RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 NLGN1Q8N2Q7 840 aa22.69■■□□□ 1.22
LMCD1-204ENST00000426878 CCDC184Q52MB2 194 aa22.68■■□□□ 1.22
LMCD1-204ENST00000426878 THUMPD2Q9BTF0 503 aaKnown RBP22.68■■□□□ 1.22
LMCD1-204ENST00000426878 ZBTB1Q9Y2K1 713 aa22.68■■□□□ 1.22
LMCD1-204ENST00000426878 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
LMCD1-204ENST00000426878 GYS1P13807 737 aa22.67■■□□□ 1.22
LMCD1-204ENST00000426878 SNRPA1P09661 255 aaKnown RBP22.66■■□□□ 1.22
LMCD1-204ENST00000426878 USP42Q9H9J4 1324 aaKnown RBP22.66■■□□□ 1.22
LMCD1-204ENST00000426878 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
LMCD1-204ENST00000426878 BABAM1Q9NWV8 329 aa22.65■■□□□ 1.22
LMCD1-204ENST00000426878 MIS18AQ9NYP9 233 aa22.65■■□□□ 1.22
LMCD1-204ENST00000426878 RRP7AQ9Y3A4 280 aaKnown RBP22.65■■□□□ 1.22
LMCD1-204ENST00000426878 TRIM35Q9UPQ4 493 aa22.65■■□□□ 1.22
LMCD1-204ENST00000426878 EIF5P55010 431 aaKnown RBP22.64■■□□□ 1.21
LMCD1-204ENST00000426878 COL15A1P39059 1388 aa22.63■■□□□ 1.21
LMCD1-204ENST00000426878 CANXP27824 592 aaKnown RBP22.63■■□□□ 1.21
LMCD1-204ENST00000426878 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
LMCD1-204ENST00000426878 CD2APQ9Y5K6 639 aa22.63■■□□□ 1.21
LMCD1-204ENST00000426878 USP16Q9Y5T5 823 aa22.63■■□□□ 1.21
LMCD1-204ENST00000426878 MMP10P09238 476 aa22.62■■□□□ 1.21
LMCD1-204ENST00000426878 IL6STP40189 918 aaPredicted RBP22.62■■□□□ 1.21
LMCD1-204ENST00000426878 EIF4A1P60842 406 aaKnown RBP22.62■■□□□ 1.21
LMCD1-204ENST00000426878 MRS2Q9HD23 443 aa22.62■■□□□ 1.21
LMCD1-204ENST00000426878 SRP68Q9UHB9 627 aaKnown RBP22.62■■□□□ 1.21
LMCD1-204ENST00000426878 NARFQ9UHQ1 456 aa22.62■■□□□ 1.21
LMCD1-204ENST00000426878 A0A087WZG4 1122 aa22.61■■□□□ 1.21
LMCD1-204ENST00000426878 ZPR1O75312 459 aa22.61■■□□□ 1.21
LMCD1-204ENST00000426878 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
LMCD1-204ENST00000426878 A1BGP04217 495 aa22.6■■□□□ 1.21
LMCD1-204ENST00000426878 APAF1O14727 1248 aa22.59■■□□□ 1.21
LMCD1-204ENST00000426878 GIGYF1O75420 1035 aaPredicted RBP22.59■■□□□ 1.21
LMCD1-204ENST00000426878 FKBP8Q14318 412 aa22.59■■□□□ 1.21
LMCD1-204ENST00000426878 DCAF8L1A6NGE4 600 aa22.58■■□□□ 1.21
LMCD1-204ENST00000426878 USPL1Q5W0Q7 1092 aa22.58■■□□□ 1.21
LMCD1-204ENST00000426878 KLHL34Q8N239 644 aa22.58■■□□□ 1.21
LMCD1-204ENST00000426878 TSPYL4Q9UJ04 414 aa22.58■■□□□ 1.21
LMCD1-204ENST00000426878 CHL1O00533 1208 aa22.57■■□□□ 1.2
LMCD1-204ENST00000426878 TM4SF1P30408 202 aa22.57■■□□□ 1.2
LMCD1-204ENST00000426878 NLGN2Q8NFZ4 835 aa22.56■■□□□ 1.2
LMCD1-204ENST00000426878 BCL2L12Q9HB09 334 aa22.56■■□□□ 1.2
LMCD1-204ENST00000426878 PARP3Q9Y6F1 533 aa22.56■■□□□ 1.2
LMCD1-204ENST00000426878 LAMB4A4D0S4 1761 aa22.55■■□□□ 1.2
LMCD1-204ENST00000426878 GOLGB1Q14789 3259 aaKnown RBP22.55■■□□□ 1.2
LMCD1-204ENST00000426878 UTRNP46939 3433 aa22.55■■□□□ 1.2
LMCD1-204ENST00000426878 NBPF26B4DH59 902 aa22.54■■□□□ 1.2
LMCD1-204ENST00000426878 NBPF10Q6P3W6 841 aaKnown RBP22.54■■□□□ 1.2
LMCD1-204ENST00000426878 NPM2Q86SE8 214 aaKnown RBP22.54■■□□□ 1.2
LMCD1-204ENST00000426878 NBPF15Q8N660 670 aa22.54■■□□□ 1.2
LMCD1-204ENST00000426878 NCBP3Q53F19 620 aaKnown RBP22.53■■□□□ 1.2
LMCD1-204ENST00000426878 KIF13BQ9NQT8 1826 aa22.52■■□□□ 1.2
LMCD1-204ENST00000426878 CALD1Q05682 793 aaKnown RBP22.52■■□□□ 1.2
LMCD1-204ENST00000426878 DDR1Q08345 913 aa22.52■■□□□ 1.2
LMCD1-204ENST00000426878 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
LMCD1-204ENST00000426878 C10orf71Q711Q0 1435 aa22.51■■□□□ 1.19
LMCD1-204ENST00000426878 TBC1D2BQ9UPU7 963 aa22.51■■□□□ 1.19
LMCD1-204ENST00000426878 ZNF330Q9Y3S2 320 aaPredicted RBP22.51■■□□□ 1.19
LMCD1-204ENST00000426878 POLRMTO00411 1230 aaKnown RBP22.5■■□□□ 1.19
LMCD1-204ENST00000426878 RGL2O15211 777 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 CAMTA2O94983 1202 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 ZNF853P0CG23 659 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
LMCD1-204ENST00000426878 NFIXQ14938 502 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 CCDC27Q2M243 656 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 SCN7AQ01118 1682 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 ERBB4Q15303 1308 aa22.5■■□□□ 1.19
LMCD1-204ENST00000426878 DZIP3Q86Y13 1208 aaKnown RBP22.49■■□□□ 1.19
LMCD1-204ENST00000426878 TGFB2P61812 414 aa22.48■■□□□ 1.19
LMCD1-204ENST00000426878 IFT57Q9NWB7 429 aa22.48■■□□□ 1.19
LMCD1-204ENST00000426878 CLEC4GQ6UXB4 293 aa22.48■■□□□ 1.19
LMCD1-204ENST00000426878 LAS1LQ9Y4W2 734 aaKnown RBP22.48■■□□□ 1.19
LMCD1-204ENST00000426878 BCORQ6W2J9 1755 aa22.46■■□□□ 1.19
LMCD1-204ENST00000426878 NRXN2Q9P2S2 1712 aa22.46■■□□□ 1.19
LMCD1-204ENST00000426878 GNAI1P63096 354 aa22.46■■□□□ 1.19
LMCD1-204ENST00000426878 GPR162Q16538 588 aa22.46■■□□□ 1.19
LMCD1-204ENST00000426878 HOXB7P09629 217 aa22.45■■□□□ 1.18
LMCD1-204ENST00000426878 TBC1D9BQ66K14 1250 aa22.45■■□□□ 1.18
LMCD1-204ENST00000426878 MBIPQ9NS73 344 aa22.45■■□□□ 1.18
LMCD1-204ENST00000426878 SERPINB2P05120 415 aa22.44■■□□□ 1.18
LMCD1-204ENST00000426878 KIAA1551Q9HCM1 1747 aa22.44■■□□□ 1.18
LMCD1-204ENST00000426878 PXDNLA1KZ92 1463 aa22.44■■□□□ 1.18
LMCD1-204ENST00000426878 AFDNP55196 1824 aaKnown RBP22.43■■□□□ 1.18
LMCD1-204ENST00000426878 WWC1Q8IX03 1113 aa22.43■■□□□ 1.18
LMCD1-204ENST00000426878 ZNF652Q9Y2D9 606 aa22.43■■□□□ 1.18
LMCD1-204ENST00000426878 PDIA6Q15084 440 aa22.42■■□□□ 1.18
LMCD1-204ENST00000426878 LRP10Q7Z4F1 713 aa22.42■■□□□ 1.18
LMCD1-204ENST00000426878 CARMIL3Q8ND23 1372 aa22.42■■□□□ 1.18
LMCD1-204ENST00000426878 ERVV-1B6SEH8 477 aa22.41■■□□□ 1.18
LMCD1-204ENST00000426878 GRIN3BO60391 1043 aa22.41■■□□□ 1.18
LMCD1-204ENST00000426878 YBX3P16989 372 aaKnown RBP eCLIP22.41■■□□□ 1.18
LMCD1-204ENST00000426878 EIF2S2P20042 333 aaKnown RBP22.41■■□□□ 1.18
LMCD1-204ENST00000426878 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
LMCD1-204ENST00000426878 BICDL1Q6ZP65 573 aa22.41■■□□□ 1.18
LMCD1-204ENST00000426878 FAM9BQ8IZU0 186 aa22.41■■□□□ 1.18
LMCD1-204ENST00000426878 SETDB2Q96T68 719 aa22.41■■□□□ 1.18
LMCD1-204ENST00000426878 MYL6BP14649 208 aa22.4■■□□□ 1.18
LMCD1-204ENST00000426878 PELP1Q8IZL8 1130 aaKnown RBP22.4■■□□□ 1.18
LMCD1-204ENST00000426878 NGEFQ8N5V2 710 aa22.4■■□□□ 1.18
LMCD1-204ENST00000426878 IL16Q14005 1332 aa22.39■■□□□ 1.18
LMCD1-204ENST00000426878 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
LMCD1-204ENST00000426878 DPEP1P16444 411 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms