RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 MARCH10Q8NA82 808 aaPredicted RBP9.94□□□□□ -0.82
LINC01049-201ENST00000426840 RAPGEF4Q8WZA2 1011 aa9.94□□□□□ -0.82
LINC01049-201ENST00000426840 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
LINC01049-201ENST00000426840 ANP32CO43423 234 aa9.93□□□□□ -0.82
LINC01049-201ENST00000426840 PDE3BQ13370 1112 aa9.93□□□□□ -0.82
LINC01049-201ENST00000426840 CCDC184Q52MB2 194 aa9.93□□□□□ -0.82
LINC01049-201ENST00000426840 ZCRB1Q8TBF4 217 aaKnown RBP9.93□□□□□ -0.82
LINC01049-201ENST00000426840 NUDCQ9Y266 331 aa9.93□□□□□ -0.82
LINC01049-201ENST00000426840 RGPD1P0DJD0 1748 aa9.93□□□□□ -0.82
LINC01049-201ENST00000426840 PARP4Q9UKK3 1724 aaKnown RBP9.93□□□□□ -0.82
LINC01049-201ENST00000426840 MEGF6O75095 1541 aa9.92□□□□□ -0.82
LINC01049-201ENST00000426840 KDRP35968 1356 aa9.92□□□□□ -0.82
LINC01049-201ENST00000426840 WNK3Q9BYP7 1800 aa9.92□□□□□ -0.82
LINC01049-201ENST00000426840 HMOX1P09601 288 aa9.92□□□□□ -0.82
LINC01049-201ENST00000426840 OVOS2A0A0G2JMS6 1433 aa9.91□□□□□ -0.82
LINC01049-201ENST00000426840 DDX54Q8TDD1 881 aaKnown RBP9.91□□□□□ -0.82
LINC01049-201ENST00000426840 CYP27B1O15528 508 aa9.9□□□□□ -0.82
LINC01049-201ENST00000426840 FCHSD2O94868 740 aa9.9□□□□□ -0.82
LINC01049-201ENST00000426840 U2AF1L5P0DN76 240 aaPredicted RBP9.9□□□□□ -0.82
LINC01049-201ENST00000426840 U2AF1Q01081 240 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC01049-201ENST00000426840 FAM196AQ6ZSG2 479 aa9.9□□□□□ -0.82
LINC01049-201ENST00000426840 SPG7Q9UQ90 795 aa9.9□□□□□ -0.82
LINC01049-201ENST00000426840 TNS2Q63HR2 1409 aa9.9□□□□□ -0.83
LINC01049-201ENST00000426840 LRRC37A3O60309 1634 aa9.89□□□□□ -0.83
LINC01049-201ENST00000426840 AMOTQ4VCS5 1084 aa9.89□□□□□ -0.83
LINC01049-201ENST00000426840 PLEKHO1Q53GL0 409 aaPredicted RBP9.89□□□□□ -0.83
LINC01049-201ENST00000426840 DIEXFQ68CQ4 756 aaKnown RBP9.89□□□□□ -0.83
LINC01049-201ENST00000426840 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
LINC01049-201ENST00000426840 MTHFSDQ2M296 383 aaKnown RBP9.88□□□□□ -0.83
LINC01049-201ENST00000426840 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
LINC01049-201ENST00000426840 KCNV2Q8TDN2 545 aa9.88□□□□□ -0.83
LINC01049-201ENST00000426840 PHACTR3Q96KR7 559 aa9.88□□□□□ -0.83
LINC01049-201ENST00000426840 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
LINC01049-201ENST00000426840 BCL9O00512 1426 aa9.88□□□□□ -0.83
LINC01049-201ENST00000426840 PLEKHG2Q9H7P9 1386 aa9.88□□□□□ -0.83
LINC01049-201ENST00000426840 SOCS7O14512 581 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 PHKG2P15735 406 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 PRKAR2BP31323 418 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 PTF1AQ7RTS3 328 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 IFNL2Q8IZJ0 200 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 ADAMTS8Q9UP79 889 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 SHANK3Q9BYB0 1731 aa9.87□□□□□ -0.83
LINC01049-201ENST00000426840 PCDH11XQ9BZA7 1347 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 PCDH11YQ9BZA8 1340 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 KCNQ2O43526 872 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 TRIM37O94972 964 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 PKD1L3Q7Z443 1732 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 CCDC125Q86Z20 511 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 VSIG10Q8N0Z9 540 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 ZNF687Q8N1G0 1237 aa9.86□□□□□ -0.83
LINC01049-201ENST00000426840 PNISRQ8TF01 805 aaKnown RBP9.86□□□□□ -0.83
LINC01049-201ENST00000426840 PPP4R3BQ5MIZ7 849 aa9.85□□□□□ -0.83
LINC01049-201ENST00000426840 ZNF530Q6P9A1 599 aaPredicted RBP9.85□□□□□ -0.83
LINC01049-201ENST00000426840 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
LINC01049-201ENST00000426840 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
LINC01049-201ENST00000426840 MRS2Q9HD23 443 aa9.85□□□□□ -0.83
LINC01049-201ENST00000426840 KAT6BQ8WYB5 2073 aa9.85□□□□□ -0.83
LINC01049-201ENST00000426840 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
LINC01049-201ENST00000426840 PRIM1P49642 420 aaKnown RBP9.84□□□□□ -0.83
LINC01049-201ENST00000426840 WDR43Q15061 677 aaKnown RBP eCLIP9.84□□□□□ -0.83
LINC01049-201ENST00000426840 AKAP4Q5JQC9 854 aa9.84□□□□□ -0.83
LINC01049-201ENST00000426840 DDX12PQ92771 950 aa9.84□□□□□ -0.83
LINC01049-201ENST00000426840 PNNQ9H307 717 aaKnown RBP9.84□□□□□ -0.83
LINC01049-201ENST00000426840 PSDA5PKW4 1024 aaPredicted RBP9.83□□□□□ -0.84
LINC01049-201ENST00000426840 C1orf141Q5JVX7 400 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 MPRIPQ6WCQ1 1025 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 IL17REQ8NFR9 667 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 GAS2L2Q8NHY3 880 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 DCAF5Q96JK2 942 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 KRTAP3-3Q9BYR6 98 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 KRTAP3-2Q9BYR7 98 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 LGR6Q9HBX8 967 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
LINC01049-201ENST00000426840 CCER2I3L3R5 266 aa9.82□□□□□ -0.84
LINC01049-201ENST00000426840 RNMTO43148 476 aaKnown RBP9.82□□□□□ -0.84
LINC01049-201ENST00000426840 APBA3O96018 575 aa9.82□□□□□ -0.84
LINC01049-201ENST00000426840 HSP90AB1P08238 724 aaKnown RBP9.82□□□□□ -0.84
LINC01049-201ENST00000426840 FOSBP53539 338 aa9.82□□□□□ -0.84
LINC01049-201ENST00000426840 PDIA6Q15084 440 aa9.82□□□□□ -0.84
LINC01049-201ENST00000426840 RUNDC1Q96C34 613 aa9.82□□□□□ -0.84
LINC01049-201ENST00000426840 GNAT3A8MTJ3 354 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 ERVV-2B6SEH9 535 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 PLSCR1O15162 318 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 NFE2L2Q16236 605 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 DEFB132Q7Z7B7 95 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 CCDC146Q8IYE0 955 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 PIGBQ92521 554 aa9.81□□□□□ -0.84
LINC01049-201ENST00000426840 KDM6AO15550 1401 aaPredicted RBP9.81□□□□□ -0.84
LINC01049-201ENST00000426840 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 HTATSF1O43719 755 aaKnown RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 NEFMP07197 916 aa9.8□□□□□ -0.84
LINC01049-201ENST00000426840 TMPOP42166 694 aaKnown RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 EN1Q05925 392 aaPredicted RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 SF3B2Q13435 895 aaKnown RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 POTEEQ6S8J3 1075 aa9.8□□□□□ -0.84
LINC01049-201ENST00000426840 ARHGEF1Q92888 912 aaKnown RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 SYTL4Q96C24 671 aaPredicted RBP9.8□□□□□ -0.84
LINC01049-201ENST00000426840 CAMKK2Q96RR4 588 aa9.8□□□□□ -0.84
LINC01049-201ENST00000426840 PCDHGA10Q9Y5H3 936 aa9.8□□□□□ -0.84
LINC01049-201ENST00000426840 MAP3K5Q99683 1374 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms