92■□□□□ 0.62
RIF1-204ENST00000430328 CCDC172P0C7W6 258 aa18.92■□□□□ 0.62
RIF1-204ENST00000430328 MGEA5O60502 916 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 LMNTD2Q8IXW0 634 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 CPLX3Q8WVH0 158 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 NUF2Q9BZD4 464 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 EFCAB2Q5VUJ9 269 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 CPLX4Q7Z7G2 160 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 CCDC129Q6ZRS4 1044 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 CCDC12Q8WUD4 166 aaPredicted RBP18.91■□□□□ 0.62
RIF1-204ENST00000430328 TRIM7Q9C029 511 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 FAM177BA6PVY3 158 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 FLIIQ13045 1269 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 USP47Q96K76 1375 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 SNX16P57768 344 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 SETDB1Q15047 1291 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 CTAGE6Q86UF2 777 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 LIG1P18858 919 aa18.91■□□□□ 0.62
RIF1-204ENST00000430328 CIB2O75838 187 aa18.9■□□□□ 0.62
RIF1-204ENST00000430328 USH1CQ9Y6N9 552 aa18.9■□□□□ 0.62
RIF1-204ENST00000430328 CCDC14Q49A88 953 aa18.9■□□□□ 0.62
RIF1-204ENST00000430328 ZMAT2Q96NC0 199 aaKnown RBP18.9■□□□□ 0.62
RIF1-204ENST00000430328 PCK1P35558 622 aa18.9■□□□□ 0.62
RIF1-204ENST00000430328 TMC6Q7Z403 805 aa18.9■□□□□ 0.62
RIF1-204ENST00000430328 ALDH3A1P30838 453 aa18.9■□□□□ 0.62
RIF1-204ENST00000430328 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.9■□□□□ 0.62
RIF1-204ENST00000430328 CNNM3Q8NE01 707 aa18.89■□□□□ 0.62
RIF1-204ENST00000430328 CFAP157Q5JU67 520 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 CASTP20810 708 aaKnown RBP18.89■□□□□ 0.61
RIF1-204ENST00000430328 KIAA1524Q8TCG1 905 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 SEPT8Q92599 483 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 MPHOSPH8Q99549 860 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 TTC21AQ8NDW8 1320 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 SH2D4BQ5SQS7 431 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
RIF1-204ENST00000430328 CCDC196A0A1B0GTZ2 297 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 GNG11P61952 73 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 C10orf67Q8IYJ2 551 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 TXNDC16Q9P2K2 825 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 PUF60Q9UHX1 559 aaKnown RBP18.88■□□□□ 0.61
RIF1-204ENST00000430328 ZSWIM4Q9H7M6 989 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 MVPQ14764 893 aaKnown RBP18.88■□□□□ 0.61
RIF1-204ENST00000430328 CCDC170Q8IYT3 715 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 TBC1D5Q92609 795 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 PRPF31Q8WWY3 499 aaKnown RBP18.88■□□□□ 0.61
RIF1-204ENST00000430328 RBM28Q9NW13 759 aaKnown RBP18.88■□□□□ 0.61
RIF1-204ENST00000430328 TMCO4Q5TGY1 634 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 IFT74Q96LB3 600 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 SAMD15Q9P1V8 674 aa18.88■□□□□ 0.61
RIF1-204ENST00000430328 MINK1Q8N4C8 1332 aaPredicted RBP18.87■□□□□ 0.61
RIF1-204ENST00000430328 GOLIM4O00461 696 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 AMPD3Q01432 767 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 GBP1P32455 592 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 STXBP4Q6ZWJ1 553 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 MYO1BO43795 1136 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 PRPHP41219 470 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 TUBB4BP68371 445 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 SELENOSQ9BQE4 189 aa18.87■□□□□ 0.61
RIF1-204ENST00000430328 TCERG1LQ5VWI1 586 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms