RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 CT47B1P0C2W7 299 aaPredicted RBP31.09■■■□□ 2.57
APOE-202ENST00000425718 CYP19A1P11511 503 aaPredicted RBP31.09■■■□□ 2.57
APOE-202ENST00000425718 AK7Q96M32 723 aa31.09■■■□□ 2.57
APOE-202ENST00000425718 STK32BQ9NY57 414 aa31.09■■■□□ 2.57
APOE-202ENST00000425718 LINC00116Q8NCU8 138 aa31.08■■■□□ 2.57
APOE-202ENST00000425718 CDCA7LQ96GN5 454 aa31.08■■■□□ 2.57
APOE-202ENST00000425718 YTHDC1Q96MU7 727 aaKnown RBP31.08■■■□□ 2.57
APOE-202ENST00000425718 TWISTNBQ3B726 338 aaPredicted RBP31.07■■■□□ 2.56
APOE-202ENST00000425718 CCDC87Q9NVE4 849 aa31.07■■■□□ 2.56
APOE-202ENST00000425718 UBR3Q6ZT12 1888 aa31.06■■■□□ 2.56
APOE-202ENST00000425718 CRKLP46109 303 aaKnown RBP31.06■■■□□ 2.56
APOE-202ENST00000425718 EXOSC9Q06265 439 aaKnown RBP31.06■■■□□ 2.56
APOE-202ENST00000425718 ZNF428Q96B54 188 aa31.06■■■□□ 2.56
APOE-202ENST00000425718 KCNQ4P56696 695 aa31.05■■■□□ 2.56
APOE-202ENST00000425718 NPM2Q86SE8 214 aaKnown RBP31.05■■■□□ 2.56
APOE-202ENST00000425718 USP16Q9Y5T5 823 aa31.05■■■□□ 2.56
APOE-202ENST00000425718 HDGFL1Q5TGJ6 251 aa31.04■■■□□ 2.56
APOE-202ENST00000425718 C8orf58Q8NAV2 365 aa31.04■■■□□ 2.56
APOE-202ENST00000425718 FLAD1Q8NFF5 587 aa31.04■■■□□ 2.56
APOE-202ENST00000425718 CCDC30Q5VVM6 783 aa31.03■■■□□ 2.56
APOE-202ENST00000425718 ADRA2BP18089 450 aa31.02■■■□□ 2.56
APOE-202ENST00000425718 SLC15A2Q16348 729 aa31.02■■■□□ 2.56
APOE-202ENST00000425718 AKT1S1Q96B36 256 aa31.02■■■□□ 2.56
APOE-202ENST00000425718 RTCBQ9Y3I0 505 aaKnown RBP31.02■■■□□ 2.56
APOE-202ENST00000425718 EIF2S2P20042 333 aaKnown RBP31.01■■■□□ 2.55
APOE-202ENST00000425718 KRT24Q2M2I5 525 aa31.01■■■□□ 2.55
APOE-202ENST00000425718 PRAMEF22A3QJZ6 481 aa31■■■□□ 2.55
APOE-202ENST00000425718 GNPATO15228 680 aa31■■■□□ 2.55
APOE-202ENST00000425718 RPS6KA4O75676 772 aa31■■■□□ 2.55
APOE-202ENST00000425718 TFCP2L1Q9NZI6 479 aa31■■■□□ 2.55
APOE-202ENST00000425718 TUBGCP6Q96RT7 1819 aa31■■■□□ 2.55
APOE-202ENST00000425718 ELL2O00472 640 aaPredicted RBP30.99■■■□□ 2.55
APOE-202ENST00000425718 SSFA2P28290 1259 aa30.99■■■□□ 2.55
APOE-202ENST00000425718 IL6STP40189 918 aaPredicted RBP30.99■■■□□ 2.55
APOE-202ENST00000425718 STK31Q9BXU1 1019 aa30.99■■■□□ 2.55
APOE-202ENST00000425718 A0A087WZG4 1122 aa30.98■■■□□ 2.55
APOE-202ENST00000425718 VAMP4O75379 141 aa30.98■■■□□ 2.55
APOE-202ENST00000425718 INTS5Q6P9B9 1019 aaKnown RBP30.98■■■□□ 2.55
APOE-202ENST00000425718 TSPYL6Q8N831 410 aa30.98■■■□□ 2.55
APOE-202ENST00000425718 DBF4Q9UBU7 674 aaPredicted RBP30.98■■■□□ 2.55
APOE-202ENST00000425718 ZBTB1Q9Y2K1 713 aa30.97■■■□□ 2.55
APOE-202ENST00000425718 A1BGP04217 495 aa30.96■■■□□ 2.55
APOE-202ENST00000425718 DDX21Q9NR30 783 aaKnown RBP eCLIP30.96■■■□□ 2.55
APOE-202ENST00000425718 CANXP27824 592 aaKnown RBP30.94■■■□□ 2.54
APOE-202ENST00000425718 ZNF827Q17R98 1081 aa30.94■■■□□ 2.54
APOE-202ENST00000425718 ANO8Q9HCE9 1232 aaPredicted RBP30.94■■■□□ 2.54
APOE-202ENST00000425718 HYPKQ9NX55 129 aa30.94■■■□□ 2.54
APOE-202ENST00000425718 TRAPPC3LQ5T215 181 aa30.93■■■□□ 2.54
APOE-202ENST00000425718 EIF5P55010 431 aaKnown RBP30.92■■■□□ 2.54
APOE-202ENST00000425718 COL15A1P39059 1388 aa30.92■■■□□ 2.54
APOE-202ENST00000425718 ALDH1L2Q3SY69 923 aa30.91■■■□□ 2.54
APOE-202ENST00000425718 NECTIN2Q92692 538 aa30.9■■■□□ 2.54
APOE-202ENST00000425718 CHPF2Q9P2E5 772 aa30.9■■■□□ 2.54
APOE-202ENST00000425718 C4AP0C0L4 1744 aa30.9■■■□□ 2.54
APOE-202ENST00000425718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.89■■■□□ 2.54
APOE-202ENST00000425718 NBPF26B4DH59 902 aa30.88■■■□□ 2.53
APOE-202ENST00000425718 RFC4P35249 363 aa30.88■■■□□ 2.53
APOE-202ENST00000425718 NBPF10Q6P3W6 841 aaKnown RBP30.88■■■□□ 2.53
APOE-202ENST00000425718 NBPF15Q8N660 670 aa30.88■■■□□ 2.53
APOE-202ENST00000425718 RGL2O15211 777 aa30.87■■■□□ 2.53
APOE-202ENST00000425718 MYL6BP14649 208 aa30.87■■■□□ 2.53
APOE-202ENST00000425718 ZNF330Q9Y3S2 320 aaPredicted RBP30.87■■■□□ 2.53
APOE-202ENST00000425718 PDIA6Q15084 440 aa30.86■■■□□ 2.53
APOE-202ENST00000425718 SLC16A10Q8TF71 515 aa30.86■■■□□ 2.53
APOE-202ENST00000425718 PNPLA7Q6ZV29 1317 aa30.85■■■□□ 2.53
APOE-202ENST00000425718 ZPR1O75312 459 aa30.85■■■□□ 2.53
APOE-202ENST00000425718 PHF14O94880 888 aa30.85■■■□□ 2.53
APOE-202ENST00000425718 KIF6Q6ZMV9 814 aa30.85■■■□□ 2.53
APOE-202ENST00000425718 DDX58O95786 925 aaKnown RBP30.83■■■□□ 2.53
APOE-202ENST00000425718 SLC4A2P04920 1241 aa30.83■■■□□ 2.53
APOE-202ENST00000425718 ARHGEF1Q92888 912 aaKnown RBP30.83■■■□□ 2.53
APOE-202ENST00000425718 NARFQ9UHQ1 456 aa30.83■■■□□ 2.53
APOE-202ENST00000425718 BCORQ6W2J9 1755 aa30.83■■■□□ 2.53
APOE-202ENST00000425718 MSH5O43196 834 aa30.82■■■□□ 2.52
APOE-202ENST00000425718 R3HDM1Q15032 1099 aaKnown RBP30.82■■■□□ 2.52
APOE-202ENST00000425718 DZIP3Q86Y13 1208 aaKnown RBP30.82■■■□□ 2.52
APOE-202ENST00000425718 SCN7AQ01118 1682 aa30.81■■■□□ 2.52
APOE-202ENST00000425718 PIP4K2AP48426 406 aaPredicted RBP30.81■■■□□ 2.52
APOE-202ENST00000425718 ZNF652Q9Y2D9 606 aa30.81■■■□□ 2.52
APOE-202ENST00000425718 CASZ1Q86V15 1759 aa30.81■■■□□ 2.52
APOE-202ENST00000425718 BRPF1P55201 1214 aaPredicted RBP30.8■■■□□ 2.52
APOE-202ENST00000425718 PROSER3Q2NL68 480 aa30.8■■■□□ 2.52
APOE-202ENST00000425718 LRP10Q7Z4F1 713 aa30.8■■■□□ 2.52
APOE-202ENST00000425718 COL23A1Q86Y22 540 aaPredicted RBP30.8■■■□□ 2.52
APOE-202ENST00000425718 ARXQ96QS3 562 aa30.8■■■□□ 2.52
APOE-202ENST00000425718 USP42Q9H9J4 1324 aaKnown RBP30.79■■■□□ 2.52
APOE-202ENST00000425718 ERVV-1B6SEH8 477 aa30.79■■■□□ 2.52
APOE-202ENST00000425718 SMC4Q9NTJ3 1288 aa30.79■■■□□ 2.52
APOE-202ENST00000425718 NUP98P52948 1817 aa30.79■■■□□ 2.52
APOE-202ENST00000425718 RARSP54136 660 aaKnown RBP30.78■■■□□ 2.52
APOE-202ENST00000425718 CLEC4GQ6UXB4 293 aa30.78■■■□□ 2.52
APOE-202ENST00000425718 COPS6Q7L5N1 327 aa30.78■■■□□ 2.52
APOE-202ENST00000425718 XAGE3Q8WTP9 111 aa30.78■■■□□ 2.52
APOE-202ENST00000425718 MAP3K15Q6ZN16 1313 aa30.77■■■□□ 2.52
APOE-202ENST00000425718 ANXA1P04083 346 aa30.77■■■□□ 2.52
APOE-202ENST00000425718 SSH1Q8WYL5 1049 aa30.77■■■□□ 2.52
APOE-202ENST00000425718 KIF16BQ96L93 1317 aa30.76■■■□□ 2.52
APOE-202ENST00000425718 AMIGO3Q86WK7 504 aa30.76■■■□□ 2.51
APOE-202ENST00000425718 AIMP1Q12904 312 aaKnown RBP30.75■■■□□ 2.51
APOE-202ENST00000425718 FLIIQ13045 1269 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms