RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 GSTTP1A0A1W2PQM5 241 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 DZIP1Q86YF9 867 aaKnown RBP12.88□□□□□ -0.35
TNC-203ENST00000423613 ARAP1Q96P48 1450 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
TNC-203ENST00000423613 RSRC1Q96IZ7 334 aaKnown RBP12.88□□□□□ -0.35
TNC-203ENST00000423613 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
TNC-203ENST00000423613 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
TNC-203ENST00000423613 C9orf84Q5VXU9 1444 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 CCDC184Q52MB2 194 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
TNC-203ENST00000423613 BLOC1S2Q6QNY1 142 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
TNC-203ENST00000423613 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 SRGAP3O43295 1099 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 ZWINTO95229 277 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 CWC27Q6UX04 472 aaKnown RBP12.87□□□□□ -0.35
TNC-203ENST00000423613 RASSF4Q9H2L5 321 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 ANKIB1Q9P2G1 1089 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 PPP4R3AQ6IN85 833 aa12.87□□□□□ -0.35
TNC-203ENST00000423613 SYNJ2O15056 1496 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 NOL3O60936 208 aaKnown RBP12.86□□□□□ -0.35
TNC-203ENST00000423613 SPA17Q15506 151 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 ZNF692Q9BU19 519 aaPredicted RBP12.86□□□□□ -0.35
TNC-203ENST00000423613 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 KIF5BP33176 963 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 MXRA7P84157 204 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 PDE1CQ14123 709 aaPredicted RBP12.86□□□□□ -0.35
TNC-203ENST00000423613 HLTFQ14527 1009 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNC-203ENST00000423613 CEP135Q66GS9 1140 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 CEP120Q8N960 986 aa12.86□□□□□ -0.35
TNC-203ENST00000423613 TNIP1Q15025 636 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 C16orf71Q8IYS4 520 aaPredicted RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 ZNF397Q8NF99 534 aaPredicted RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 DNAI2Q9GZS0 605 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 ZSWIM4Q9H7M6 989 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 HSF2BPO75031 334 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 ZC3H6P61129 1189 aaKnown RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 RRS1Q15050 365 aaKnown RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 ZSCAN25Q6NSZ9 544 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 HMGB2P26583 209 aaKnown RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 ANAPC15P60006 121 aa12.85□□□□□ -0.35
TNC-203ENST00000423613 CTNNBL1Q8WYA6 563 aaPredicted RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
TNC-203ENST00000423613 IMMTQ16891 758 aaKnown RBP12.84□□□□□ -0.35
TNC-203ENST00000423613 CEP112Q8N8E3 955 aa12.84□□□□□ -0.35
TNC-203ENST00000423613 FEZ2Q9UHY8 353 aaPredicted RBP12.84□□□□□ -0.35
TNC-203ENST00000423613 RTEL1-TNFRSF6BF6WH68 1400 aa12.84□□□□□ -0.35
TNC-203ENST00000423613 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
TNC-203ENST00000423613 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
TNC-203ENST00000423613 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
TNC-203ENST00000423613 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
TNC-203ENST00000423613 A0A1B0GUL7 405 aa12.84□□□□□ -0.35
TNC-203ENST00000423613 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
TNC-203ENST00000423613 UBAC1Q9BSL1 405 aa12.84□□□□□ -0.35
TNC-203ENST00000423613 ZFYP08048 801 aaPredicted RBP12.83□□□□□ -0.36
TNC-203ENST00000423613 CCDC121Q6ZUS5 278 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 USP25Q9UHP3 1055 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
TNC-203ENST00000423613 NOL7Q9UMY1 257 aaKnown RBP12.83□□□□□ -0.36
TNC-203ENST00000423613 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
TNC-203ENST00000423613 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 ABCF2Q9UG63 623 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 CAPN2P17655 700 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 TCHPQ9BT92 498 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 CLEC11AQ9Y240 323 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 BTBD11A6QL63 1104 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 RFC1P35251 1148 aaPredicted RBP12.83□□□□□ -0.36
TNC-203ENST00000423613 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
TNC-203ENST00000423613 ERICH3Q5RHP9 1530 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 RPUSD2Q8IZ73 545 aaKnown RBP12.82□□□□□ -0.36
TNC-203ENST00000423613 RPGRQ92834 1020 aaKnown RBP12.82□□□□□ -0.36
TNC-203ENST00000423613 RBM28Q9NW13 759 aaKnown RBP12.82□□□□□ -0.36
TNC-203ENST00000423613 CDKL5O76039 1030 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
TNC-203ENST00000423613 KRBA2Q6ZNG9 492 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 VTI1AQ96AJ9 217 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 ZNF652Q9Y2D9 606 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 STARD3NLO95772 234 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 BANK1Q8NDB2 785 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 FLIIQ13045 1269 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 ATRIPQ8WXE1 791 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 TOP1P11387 765 aaKnown RBP12.82□□□□□ -0.36
TNC-203ENST00000423613 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 RPAP2Q8IXW5 612 aaPredicted RBP12.82□□□□□ -0.36
TNC-203ENST00000423613 CPLX3Q8WVH0 158 aa12.82□□□□□ -0.36
TNC-203ENST00000423613 PRG4Q92954 1404 aaPredicted RBP12.81□□□□□ -0.36
TNC-203ENST00000423613 GOLIM4O00461 696 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 OTUD6BQ8N6M0 293 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 GRIN2BQ13224 1484 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 SEPT14Q6ZU15 432 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 PSMD1Q99460 953 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 CASTP20810 708 aaKnown RBP12.81□□□□□ -0.36
TNC-203ENST00000423613 CTNNA3Q9UI47 895 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
TNC-203ENST00000423613 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms