RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 BARGINQ6ZT62 677 aa10.66□□□□□ -0.7
SH3D19-204ENST00000427414 ALDH1L1O75891 902 aa10.66□□□□□ -0.7
SH3D19-204ENST00000427414 VSIG10Q8N0Z9 540 aa10.66□□□□□ -0.7
SH3D19-204ENST00000427414 FMNL2Q96PY5 1086 aa10.66□□□□□ -0.7
SH3D19-204ENST00000427414 DDX21Q9NR30 783 aaKnown RBP eCLIP10.66□□□□□ -0.7
SH3D19-204ENST00000427414 COL15A1P39059 1388 aa10.66□□□□□ -0.7
SH3D19-204ENST00000427414 TOGARAM1Q9Y4F4 1720 aa10.65□□□□□ -0.7
SH3D19-204ENST00000427414 SNRPA1P09661 255 aaKnown RBP10.65□□□□□ -0.7
SH3D19-204ENST00000427414 TEX13AQ9BXU3 409 aaPredicted RBP10.65□□□□□ -0.7
SH3D19-204ENST00000427414 TNNQ9UQP3 1299 aa10.65□□□□□ -0.7
SH3D19-204ENST00000427414 KCPQ6ZWJ8 1503 aa10.65□□□□□ -0.7
SH3D19-204ENST00000427414 ELL2O00472 640 aaPredicted RBP10.65□□□□□ -0.7
SH3D19-204ENST00000427414 ANKRD44Q8N8A2 993 aa10.65□□□□□ -0.7
SH3D19-204ENST00000427414 DDX58O95786 925 aaKnown RBP10.64□□□□□ -0.71
SH3D19-204ENST00000427414 CABP4P57796 275 aa10.64□□□□□ -0.71
SH3D19-204ENST00000427414 MIS18AQ9NYP9 233 aa10.64□□□□□ -0.71
SH3D19-204ENST00000427414 HMMRO75330 724 aa10.64□□□□□ -0.71
SH3D19-204ENST00000427414 NUCB1Q02818 461 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 KRT24Q2M2I5 525 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 LARP1Q6PKG0 1096 aaKnown RBP10.63□□□□□ -0.71
SH3D19-204ENST00000427414 TTC5Q8N0Z6 440 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 BTG4Q9NY30 223 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 ITGB4P16144 1822 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 BCL9O00512 1426 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 UTYO14607 1347 aa10.63□□□□□ -0.71
SH3D19-204ENST00000427414 DCTPP1Q9H773 170 aa10.62□□□□□ -0.71
SH3D19-204ENST00000427414 SPATA31A1Q5TZJ5 1347 aa10.62□□□□□ -0.71
SH3D19-204ENST00000427414 KSR2Q6VAB6 950 aa10.62□□□□□ -0.71
SH3D19-204ENST00000427414 GNAI2P04899 355 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 RREB1Q92766 1687 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 FKBP5Q13451 457 aaPredicted RBP10.61□□□□□ -0.71
SH3D19-204ENST00000427414 NFATC2IPQ8NCF5 419 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 SPATA31A5Q5VU36 1347 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 SPATA31A7Q8IWB4 1347 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 DNAAF4Q8WXU2 420 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 PDZRN3Q9UPQ7 1066 aa10.61□□□□□ -0.71
SH3D19-204ENST00000427414 NUP188Q5SRE5 1749 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 G2E3Q7L622 706 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 SRCIN1Q9C0H9 1055 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 MTX1Q13505 466 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 BEND3Q5T5X7 828 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 CEP85Q6P2H3 762 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 FNBP4Q8N3X1 1017 aaPredicted RBP10.6□□□□□ -0.71
SH3D19-204ENST00000427414 CERKQ8TCT0 537 aa10.6□□□□□ -0.71
SH3D19-204ENST00000427414 EXOC5O00471 708 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 PDIA6Q15084 440 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 VPS72Q15906 364 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 CHPF2Q9P2E5 772 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 THSD7AQ9UPZ6 1657 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 ADCY9O60503 1353 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 ARFGEF2Q9Y6D5 1785 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 RGL2O15211 777 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 KCNQ3O43525 872 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 ATP8B2P98198 1209 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 CHD1LQ86WJ1 897 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
SH3D19-204ENST00000427414 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
SH3D19-204ENST00000427414 LRP10Q7Z4F1 713 aa10.58□□□□□ -0.72
SH3D19-204ENST00000427414 STRN4Q9NRL3 753 aa10.58□□□□□ -0.72
SH3D19-204ENST00000427414 UNC5CLQ8IV45 518 aa10.58□□□□□ -0.72
SH3D19-204ENST00000427414 SIRT2Q8IXJ6 389 aa10.58□□□□□ -0.72
SH3D19-204ENST00000427414 ZNF496Q96IT1 587 aaPredicted RBP10.58□□□□□ -0.72
SH3D19-204ENST00000427414 SLKQ9H2G2 1235 aaPredicted RBP10.58□□□□□ -0.72
SH3D19-204ENST00000427414 RRAGDQ9NQL2 400 aaPredicted RBP10.58□□□□□ -0.72
SH3D19-204ENST00000427414 DOT1LQ8TEK3 1739 aa10.57□□□□□ -0.72
SH3D19-204ENST00000427414 RAB11FIP3O75154 756 aa10.57□□□□□ -0.72
SH3D19-204ENST00000427414 BECN1Q14457 450 aa10.57□□□□□ -0.72
SH3D19-204ENST00000427414 HSP90AB4PQ58FF6 505 aa10.57□□□□□ -0.72
SH3D19-204ENST00000427414 L1TD1Q5T7N2 865 aaKnown RBP10.57□□□□□ -0.72
SH3D19-204ENST00000427414 TMOD3Q9NYL9 352 aa10.57□□□□□ -0.72
SH3D19-204ENST00000427414 HMGB2P26583 209 aaKnown RBP10.57□□□□□ -0.72
SH3D19-204ENST00000427414 ARXQ96QS3 562 aa10.57□□□□□ -0.72
SH3D19-204ENST00000427414 AOX1Q06278 1338 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 POLA2Q14181 598 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 USP44Q9H0E7 712 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 UBTFL1P0CB47 393 aaPredicted RBP10.56□□□□□ -0.72
SH3D19-204ENST00000427414 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 SSH3Q8TE77 659 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 MEIS3Q99687 375 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 METTL22Q9BUU2 404 aaPredicted RBP10.56□□□□□ -0.72
SH3D19-204ENST00000427414 OSBPL3Q9H4L5 887 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 BCL9LQ86UU0 1499 aa10.56□□□□□ -0.72
SH3D19-204ENST00000427414 TJP1Q07157 1748 aa10.55□□□□□ -0.72
SH3D19-204ENST00000427414 EIF2S2P20042 333 aaKnown RBP10.55□□□□□ -0.72
SH3D19-204ENST00000427414 NEXNQ0ZGT2 675 aa10.55□□□□□ -0.72
SH3D19-204ENST00000427414 BMP2KLQ5H9B9 411 aa10.55□□□□□ -0.72
SH3D19-204ENST00000427414 PHAXQ9H814 394 aaKnown RBP10.55□□□□□ -0.72
SH3D19-204ENST00000427414 PI4KAP2A4QPH2 592 aa10.54□□□□□ -0.72
SH3D19-204ENST00000427414 SEC24BO95487 1268 aa10.54□□□□□ -0.72
SH3D19-204ENST00000427414 PI4KAP1Q8N8J0 262 aa10.54□□□□□ -0.72
SH3D19-204ENST00000427414 TRIM28Q13263 835 aaKnown RBP10.54□□□□□ -0.72
SH3D19-204ENST00000427414 SMARCC1Q92922 1105 aaPredicted RBP10.54□□□□□ -0.72
SH3D19-204ENST00000427414 AFDNP55196 1824 aaKnown RBP10.54□□□□□ -0.72
SH3D19-204ENST00000427414 F6X3S4 739 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 DDB1Q16531 1140 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 GLIPR1L2Q4G1C9 344 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 SLC4A10Q6U841 1118 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 MAP3K2Q9Y2U5 619 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
SH3D19-204ENST00000427414 ANKRD36CQ5JPF3 1778 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms