RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 VWDEQ8N2E2 1590 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 COL3A1P02461 1466 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-206ENST00000426658 KDM4AO75164 1064 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 ZKSCAN1P17029 563 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-206ENST00000426658 BICD2Q8TD16 824 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 SIL1Q9H173 461 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 ASXL2Q76L83 1435 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 CEBPZQ03701 1054 aaKnown RBP12.22□□□□□ -0.45
CTCFL-206ENST00000426658 UHRF1BP1LA0JNW5 1464 aa12.22□□□□□ -0.45
CTCFL-206ENST00000426658 JARID2Q92833 1246 aaPredicted RBP12.21□□□□□ -0.45
CTCFL-206ENST00000426658 CCDC83Q8IWF9 413 aa12.21□□□□□ -0.45
CTCFL-206ENST00000426658 MROH2AA6NES4 1674 aa12.21□□□□□ -0.45
CTCFL-206ENST00000426658 ARAP3Q8WWN8 1544 aa12.21□□□□□ -0.45
CTCFL-206ENST00000426658 CNTROBQ8N137 903 aa12.21□□□□□ -0.46
CTCFL-206ENST00000426658 LIMCH1Q9UPQ0 1083 aa12.21□□□□□ -0.46
CTCFL-206ENST00000426658 PPRC1Q5VV67 1664 aaKnown RBP12.21□□□□□ -0.46
CTCFL-206ENST00000426658 H3BQV1 296 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 EIF4A2Q14240 407 aaKnown RBP12.2□□□□□ -0.46
CTCFL-206ENST00000426658 IFFO2Q5TF58 517 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 ABTB2Q8N961 1025 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 FLIIQ13045 1269 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 CLASRPQ8N2M8 674 aaKnown RBP12.2□□□□□ -0.46
CTCFL-206ENST00000426658 CHL1O00533 1208 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 CASTP20810 708 aaKnown RBP12.2□□□□□ -0.46
CTCFL-206ENST00000426658 CAMK4Q16566 473 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 JAKMIP1Q96N16 626 aaKnown RBP12.2□□□□□ -0.46
CTCFL-206ENST00000426658 TRIM5Q9C035 493 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 NLRP2Q9NX02 1062 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
CTCFL-206ENST00000426658 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
CTCFL-206ENST00000426658 F13A1P00488 732 aa12.19□□□□□ -0.46
CTCFL-206ENST00000426658 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
CTCFL-206ENST00000426658 INO80Q9ULG1 1556 aaPredicted RBP12.19□□□□□ -0.46
CTCFL-206ENST00000426658 CPA1P15085 419 aa12.19□□□□□ -0.46
CTCFL-206ENST00000426658 SYT1P21579 422 aa12.19□□□□□ -0.46
CTCFL-206ENST00000426658 TCEANC2Q96MN5 208 aa12.19□□□□□ -0.46
CTCFL-206ENST00000426658 DMTNQ08495 405 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 PPFIA3O75145 1194 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 NUP62CLQ9H1M0 184 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 RIOK3O14730 519 aaKnown RBP12.18□□□□□ -0.46
CTCFL-206ENST00000426658 KRT85P78386 507 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 DNM1Q05193 864 aaKnown RBP12.18□□□□□ -0.46
CTCFL-206ENST00000426658 MAP3K11Q16584 847 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 PRPF40BQ6NWY9 871 aaKnown RBP12.18□□□□□ -0.46
CTCFL-206ENST00000426658 FSD1Q9BTV5 496 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 PDRG1Q9NUG6 133 aa12.18□□□□□ -0.46
CTCFL-206ENST00000426658 ARHGAP31Q2M1Z3 1444 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 GJB2P29033 226 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 AK2P54819 239 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 ZC3H6P61129 1189 aaKnown RBP12.17□□□□□ -0.46
CTCFL-206ENST00000426658 G3BP1Q13283 466 aaKnown RBP eCLIP12.17□□□□□ -0.46
CTCFL-206ENST00000426658 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-206ENST00000426658 TNMDQ9H2S6 317 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 RGS12O14924 1447 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 ATP10DQ9P241 1426 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 GOLGA6L19H0YKK7 550 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 ADAMTS2O95450 1211 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 LARP1BQ659C4 914 aaKnown RBP12.17□□□□□ -0.46
CTCFL-206ENST00000426658 C16orf45Q96MC5 204 aaPredicted RBP12.17□□□□□ -0.46
CTCFL-206ENST00000426658 CYP46A1Q9Y6A2 500 aa12.17□□□□□ -0.46
CTCFL-206ENST00000426658 LMTK2Q8IWU2 1503 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 PNMA6EA0A0J9YXQ4 647 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 TAF7Q15545 349 aaPredicted RBP12.16□□□□□ -0.46
CTCFL-206ENST00000426658 C1orf141Q5JVX7 400 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 CCDC112Q8NEF3 446 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 ACEP12821 1306 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 BECN2A8MW95 431 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
CTCFL-206ENST00000426658 POGZQ7Z3K3 1410 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 HSPA4P34932 840 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 PPP1R42Q7Z4L9 355 aa12.16□□□□□ -0.46
CTCFL-206ENST00000426658 IGSF3O75054 1194 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTCFL-206ENST00000426658 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
CTCFL-206ENST00000426658 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
CTCFL-206ENST00000426658 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
CTCFL-206ENST00000426658 PTGS1P23219 599 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 KIAA0232Q92628 1395 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 CDK11BP21127 795 aaKnown RBP12.15□□□□□ -0.46
CTCFL-206ENST00000426658 AACSQ86V21 672 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 NECAB1Q8N987 351 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 PYCARDQ9ULZ3 195 aa12.15□□□□□ -0.46
CTCFL-206ENST00000426658 CCDC186Q7Z3E2 898 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 FAM200AQ8TCP9 573 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 TFIP11Q9UBB9 837 aaKnown RBP12.14□□□□□ -0.47
CTCFL-206ENST00000426658 TNNT1P13805 278 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 PDCP20941 246 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 MROH1Q8NDA8 1641 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 ABCC3O15438 1527 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 SSH2Q76I76 1423 aa12.14□□□□□ -0.47
CTCFL-206ENST00000426658 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms