RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PKD1L3Q7Z443 1732 aa9.01□□□□□ -0.97
CDC7-203ENST00000428239 FAM177BA6PVY3 158 aa9.01□□□□□ -0.97
CDC7-203ENST00000428239 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
CDC7-203ENST00000428239 TBC1D2BQ9UPU7 963 aa9.01□□□□□ -0.97
CDC7-203ENST00000428239 ATF5Q9Y2D1 282 aaPredicted RBP9.01□□□□□ -0.97
CDC7-203ENST00000428239 GTF2E1P29083 439 aaPredicted RBP9.01□□□□□ -0.97
CDC7-203ENST00000428239 ZNF428Q96B54 188 aa9.01□□□□□ -0.97
CDC7-203ENST00000428239 GIGYF1O75420 1035 aaPredicted RBP9□□□□□ -0.97
CDC7-203ENST00000428239 CCDC30Q5VVM6 783 aa9□□□□□ -0.97
CDC7-203ENST00000428239 VSIG10Q8N0Z9 540 aa9□□□□□ -0.97
CDC7-203ENST00000428239 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
CDC7-203ENST00000428239 ZNF827Q17R98 1081 aa9□□□□□ -0.97
CDC7-203ENST00000428239 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
CDC7-203ENST00000428239 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
CDC7-203ENST00000428239 ZBTB3Q9H5J0 574 aa8.99□□□□□ -0.97
CDC7-203ENST00000428239 SPINK5Q9NQ38 1064 aaPredicted RBP8.99□□□□□ -0.97
CDC7-203ENST00000428239 SMC4Q9NTJ3 1288 aa8.99□□□□□ -0.97
CDC7-203ENST00000428239 CHPF2Q9P2E5 772 aa8.99□□□□□ -0.97
CDC7-203ENST00000428239 IL16Q14005 1332 aa8.99□□□□□ -0.97
CDC7-203ENST00000428239 CYP19A1P11511 503 aaPredicted RBP8.99□□□□□ -0.97
CDC7-203ENST00000428239 TSPYL6Q8N831 410 aa8.99□□□□□ -0.97
CDC7-203ENST00000428239 FLAD1Q8NFF5 587 aa8.99□□□□□ -0.97
CDC7-203ENST00000428239 FRAT1Q92837 279 aaPredicted RBP8.99□□□□□ -0.97
CDC7-203ENST00000428239 PRKCSHP14314 528 aaPredicted RBP8.98□□□□□ -0.97
CDC7-203ENST00000428239 POLD1P28340 1107 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 DZIP3Q86Y13 1208 aaKnown RBP8.98□□□□□ -0.97
CDC7-203ENST00000428239 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
CDC7-203ENST00000428239 ZBED9Q6R2W3 1325 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 SLC4A2P04920 1241 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 FKBP5Q13451 457 aaPredicted RBP8.98□□□□□ -0.97
CDC7-203ENST00000428239 RIC3Q7Z5B4 369 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 DBF4Q9UBU7 674 aaPredicted RBP8.98□□□□□ -0.97
CDC7-203ENST00000428239 BTAF1O14981 1849 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 A0A087WZG4 1122 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 RPS6KA4O75676 772 aa8.98□□□□□ -0.97
CDC7-203ENST00000428239 DDX58O95786 925 aaKnown RBP8.97□□□□□ -0.97
CDC7-203ENST00000428239 SLC4A10Q6U841 1118 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 SRP68Q9UHB9 627 aaKnown RBP8.97□□□□□ -0.97
CDC7-203ENST00000428239 ZNF652Q9Y2D9 606 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 NHSQ6T4R5 1651 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 SLFN5Q08AF3 891 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 ARHGEF1Q92888 912 aaKnown RBP8.97□□□□□ -0.97
CDC7-203ENST00000428239 USPL1Q5W0Q7 1092 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 COPS6Q7L5N1 327 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 XAGE3Q8WTP9 111 aa8.97□□□□□ -0.97
CDC7-203ENST00000428239 SHANK3Q9BYB0 1731 aa8.96□□□□□ -0.97
CDC7-203ENST00000428239 GPTP24298 496 aa8.96□□□□□ -0.97
CDC7-203ENST00000428239 SSFA2P28290 1259 aa8.96□□□□□ -0.97
CDC7-203ENST00000428239 COL23A1Q86Y22 540 aaPredicted RBP8.96□□□□□ -0.97
CDC7-203ENST00000428239 PDGFDQ9GZP0 370 aaPredicted RBP8.96□□□□□ -0.97
CDC7-203ENST00000428239 ZNF853P0CG23 659 aa8.96□□□□□ -0.98
CDC7-203ENST00000428239 SPON1Q9HCB6 807 aa8.96□□□□□ -0.98
CDC7-203ENST00000428239 TOGARAM1Q9Y4F4 1720 aa8.96□□□□□ -0.98
CDC7-203ENST00000428239 CNTNAP4Q9C0A0 1308 aa8.96□□□□□ -0.98
CDC7-203ENST00000428239 IL6STP40189 918 aaPredicted RBP8.95□□□□□ -0.98
CDC7-203ENST00000428239 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
CDC7-203ENST00000428239 HYPKQ9NX55 129 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 WWC3Q9ULE0 1092 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 NEXNQ0ZGT2 675 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 PROSER3Q2NL68 480 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 RTL5Q5HYW3 569 aaPredicted RBP8.95□□□□□ -0.98
CDC7-203ENST00000428239 INTS5Q6P9B9 1019 aaKnown RBP8.95□□□□□ -0.98
CDC7-203ENST00000428239 DDX21Q9NR30 783 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDC7-203ENST00000428239 COL15A1P39059 1388 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 SCN11AQ9UI33 1791 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 ITGB4P16144 1822 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 DLG5Q8TDM6 1919 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 PARP3Q9Y6F1 533 aa8.95□□□□□ -0.98
CDC7-203ENST00000428239 HOXB7P09629 217 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 ADRA2BP18089 450 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 NCBP3Q53F19 620 aaKnown RBP8.94□□□□□ -0.98
CDC7-203ENST00000428239 TTLL7Q6ZT98 887 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 AKT1S1Q96B36 256 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 SETDB2Q96T68 719 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 PNPLA7Q6ZV29 1317 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 NBPF26B4DH59 902 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 NBPF10Q6P3W6 841 aaKnown RBP8.94□□□□□ -0.98
CDC7-203ENST00000428239 NBPF15Q8N660 670 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 PHAXQ9H814 394 aaKnown RBP8.94□□□□□ -0.98
CDC7-203ENST00000428239 NIP7Q9Y221 180 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC7-203ENST00000428239 MRC1P22897 1456 aa8.94□□□□□ -0.98
CDC7-203ENST00000428239 MMP10P09238 476 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 NLGN1Q8N2Q7 840 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 SBF2Q86WG5 1849 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 VAMP4O75379 141 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 ANKRD13DQ6ZTN6 518 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
CDC7-203ENST00000428239 CCDC24Q8N4L8 307 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 MTFR1LQ9H019 292 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 SOS1Q07889 1333 aaPredicted RBP8.93□□□□□ -0.98
CDC7-203ENST00000428239 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 NBPF5PQ86XG9 351 aaPredicted RBP8.93□□□□□ -0.98
CDC7-203ENST00000428239 CLUAP1Q96AJ1 413 aa8.93□□□□□ -0.98
CDC7-203ENST00000428239 EIF5P55010 431 aaKnown RBP8.92□□□□□ -0.98
CDC7-203ENST00000428239 FKBP8Q14318 412 aa8.92□□□□□ -0.98
CDC7-203ENST00000428239 AMIGO3Q86WK7 504 aa8.92□□□□□ -0.98
CDC7-203ENST00000428239 FLIIQ13045 1269 aa8.92□□□□□ -0.98
CDC7-203ENST00000428239 SSH1Q8WYL5 1049 aa8.92□□□□□ -0.98
CDC7-203ENST00000428239 MYD88Q99836 296 aa8.92□□□□□ -0.98
CDC7-203ENST00000428239 NARFQ9UHQ1 456 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms