RNA–Protein interactions for RNA: ENST00000428174.1

CCHCR1-205, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-205ENST00000428174 CCDC87Q9NVE4 849 aa16.64■□□□□ 0.25
CCHCR1-205ENST00000428174 TJP1Q07157 1748 aa16.64■□□□□ 0.25
CCHCR1-205ENST00000428174 NUP188Q5SRE5 1749 aa16.64■□□□□ 0.25
CCHCR1-205ENST00000428174 HOXB7P09629 217 aa16.63■□□□□ 0.25
CCHCR1-205ENST00000428174 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-205ENST00000428174 SLC15A2Q16348 729 aa16.63■□□□□ 0.25
CCHCR1-205ENST00000428174 ZNF827Q17R98 1081 aa16.63■□□□□ 0.25
CCHCR1-205ENST00000428174 INTS5Q6P9B9 1019 aaKnown RBP16.63■□□□□ 0.25
CCHCR1-205ENST00000428174 C5P01031 1676 aa16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 GNPATO15228 680 aa16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 A1BGP04217 495 aa16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 TRMT2AQ8IZ69 625 aaKnown RBP16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 TFCP2L1Q9NZI6 479 aa16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 SOS1Q07889 1333 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 CICQ96RK0 1608 aaPredicted RBP16.62■□□□□ 0.25
CCHCR1-205ENST00000428174 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 RPS6KA4O75676 772 aa16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 TWISTNBQ3B726 338 aaPredicted RBP16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 TSPYL6Q8N831 410 aa16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 RTCBQ9Y3I0 505 aaKnown RBP16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
CCHCR1-205ENST00000428174 CANXP27824 592 aaKnown RBP16.6■□□□□ 0.25
CCHCR1-205ENST00000428174 HDGFL1Q5TGJ6 251 aa16.6■□□□□ 0.25
CCHCR1-205ENST00000428174 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
CCHCR1-205ENST00000428174 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
CCHCR1-205ENST00000428174 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
CCHCR1-205ENST00000428174 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
CCHCR1-205ENST00000428174 PHF14O94880 888 aa16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 SSFA2P28290 1259 aa16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 IL6STP40189 918 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 ERBB4Q15303 1308 aa16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 MYH14Q7Z406 1995 aaKnown RBP16.58■□□□□ 0.24
CCHCR1-205ENST00000428174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 VAMP4O75379 141 aa16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 CCDC30Q5VVM6 783 aa16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 SMIM5Q71RC9 77 aa16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 NPM2Q86SE8 214 aaKnown RBP16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 AMIGO3Q86WK7 504 aa16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
CCHCR1-205ENST00000428174 LAMB4A4D0S4 1761 aa16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 PNPLA7Q6ZV29 1317 aa16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 ADRA2BP18089 450 aa16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 EIF5P55010 431 aaKnown RBP16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 TRAPPC3LQ5T215 181 aa16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 DDX21Q9NR30 783 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCHCR1-205ENST00000428174 MSH5O43196 834 aa16.55■□□□□ 0.24
CCHCR1-205ENST00000428174 MYL6BP14649 208 aa16.55■□□□□ 0.24
CCHCR1-205ENST00000428174 PDIA6Q15084 440 aa16.55■□□□□ 0.24
CCHCR1-205ENST00000428174 COL23A1Q86Y22 540 aaPredicted RBP16.55■□□□□ 0.24
CCHCR1-205ENST00000428174 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
CCHCR1-205ENST00000428174 DBF4Q9UBU7 674 aaPredicted RBP16.55■□□□□ 0.24
CCHCR1-205ENST00000428174 A0A087WZG4 1122 aa16.54■□□□□ 0.24
CCHCR1-205ENST00000428174 TCERG1O14776 1098 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-205ENST00000428174 ANXA1P04083 346 aa16.54■□□□□ 0.24
CCHCR1-205ENST00000428174 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
CCHCR1-205ENST00000428174 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
CCHCR1-205ENST00000428174 COL15A1P39059 1388 aa16.53■□□□□ 0.24
CCHCR1-205ENST00000428174 CT47B1P0C2W7 299 aaPredicted RBP16.53■□□□□ 0.24
CCHCR1-205ENST00000428174 RFC4P35249 363 aa16.53■□□□□ 0.24
CCHCR1-205ENST00000428174 PROSER3Q2NL68 480 aa16.53■□□□□ 0.24
CCHCR1-205ENST00000428174 ARXQ96QS3 562 aa16.53■□□□□ 0.24
CCHCR1-205ENST00000428174 UBR3Q6ZT12 1888 aa16.52■□□□□ 0.24
CCHCR1-205ENST00000428174 ZNF428Q96B54 188 aa16.52■□□□□ 0.24
CCHCR1-205ENST00000428174 HYPKQ9NX55 129 aa16.52■□□□□ 0.24
CCHCR1-205ENST00000428174 LRP10Q7Z4F1 713 aa16.51■□□□□ 0.23
CCHCR1-205ENST00000428174 DZIP3Q86Y13 1208 aaKnown RBP16.51■□□□□ 0.23
CCHCR1-205ENST00000428174 TBC1D2BQ9UPU7 963 aa16.51■□□□□ 0.23
CCHCR1-205ENST00000428174 TUBGCP6Q96RT7 1819 aa16.5■□□□□ 0.23
CCHCR1-205ENST00000428174 ZPR1O75312 459 aa16.5■□□□□ 0.23
CCHCR1-205ENST00000428174 SLC4A2P04920 1241 aa16.5■□□□□ 0.23
CCHCR1-205ENST00000428174 SLC16A10Q8TF71 515 aa16.5■□□□□ 0.23
CCHCR1-205ENST00000428174 PDGFDQ9GZP0 370 aaPredicted RBP16.5■□□□□ 0.23
CCHCR1-205ENST00000428174 NARFQ9UHQ1 456 aa16.5■□□□□ 0.23
CCHCR1-205ENST00000428174 AIMP1Q12904 312 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 QSER1Q2KHR3 1735 aa16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 TTLL7Q6ZT98 887 aa16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 COPS6Q7L5N1 327 aa16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 XAGE3Q8WTP9 111 aa16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 SRP68Q9UHB9 627 aaKnown RBP16.49■□□□□ 0.23
CCHCR1-205ENST00000428174 USP42Q9H9J4 1324 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-205ENST00000428174 ALDH1L2Q3SY69 923 aa16.48■□□□□ 0.23
CCHCR1-205ENST00000428174 PHAXQ9H814 394 aaKnown RBP16.48■□□□□ 0.23
CCHCR1-205ENST00000428174 CAMTA2O94983 1202 aa16.47■□□□□ 0.23
CCHCR1-205ENST00000428174 USPL1Q5W0Q7 1092 aa16.47■□□□□ 0.23
CCHCR1-205ENST00000428174 SSH1Q8WYL5 1049 aa16.47■□□□□ 0.23
CCHCR1-205ENST00000428174 MAP3K15Q6ZN16 1313 aa16.46■□□□□ 0.23
CCHCR1-205ENST00000428174 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
CCHCR1-205ENST00000428174 GYS1P13807 737 aa16.46■□□□□ 0.23
CCHCR1-205ENST00000428174 RARSP54136 660 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-205ENST00000428174 G2E3Q7L622 706 aa16.46■□□□□ 0.23
CCHCR1-205ENST00000428174 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
CCHCR1-205ENST00000428174 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms