RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 NECTIN2Q92692 538 aa22.68■■□□□ 1.22
PDE6B-202ENST00000429163 GZF1Q9H116 711 aaPredicted RBP22.68■■□□□ 1.22
PDE6B-202ENST00000429163 LGR6Q9HBX8 967 aa22.68■■□□□ 1.22
PDE6B-202ENST00000429163 RGPD2P0DJD1 1756 aa22.67■■□□□ 1.22
PDE6B-202ENST00000429163 PPP1R42Q7Z4L9 355 aa22.67■■□□□ 1.22
PDE6B-202ENST00000429163 INTS4Q96HW7 963 aaKnown RBP22.67■■□□□ 1.22
PDE6B-202ENST00000429163 GRPEL1Q9HAV7 217 aa22.67■■□□□ 1.22
PDE6B-202ENST00000429163 CHPF2Q9P2E5 772 aa22.66■■□□□ 1.22
PDE6B-202ENST00000429163 SIPA1L3O60292 1781 aaPredicted RBP22.66■■□□□ 1.22
PDE6B-202ENST00000429163 RHPN1Q8TCX5 695 aa22.66■■□□□ 1.22
PDE6B-202ENST00000429163 CUL4AQ13619 759 aa22.65■■□□□ 1.22
PDE6B-202ENST00000429163 TTC41PQ6P2S7 1318 aa22.65■■□□□ 1.22
PDE6B-202ENST00000429163 FOXD4L1Q9NU39 408 aa22.64■■□□□ 1.22
PDE6B-202ENST00000429163 ADCY9O60503 1353 aa22.64■■□□□ 1.21
PDE6B-202ENST00000429163 PI4KAP2A4QPH2 592 aa22.64■■□□□ 1.21
PDE6B-202ENST00000429163 TRIM6-TRIM34B2RNG4 842 aa22.64■■□□□ 1.21
PDE6B-202ENST00000429163 SURF6O75683 361 aaKnown RBP22.64■■□□□ 1.21
PDE6B-202ENST00000429163 PI4KAP1Q8N8J0 262 aa22.64■■□□□ 1.21
PDE6B-202ENST00000429163 CRYBG1Q9Y4K1 1723 aa22.64■■□□□ 1.21
PDE6B-202ENST00000429163 EIF2S2P20042 333 aaKnown RBP22.63■■□□□ 1.21
PDE6B-202ENST00000429163 ANKRD24Q8TF21 1146 aa22.63■■□□□ 1.21
PDE6B-202ENST00000429163 HYPKQ9NX55 129 aa22.63■■□□□ 1.21
PDE6B-202ENST00000429163 SRGAP3O43295 1099 aa22.63■■□□□ 1.21
PDE6B-202ENST00000429163 ERC1Q8IUD2 1116 aa22.63■■□□□ 1.21
PDE6B-202ENST00000429163 GIGYF1O75420 1035 aaPredicted RBP22.62■■□□□ 1.21
PDE6B-202ENST00000429163 RILPL2Q969X0 211 aa22.62■■□□□ 1.21
PDE6B-202ENST00000429163 NEK4P51957 841 aa22.61■■□□□ 1.21
PDE6B-202ENST00000429163 KSR2Q6VAB6 950 aa22.61■■□□□ 1.21
PDE6B-202ENST00000429163 PI4K2BQ8TCG2 481 aa22.61■■□□□ 1.21
PDE6B-202ENST00000429163 CNTROBQ8N137 903 aa22.61■■□□□ 1.21
PDE6B-202ENST00000429163 AK9Q5TCS8 1911 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 C1orf167Q5SNV9 1468 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 LRRC59Q96AG4 307 aaKnown RBP22.6■■□□□ 1.21
PDE6B-202ENST00000429163 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 ALS2Q96Q42 1657 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 UTYO14607 1347 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 PXDNQ92626 1479 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 HSPA4P34932 840 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 TMX3Q96JJ7 454 aa22.6■■□□□ 1.21
PDE6B-202ENST00000429163 RTN4Q9NQC3 1192 aaKnown RBP22.6■■□□□ 1.21
PDE6B-202ENST00000429163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.6■■□□□ 1.21
PDE6B-202ENST00000429163 DDX49Q9Y6V7 483 aaKnown RBP22.6■■□□□ 1.21
PDE6B-202ENST00000429163 NBPF7P0C2Y1 421 aaPredicted RBP22.59■■□□□ 1.21
PDE6B-202ENST00000429163 ORAI2Q96SN7 254 aa22.59■■□□□ 1.21
PDE6B-202ENST00000429163 DCCP43146 1447 aa22.58■■□□□ 1.21
PDE6B-202ENST00000429163 GLRX3O76003 335 aaKnown RBP22.58■■□□□ 1.21
PDE6B-202ENST00000429163 DDX58O95786 925 aaKnown RBP22.58■■□□□ 1.21
PDE6B-202ENST00000429163 ZNF445P59923 1031 aa22.58■■□□□ 1.21
PDE6B-202ENST00000429163 MPRIPQ6WCQ1 1025 aa22.58■■□□□ 1.21
PDE6B-202ENST00000429163 KRT28Q7Z3Y7 464 aa22.58■■□□□ 1.21
PDE6B-202ENST00000429163 C19orf44Q9H6X5 657 aa22.58■■□□□ 1.2
PDE6B-202ENST00000429163 SGSM2O43147 1006 aa22.57■■□□□ 1.2
PDE6B-202ENST00000429163 KCNQ3O43525 872 aa22.57■■□□□ 1.2
PDE6B-202ENST00000429163 TSHZ3Q63HK5 1081 aa22.57■■□□□ 1.2
PDE6B-202ENST00000429163 LINS1Q8NG48 757 aa22.57■■□□□ 1.2
PDE6B-202ENST00000429163 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
PDE6B-202ENST00000429163 LMBRD1Q9NUN5 540 aa22.57■■□□□ 1.2
PDE6B-202ENST00000429163 ERBB3P21860 1342 aa22.56■■□□□ 1.2
PDE6B-202ENST00000429163 RAD50Q92878 1312 aa22.56■■□□□ 1.2
PDE6B-202ENST00000429163 GPATCH3Q96I76 525 aa22.56■■□□□ 1.2
PDE6B-202ENST00000429163 IL1RAPL2Q9NP60 686 aa22.56■■□□□ 1.2
PDE6B-202ENST00000429163 CLASRPQ8N2M8 674 aaKnown RBP22.55■■□□□ 1.2
PDE6B-202ENST00000429163 PLEKHG5O94827 1062 aa22.55■■□□□ 1.2
PDE6B-202ENST00000429163 UNC5CLQ8IV45 518 aa22.55■■□□□ 1.2
PDE6B-202ENST00000429163 ZGPATQ8N5A5 531 aaKnown RBP22.55■■□□□ 1.2
PDE6B-202ENST00000429163 RUFY2Q8WXA3 655 aa22.55■■□□□ 1.2
PDE6B-202ENST00000429163 MCTP1Q6DN14 999 aa22.54■■□□□ 1.2
PDE6B-202ENST00000429163 C9orf78Q9NZ63 289 aaPredicted RBP22.54■■□□□ 1.2
PDE6B-202ENST00000429163 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
PDE6B-202ENST00000429163 BRD1O95696 1058 aa22.53■■□□□ 1.2
PDE6B-202ENST00000429163 NUTM1Q86Y26 1132 aa22.53■■□□□ 1.2
PDE6B-202ENST00000429163 PANK2Q9BZ23 570 aa22.53■■□□□ 1.2
PDE6B-202ENST00000429163 ZDHHC9Q9Y397 364 aa22.53■■□□□ 1.2
PDE6B-202ENST00000429163 SCN11AQ9UI33 1791 aa22.53■■□□□ 1.2
PDE6B-202ENST00000429163 PROSER2Q86WR7 435 aaPredicted RBP22.52■■□□□ 1.2
PDE6B-202ENST00000429163 PALD1Q9ULE6 856 aa22.52■■□□□ 1.2
PDE6B-202ENST00000429163 RBM33Q96EV2 1170 aaKnown RBP22.52■■□□□ 1.2
PDE6B-202ENST00000429163 ZBTB7CA1YPR0 619 aa22.51■■□□□ 1.19
PDE6B-202ENST00000429163 MBD3O95983 291 aa22.51■■□□□ 1.19
PDE6B-202ENST00000429163 GAS2L3Q86XJ1 694 aa22.51■■□□□ 1.19
PDE6B-202ENST00000429163 KIAA1211Q6ZU35 1233 aa22.51■■□□□ 1.19
PDE6B-202ENST00000429163 ECHDC1Q9NTX5 307 aa22.51■■□□□ 1.19
PDE6B-202ENST00000429163 HIP1O00291 1037 aa22.5■■□□□ 1.19
PDE6B-202ENST00000429163 RAPGEF4Q8WZA2 1011 aa22.5■■□□□ 1.19
PDE6B-202ENST00000429163 SPG7Q9UQ90 795 aa22.5■■□□□ 1.19
PDE6B-202ENST00000429163 AXIN2Q9Y2T1 843 aa22.5■■□□□ 1.19
PDE6B-202ENST00000429163 MRC1P22897 1456 aa22.5■■□□□ 1.19
PDE6B-202ENST00000429163 GRM8O00222 908 aa22.49■■□□□ 1.19
PDE6B-202ENST00000429163 LSG1Q9H089 658 aaKnown RBP22.49■■□□□ 1.19
PDE6B-202ENST00000429163 OS9Q13438 667 aaPredicted RBP22.49■■□□□ 1.19
PDE6B-202ENST00000429163 PKP1Q13835 747 aa22.49■■□□□ 1.19
PDE6B-202ENST00000429163 LARP1Q6PKG0 1096 aaKnown RBP22.49■■□□□ 1.19
PDE6B-202ENST00000429163 COL15A1P39059 1388 aa22.48■■□□□ 1.19
PDE6B-202ENST00000429163 CCDC173Q0VFZ6 552 aa22.48■■□□□ 1.19
PDE6B-202ENST00000429163 KLHL34Q8N239 644 aa22.48■■□□□ 1.19
PDE6B-202ENST00000429163 ANP32BQ92688 251 aaKnown RBP22.48■■□□□ 1.19
PDE6B-202ENST00000429163 SLC52A2Q9HAB3 445 aa22.48■■□□□ 1.19
PDE6B-202ENST00000429163 NPHP3Q7Z494 1330 aa22.48■■□□□ 1.19
PDE6B-202ENST00000429163 CLCN1P35523 988 aa22.48■■□□□ 1.19
PDE6B-202ENST00000429163 ZNF790Q6PG37 636 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms