RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 UBR2Q8IWV8 1755 aa18.39■□□□□ 0.54
CNBP-201ENST00000422453 KCNQ3O43525 872 aa18.39■□□□□ 0.53
CNBP-201ENST00000422453 NPM2Q86SE8 214 aaKnown RBP18.39■□□□□ 0.53
CNBP-201ENST00000422453 SOS1Q07889 1333 aaPredicted RBP18.39■□□□□ 0.53
CNBP-201ENST00000422453 PNISRQ8TF01 805 aaKnown RBP18.38■□□□□ 0.53
CNBP-201ENST00000422453 SRP68Q9UHB9 627 aaKnown RBP18.38■□□□□ 0.53
CNBP-201ENST00000422453 USP42Q9H9J4 1324 aaKnown RBP18.38■□□□□ 0.53
CNBP-201ENST00000422453 RIPK4P57078 832 aa18.38■□□□□ 0.53
CNBP-201ENST00000422453 PARP3Q9Y6F1 533 aa18.38■□□□□ 0.53
CNBP-201ENST00000422453 CCDC146Q8IYE0 955 aa18.37■□□□□ 0.53
CNBP-201ENST00000422453 SNRPA1P09661 255 aaKnown RBP18.36■□□□□ 0.53
CNBP-201ENST00000422453 LMOD3Q0VAK6 560 aa18.36■□□□□ 0.53
CNBP-201ENST00000422453 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
CNBP-201ENST00000422453 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
CNBP-201ENST00000422453 COL15A1P39059 1388 aa18.36■□□□□ 0.53
CNBP-201ENST00000422453 A0A087WZG4 1122 aa18.35■□□□□ 0.53
CNBP-201ENST00000422453 FKBP8Q14318 412 aa18.35■□□□□ 0.53
CNBP-201ENST00000422453 USPL1Q5W0Q7 1092 aa18.35■□□□□ 0.53
CNBP-201ENST00000422453 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
CNBP-201ENST00000422453 ADAMTS8Q9UP79 889 aa18.35■□□□□ 0.53
CNBP-201ENST00000422453 DLG5Q8TDM6 1919 aa18.35■□□□□ 0.53
CNBP-201ENST00000422453 TMPOP42166 694 aaKnown RBP18.34■□□□□ 0.53
CNBP-201ENST00000422453 THUMPD2Q9BTF0 503 aaKnown RBP18.34■□□□□ 0.53
CNBP-201ENST00000422453 NARFQ9UHQ1 456 aa18.34■□□□□ 0.53
CNBP-201ENST00000422453 C4AP0C0L4 1744 aa18.34■□□□□ 0.53
CNBP-201ENST00000422453 YY1P25490 414 aa18.34■□□□□ 0.53
CNBP-201ENST00000422453 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
CNBP-201ENST00000422453 A1BGP04217 495 aa18.33■□□□□ 0.52
CNBP-201ENST00000422453 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
CNBP-201ENST00000422453 USP16Q9Y5T5 823 aa18.33■□□□□ 0.52
CNBP-201ENST00000422453 UTRNP46939 3433 aa18.33■□□□□ 0.52
CNBP-201ENST00000422453 ANP32CO43423 234 aa18.32■□□□□ 0.52
CNBP-201ENST00000422453 IL6STP40189 918 aaPredicted RBP18.32■□□□□ 0.52
CNBP-201ENST00000422453 RRP7AQ9Y3A4 280 aaKnown RBP18.32■□□□□ 0.52
CNBP-201ENST00000422453 GOLGB1Q14789 3259 aaKnown RBP18.3■□□□□ 0.52
CNBP-201ENST00000422453 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
CNBP-201ENST00000422453 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
CNBP-201ENST00000422453 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
CNBP-201ENST00000422453 TM4SF1P30408 202 aa18.28■□□□□ 0.52
CNBP-201ENST00000422453 TGFB2P61812 414 aa18.28■□□□□ 0.52
CNBP-201ENST00000422453 TBC1D2BQ9UPU7 963 aa18.28■□□□□ 0.52
CNBP-201ENST00000422453 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
CNBP-201ENST00000422453 DDR1Q08345 913 aa18.28■□□□□ 0.52
CNBP-201ENST00000422453 WWC3Q9ULE0 1092 aa18.28■□□□□ 0.52
CNBP-201ENST00000422453 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
CNBP-201ENST00000422453 YBX3P16989 372 aaKnown RBP eCLIP18.27■□□□□ 0.521e-9■■□□□ 12.4
CNBP-201ENST00000422453 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.52
CNBP-201ENST00000422453 NFIXQ14938 502 aa18.27■□□□□ 0.52
CNBP-201ENST00000422453 BABAM1Q9NWV8 329 aa18.27■□□□□ 0.52
CNBP-201ENST00000422453 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
CNBP-201ENST00000422453 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
CNBP-201ENST00000422453 DZIP3Q86Y13 1208 aaKnown RBP18.26■□□□□ 0.51
CNBP-201ENST00000422453 BCL2L12Q9HB09 334 aa18.26■□□□□ 0.51
CNBP-201ENST00000422453 LAS1LQ9Y4W2 734 aaKnown RBP18.25■□□□□ 0.51
CNBP-201ENST00000422453 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
CNBP-201ENST00000422453 A0A0G2JLW4 131 aa18.25■□□□□ 0.51
CNBP-201ENST00000422453 SERPINB2P05120 415 aa18.24■□□□□ 0.51
CNBP-201ENST00000422453 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
CNBP-201ENST00000422453 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
CNBP-201ENST00000422453 APAF1O14727 1248 aa18.23■□□□□ 0.51
CNBP-201ENST00000422453 MRS2Q9HD23 443 aa18.23■□□□□ 0.51
CNBP-201ENST00000422453 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 DPEP1P16444 411 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 TBC1D9BQ66K14 1250 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 ZNF652Q9Y2D9 606 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 NPHP1O15259 732 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
CNBP-201ENST00000422453 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 SETDB2Q96T68 719 aa18.22■□□□□ 0.51
CNBP-201ENST00000422453 KIF13BQ9NQT8 1826 aa18.21■□□□□ 0.51
CNBP-201ENST00000422453 NGEFQ8N5V2 710 aa18.21■□□□□ 0.51
CNBP-201ENST00000422453 BCS1LQ9Y276 419 aa18.21■□□□□ 0.51
CNBP-201ENST00000422453 CHD4Q14839 1912 aa18.21■□□□□ 0.5
CNBP-201ENST00000422453 CLEC4GQ6UXB4 293 aa18.2■□□□□ 0.5
CNBP-201ENST00000422453 CHL1O00533 1208 aa18.19■□□□□ 0.5
CNBP-201ENST00000422453 MYL6BP14649 208 aa18.19■□□□□ 0.5
CNBP-201ENST00000422453 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
CNBP-201ENST00000422453 CALD1Q05682 793 aaKnown RBP18.19■□□□□ 0.5
CNBP-201ENST00000422453 PIM2Q9P1W9 311 aa18.19■□□□□ 0.5
CNBP-201ENST00000422453 CARMIL3Q8ND23 1372 aa18.19■□□□□ 0.5
CNBP-201ENST00000422453 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
CNBP-201ENST00000422453 SCN7AQ01118 1682 aa18.18■□□□□ 0.5
CNBP-201ENST00000422453 N4BP2Q86UW6 1770 aaPredicted RBP18.18■□□□□ 0.5
CNBP-201ENST00000422453 ERBB4Q15303 1308 aa18.17■□□□□ 0.5
CNBP-201ENST00000422453 CHRNA5P30532 468 aa18.17■□□□□ 0.5
CNBP-201ENST00000422453 KIF6Q6ZMV9 814 aa18.17■□□□□ 0.5
CNBP-201ENST00000422453 CFAP44Q96MT7 982 aa18.17■□□□□ 0.5
CNBP-201ENST00000422453 DALRD3Q5D0E6 543 aaKnown RBP18.16■□□□□ 0.5
CNBP-201ENST00000422453 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
CNBP-201ENST00000422453 RGL2O15211 777 aa18.15■□□□□ 0.5
CNBP-201ENST00000422453 KCNA3P22001 575 aa18.15■□□□□ 0.5
CNBP-201ENST00000422453 ST5P78524 1137 aa18.15■□□□□ 0.5
CNBP-201ENST00000422453 CNBD1Q8NA66 436 aa18.15■□□□□ 0.5
CNBP-201ENST00000422453 H0YIN7 160 aa18.15■□□□□ 0.5
CNBP-201ENST00000422453 NBPF5PQ86XG9 351 aaPredicted RBP18.15■□□□□ 0.5
CNBP-201ENST00000422453 NIP7Q9Y221 180 aaKnown RBP eCLIP18.15■□□□□ 0.5
CNBP-201ENST00000422453 PDE6BP35913 854 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms