RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HSPA6P17066 643 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 ZNF157P51786 506 aaPredicted RBP4.38□□□□□ -1.71
TOP2A-201ENST00000423485 TNFAIP1Q13829 316 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 SLC10A4Q96EP9 437 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 GPATCH3Q96I76 525 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 CARD11Q9BXL7 1154 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 MSRAQ9UJ68 235 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 TAF12Q16514 161 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 TPTE2Q6XPS3 522 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 CPLX3Q8WVH0 158 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 PRDM5Q9NQX1 630 aaPredicted RBP4.38□□□□□ -1.71
TOP2A-201ENST00000423485 EVI5O60447 810 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 NBR1Q14596 966 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 GRIPAP1Q4V328 841 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 RETREG2Q8NC44 543 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 DCAF11Q8TEB1 546 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 CABP5Q9NP86 173 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 PCDH10Q9P2E7 1040 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 NAP1L2Q9ULW6 460 aaPredicted RBP4.38□□□□□ -1.71
TOP2A-201ENST00000423485 EHBP1L1Q8N3D4 1523 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 IL2RBP14784 551 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 FSTL1Q12841 308 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 CFAP74Q9C0B2 1584 aa4.38□□□□□ -1.71
TOP2A-201ENST00000423485 PIK3C2BO00750 1634 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 ZBBXA8MT70 800 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 PIAS4Q8N2W9 510 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 ZC3H12CQ9C0D7 883 aaKnown RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 INO80Q9ULG1 1556 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 ATP10AO60312 1499 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 UQCRHLA0A096LP55 91 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 SUPT20HL1Q3ZLR7 823 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 DIEXFQ68CQ4 756 aaKnown RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 RRAGCQ9HB90 399 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 ZMYM3Q14202 1370 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 IREB2P48200 963 aaKnown RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 COG6Q9Y2V7 657 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 BRD4O60885 1362 aaPredicted RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 CELSR2Q9HCU4 2923 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 EIF5BO60841 1220 aaKnown RBP4.37□□□□□ -1.71
TOP2A-201ENST00000423485 IGFBP4P22692 258 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 PPP2R5DQ14738 602 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 ZFYVE28Q9HCC9 887 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 MED14O60244 1454 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 CAMSAP1Q5T5Y3 1602 aa4.37□□□□□ -1.71
TOP2A-201ENST00000423485 ST20-MTHFSA0A0A6YYL1 179 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 KDM4FA0A1W2PPD8 638 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 TOMM70O94826 608 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 MTHFSP49914 203 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 CCNA1P78396 465 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 ATP2B2Q01814 1243 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 NONOQ15233 471 aaKnown RBP eCLIP4.36□□□□□ -1.71
TOP2A-201ENST00000423485 CASC1Q6TDU7 716 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 TAOK3Q9H2K8 898 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 JAG2Q9Y219 1238 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 UNC13BO14795 1591 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 CRYBG1Q9Y4K1 1723 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 SUGP1Q8IWZ8 645 aaKnown RBP4.36□□□□□ -1.71
TOP2A-201ENST00000423485 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.36□□□□□ -1.71
TOP2A-201ENST00000423485 TNPO1Q92973 898 aaKnown RBP4.36□□□□□ -1.71
TOP2A-201ENST00000423485 ACTN1P12814 892 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 PPP4R3AQ6IN85 833 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 RTKN2Q8IZC4 609 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 CNBD1Q8NA66 436 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 NUDT16Q96DE0 195 aaKnown RBP4.36□□□□□ -1.71
TOP2A-201ENST00000423485 TTC21AQ8NDW8 1320 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 PPIP5K2O43314 1243 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 CCDC93Q567U6 631 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 RPGRIP1LQ68CZ1 1315 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 MADDQ8WXG6 1647 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 OSBPP22059 807 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 DCAF15Q66K64 600 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 CC2D2BQ6DHV5 1058 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 ZCRB1Q8TBF4 217 aaKnown RBP4.36□□□□□ -1.71
TOP2A-201ENST00000423485 RSPH6AQ9H0K4 717 aa4.36□□□□□ -1.71
TOP2A-201ENST00000423485 KBTBD13C9JR72 458 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 IRX3P78415 501 aaPredicted RBP4.35□□□□□ -1.71
TOP2A-201ENST00000423485 GNL2Q13823 731 aaKnown RBP4.35□□□□□ -1.71
TOP2A-201ENST00000423485 TTLL6Q8N841 843 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 ZKSCAN4Q969J2 545 aaPredicted RBP4.35□□□□□ -1.71
TOP2A-201ENST00000423485 CDK19Q9BWU1 502 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 THRAP3Q9Y2W1 955 aaKnown RBP4.35□□□□□ -1.71
TOP2A-201ENST00000423485 TMEM94Q12767 1356 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 KCNJ6P48051 423 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 SLC27A3Q5K4L6 730 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 RIC3Q7Z5B4 369 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 A2MP01023 1474 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 FANCIQ9NVI1 1328 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 NBPF26B4DH59 902 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 CHRNA2Q15822 529 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 PKN2Q16513 984 aaKnown RBP4.35□□□□□ -1.71
TOP2A-201ENST00000423485 CNNM1Q9NRU3 951 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 SLC9C1Q4G0N8 1177 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 GRIN2AQ12879 1464 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 CCDC141Q6ZP82 1450 aa4.35□□□□□ -1.71
TOP2A-201ENST00000423485 ZNF697Q5TEC3 545 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 NLRP3Q96P20 1036 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 UPF3BQ9BZI7 483 aaKnown RBP4.34□□□□□ -1.71
TOP2A-201ENST00000423485 PREX2Q70Z35 1606 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 M0QZ92 97 aa4.34□□□□□ -1.71
TOP2A-201ENST00000423485 DEFB132Q7Z7B7 95 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms