RNA–Protein interactions for RNA: ENST00000428083.1

RHOA-IT1-201, RHOA intronic transcript 1, humanhuman

TSL 3 BASIC

Gene RHOA-IT1, Length 517 nt, Biotype sense intronic, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOA-IT1-201ENST00000428083 USP42Q9H9J4 1324 aaKnown RBP13.99□□□□□ -0.17
RHOA-IT1-201ENST00000428083 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
RHOA-IT1-201ENST00000428083 NARFQ9UHQ1 456 aa13.99□□□□□ -0.17
RHOA-IT1-201ENST00000428083 ADAMTS8Q9UP79 889 aa13.99□□□□□ -0.17
RHOA-IT1-201ENST00000428083 MYH14Q7Z406 1995 aaKnown RBP13.99□□□□□ -0.17
RHOA-IT1-201ENST00000428083 RIPK4P57078 832 aa13.98□□□□□ -0.17
RHOA-IT1-201ENST00000428083 ZPR1O75312 459 aa13.97□□□□□ -0.17
RHOA-IT1-201ENST00000428083 ANP32CO43423 234 aa13.96□□□□□ -0.17
RHOA-IT1-201ENST00000428083 MMP10P09238 476 aa13.96□□□□□ -0.17
RHOA-IT1-201ENST00000428083 TM4SF1P30408 202 aa13.96□□□□□ -0.17
RHOA-IT1-201ENST00000428083 TGFB2P61812 414 aa13.96□□□□□ -0.17
RHOA-IT1-201ENST00000428083 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
RHOA-IT1-201ENST00000428083 ZBTB1Q9Y2K1 713 aa13.96□□□□□ -0.17
RHOA-IT1-201ENST00000428083 MSL1Q68DK7 614 aa13.95□□□□□ -0.18
RHOA-IT1-201ENST00000428083 COL15A1P39059 1388 aa13.95□□□□□ -0.18
RHOA-IT1-201ENST00000428083 KCNQ3O43525 872 aa13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 GRIN3BO60391 1043 aa13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 EIF4A1P60842 406 aaKnown RBP13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 CLEC4GQ6UXB4 293 aa13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 NPM2Q86SE8 214 aaKnown RBP13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 PARP3Q9Y6F1 533 aa13.94□□□□□ -0.18
RHOA-IT1-201ENST00000428083 ERBB4Q15303 1308 aa13.93□□□□□ -0.18
RHOA-IT1-201ENST00000428083 CALD1Q05682 793 aaKnown RBP13.93□□□□□ -0.18
RHOA-IT1-201ENST00000428083 USP16Q9Y5T5 823 aa13.93□□□□□ -0.18
RHOA-IT1-201ENST00000428083 CHL1O00533 1208 aa13.92□□□□□ -0.18
RHOA-IT1-201ENST00000428083 CANXP27824 592 aaKnown RBP13.92□□□□□ -0.18
RHOA-IT1-201ENST00000428083 FKBP8Q14318 412 aa13.92□□□□□ -0.18
RHOA-IT1-201ENST00000428083 USPL1Q5W0Q7 1092 aa13.92□□□□□ -0.18
RHOA-IT1-201ENST00000428083 TRIM35Q9UPQ4 493 aa13.92□□□□□ -0.18
RHOA-IT1-201ENST00000428083 DLG5Q8TDM6 1919 aa13.92□□□□□ -0.18
RHOA-IT1-201ENST00000428083 C4AP0C0L4 1744 aa13.91□□□□□ -0.18
RHOA-IT1-201ENST00000428083 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
RHOA-IT1-201ENST00000428083 PDZRN3Q9UPQ7 1066 aa13.91□□□□□ -0.18
RHOA-IT1-201ENST00000428083 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 POLRMTO00411 1230 aaKnown RBP13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 A1BGP04217 495 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 HOXB7P09629 217 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 NLGN2Q8NFZ4 835 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 SRP68Q9UHB9 627 aaKnown RBP13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 TSPYL4Q9UJ04 414 aa13.9□□□□□ -0.18
RHOA-IT1-201ENST00000428083 KDM3BQ7LBC6 1761 aa13.89□□□□□ -0.19
RHOA-IT1-201ENST00000428083 GPR162Q16538 588 aa13.89□□□□□ -0.19
RHOA-IT1-201ENST00000428083 CHMP4AQ9BY43 222 aa13.89□□□□□ -0.19
RHOA-IT1-201ENST00000428083 MIS18AQ9NYP9 233 aa13.89□□□□□ -0.19
RHOA-IT1-201ENST00000428083 KIF13BQ9NQT8 1826 aa13.89□□□□□ -0.19
RHOA-IT1-201ENST00000428083 ERVV-1B6SEH8 477 aa13.88□□□□□ -0.19
RHOA-IT1-201ENST00000428083 DDR1Q08345 913 aa13.88□□□□□ -0.19
RHOA-IT1-201ENST00000428083 NFIXQ14938 502 aa13.88□□□□□ -0.19
RHOA-IT1-201ENST00000428083 CCDC146Q8IYE0 955 aa13.88□□□□□ -0.19
RHOA-IT1-201ENST00000428083 THUMPD2Q9BTF0 503 aaKnown RBP13.88□□□□□ -0.19
RHOA-IT1-201ENST00000428083 ZNF652Q9Y2D9 606 aa13.88□□□□□ -0.19
RHOA-IT1-201ENST00000428083 NBPF26B4DH59 902 aa13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 APAF1O14727 1248 aa13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 CAMTA2O94983 1202 aa13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 ZNF853P0CG23 659 aa13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 NBPF10Q6P3W6 841 aaKnown RBP13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 DZIP3Q86Y13 1208 aaKnown RBP13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 NBPF15Q8N660 670 aa13.87□□□□□ -0.19
RHOA-IT1-201ENST00000428083 PRAMEF22A3QJZ6 481 aa13.86□□□□□ -0.19
RHOA-IT1-201ENST00000428083 KLHL34Q8N239 644 aa13.86□□□□□ -0.19
RHOA-IT1-201ENST00000428083 MRS2Q9HD23 443 aa13.86□□□□□ -0.19
RHOA-IT1-201ENST00000428083 IFT57Q9NWB7 429 aa13.86□□□□□ -0.19
RHOA-IT1-201ENST00000428083 TBC1D2BQ9UPU7 963 aa13.86□□□□□ -0.19
RHOA-IT1-201ENST00000428083 CARMIL3Q8ND23 1372 aa13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 SERPINB2P05120 415 aa13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 GNAI1P63096 354 aa13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 NEUROD2Q15784 382 aa13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 SETDB2Q96T68 719 aa13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 RRP7AQ9Y3A4 280 aaKnown RBP13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 PXDNLA1KZ92 1463 aa13.85□□□□□ -0.19
RHOA-IT1-201ENST00000428083 NRXN2Q9P2S2 1712 aa13.84□□□□□ -0.19
RHOA-IT1-201ENST00000428083 KCNA3P22001 575 aa13.84□□□□□ -0.19
RHOA-IT1-201ENST00000428083 CCDC184Q52MB2 194 aa13.84□□□□□ -0.19
RHOA-IT1-201ENST00000428083 BRIP1Q9BX63 1249 aa13.84□□□□□ -0.19
RHOA-IT1-201ENST00000428083 LAMB4A4D0S4 1761 aa13.83□□□□□ -0.19
RHOA-IT1-201ENST00000428083 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.2
RHOA-IT1-201ENST00000428083 YY1P25490 414 aa13.83□□□□□ -0.2
RHOA-IT1-201ENST00000428083 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
RHOA-IT1-201ENST00000428083 LRP10Q7Z4F1 713 aa13.83□□□□□ -0.2
RHOA-IT1-201ENST00000428083 PIM2Q9P1W9 311 aa13.83□□□□□ -0.2
RHOA-IT1-201ENST00000428083 IL16Q14005 1332 aa13.83□□□□□ -0.2
RHOA-IT1-201ENST00000428083 SCN7AQ01118 1682 aa13.82□□□□□ -0.2
RHOA-IT1-201ENST00000428083 PDE6BP35913 854 aa13.82□□□□□ -0.2
RHOA-IT1-201ENST00000428083 PDIA6Q15084 440 aa13.82□□□□□ -0.2
RHOA-IT1-201ENST00000428083 UTRNP46939 3433 aa13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 KLRG2A4D1S0 409 aaPredicted RBP13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 DPEP1P16444 411 aa13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 TPTE2Q6XPS3 522 aa13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 DDX21Q9NR30 783 aaKnown RBP eCLIP13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 MAP3K15Q6ZN16 1313 aa13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 ATP10DQ9P241 1426 aa13.81□□□□□ -0.2
RHOA-IT1-201ENST00000428083 GOLGB1Q14789 3259 aaKnown RBP13.8□□□□□ -0.2
RHOA-IT1-201ENST00000428083 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
RHOA-IT1-201ENST00000428083 KIF6Q6ZMV9 814 aa13.8□□□□□ -0.2
RHOA-IT1-201ENST00000428083 WDR63Q8IWG1 891 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms