RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 UTRNP46939 3433 aa19.63■□□□□ 0.73
LINC01840-201ENST00000421870 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
LINC01840-201ENST00000421870 ZNF316A6NFI3 1004 aaPredicted RBP19.62■□□□□ 0.73
LINC01840-201ENST00000421870 EIF5P55010 431 aaKnown RBP19.62■□□□□ 0.73
LINC01840-201ENST00000421870 KIF13BQ9NQT8 1826 aa19.62■□□□□ 0.73
LINC01840-201ENST00000421870 CHD4Q14839 1912 aa19.61■□□□□ 0.73
LINC01840-201ENST00000421870 FKBP8Q14318 412 aa19.61■□□□□ 0.73
LINC01840-201ENST00000421870 GPR162Q16538 588 aa19.61■□□□□ 0.73
LINC01840-201ENST00000421870 NARFQ9UHQ1 456 aa19.61■□□□□ 0.73
LINC01840-201ENST00000421870 ZPR1O75312 459 aa19.6■□□□□ 0.73
LINC01840-201ENST00000421870 CANXP27824 592 aaKnown RBP19.6■□□□□ 0.73
LINC01840-201ENST00000421870 TM4SF1P30408 202 aa19.6■□□□□ 0.73
LINC01840-201ENST00000421870 USP16Q9Y5T5 823 aa19.6■□□□□ 0.73
LINC01840-201ENST00000421870 GOLGB1Q14789 3259 aaKnown RBP19.59■□□□□ 0.73
LINC01840-201ENST00000421870 COL15A1P39059 1388 aa19.59■□□□□ 0.73
LINC01840-201ENST00000421870 SNRPA1P09661 255 aaKnown RBP19.59■□□□□ 0.73
LINC01840-201ENST00000421870 TMPOP42166 694 aaKnown RBP19.59■□□□□ 0.73
LINC01840-201ENST00000421870 USPL1Q5W0Q7 1092 aa19.59■□□□□ 0.73
LINC01840-201ENST00000421870 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
LINC01840-201ENST00000421870 ADAMTS8Q9UP79 889 aa19.59■□□□□ 0.73
LINC01840-201ENST00000421870 A1BGP04217 495 aa19.58■□□□□ 0.72
LINC01840-201ENST00000421870 IL6STP40189 918 aaPredicted RBP19.58■□□□□ 0.72
LINC01840-201ENST00000421870 RIPK4P57078 832 aa19.58■□□□□ 0.72
LINC01840-201ENST00000421870 MIS18AQ9NYP9 233 aa19.58■□□□□ 0.72
LINC01840-201ENST00000421870 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
LINC01840-201ENST00000421870 A0A087WZG4 1122 aa19.57■□□□□ 0.72
LINC01840-201ENST00000421870 YY1P25490 414 aa19.57■□□□□ 0.72
LINC01840-201ENST00000421870 TGFB2P61812 414 aa19.57■□□□□ 0.72
LINC01840-201ENST00000421870 WDR43Q15061 677 aaKnown RBP eCLIP19.57■□□□□ 0.72
LINC01840-201ENST00000421870 RUNDC1Q96C34 613 aa19.57■□□□□ 0.72
LINC01840-201ENST00000421870 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
LINC01840-201ENST00000421870 KDM3BQ7LBC6 1761 aa19.57■□□□□ 0.72
LINC01840-201ENST00000421870 PRAMEF22A3QJZ6 481 aa19.56■□□□□ 0.72
LINC01840-201ENST00000421870 YBX3P16989 372 aaKnown RBP eCLIP19.56■□□□□ 0.72
LINC01840-201ENST00000421870 THUMPD2Q9BTF0 503 aaKnown RBP19.56■□□□□ 0.72
LINC01840-201ENST00000421870 DDR1Q08345 913 aa19.55■□□□□ 0.72
LINC01840-201ENST00000421870 KIAA1551Q9HCM1 1747 aa19.55■□□□□ 0.72
LINC01840-201ENST00000421870 POLRMTO00411 1230 aaKnown RBP19.54■□□□□ 0.72
LINC01840-201ENST00000421870 GRIN3BO60391 1043 aa19.54■□□□□ 0.72
LINC01840-201ENST00000421870 CCDC146Q8IYE0 955 aa19.54■□□□□ 0.72
LINC01840-201ENST00000421870 C10orf71Q711Q0 1435 aa19.53■□□□□ 0.72
LINC01840-201ENST00000421870 EIF4A1P60842 406 aaKnown RBP19.53■□□□□ 0.72
LINC01840-201ENST00000421870 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
LINC01840-201ENST00000421870 NFIXQ14938 502 aa19.53■□□□□ 0.72
LINC01840-201ENST00000421870 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
LINC01840-201ENST00000421870 BABAM1Q9NWV8 329 aa19.53■□□□□ 0.72
LINC01840-201ENST00000421870 N4BP2Q86UW6 1770 aaPredicted RBP19.52■□□□□ 0.72
LINC01840-201ENST00000421870 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
LINC01840-201ENST00000421870 AFDNP55196 1824 aaKnown RBP19.52■□□□□ 0.72
LINC01840-201ENST00000421870 TRIM35Q9UPQ4 493 aa19.51■□□□□ 0.71
LINC01840-201ENST00000421870 TBC1D2BQ9UPU7 963 aa19.51■□□□□ 0.71
LINC01840-201ENST00000421870 NRXN2Q9P2S2 1712 aa19.51■□□□□ 0.71
LINC01840-201ENST00000421870 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
LINC01840-201ENST00000421870 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
LINC01840-201ENST00000421870 NBPF26B4DH59 902 aa19.5■□□□□ 0.71
LINC01840-201ENST00000421870 NBPF10Q6P3W6 841 aaKnown RBP19.5■□□□□ 0.71
LINC01840-201ENST00000421870 NBPF15Q8N660 670 aa19.5■□□□□ 0.71
LINC01840-201ENST00000421870 RRP7AQ9Y3A4 280 aaKnown RBP19.5■□□□□ 0.71
LINC01840-201ENST00000421870 KCNA3P22001 575 aa19.49■□□□□ 0.71
LINC01840-201ENST00000421870 BRCA1P38398 1863 aaKnown RBP19.49■□□□□ 0.71
LINC01840-201ENST00000421870 LAMB4A4D0S4 1761 aa19.49■□□□□ 0.71
LINC01840-201ENST00000421870 CAMTA2O94983 1202 aa19.48■□□□□ 0.71
LINC01840-201ENST00000421870 SERPINB2P05120 415 aa19.48■□□□□ 0.71
LINC01840-201ENST00000421870 NEUROD2Q15784 382 aa19.48■□□□□ 0.71
LINC01840-201ENST00000421870 CCDC184Q52MB2 194 aa19.48■□□□□ 0.71
LINC01840-201ENST00000421870 NPM2Q86SE8 214 aaKnown RBP19.48■□□□□ 0.71
LINC01840-201ENST00000421870 ZNF330Q9Y3S2 320 aaPredicted RBP19.48■□□□□ 0.71
LINC01840-201ENST00000421870 SCN7AQ01118 1682 aa19.47■□□□□ 0.71
LINC01840-201ENST00000421870 DPEP1P16444 411 aa19.47■□□□□ 0.71
LINC01840-201ENST00000421870 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
LINC01840-201ENST00000421870 TBC1D9BQ66K14 1250 aa19.47■□□□□ 0.71
LINC01840-201ENST00000421870 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
LINC01840-201ENST00000421870 TSPYL4Q9UJ04 414 aa19.47■□□□□ 0.71
LINC01840-201ENST00000421870 CHL1O00533 1208 aa19.46■□□□□ 0.71
LINC01840-201ENST00000421870 RGL2O15211 777 aa19.46■□□□□ 0.71
LINC01840-201ENST00000421870 CLEC4GQ6UXB4 293 aa19.46■□□□□ 0.71
LINC01840-201ENST00000421870 BCORQ6W2J9 1755 aa19.46■□□□□ 0.71
LINC01840-201ENST00000421870 APAF1O14727 1248 aa19.43■□□□□ 0.7
LINC01840-201ENST00000421870 ANP32CO43423 234 aa19.43■□□□□ 0.7
LINC01840-201ENST00000421870 BICDL1Q6ZP65 573 aa19.43■□□□□ 0.7
LINC01840-201ENST00000421870 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
LINC01840-201ENST00000421870 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
LINC01840-201ENST00000421870 SETDB2Q96T68 719 aa19.42■□□□□ 0.7
LINC01840-201ENST00000421870 ARFGEF1Q9Y6D6 1849 aa19.41■□□□□ 0.7
LINC01840-201ENST00000421870 ZNF784Q8NCA9 323 aaPredicted RBP19.41■□□□□ 0.7
LINC01840-201ENST00000421870 BCS1LQ9Y276 419 aa19.41■□□□□ 0.7
LINC01840-201ENST00000421870 ERBB4Q15303 1308 aa19.41■□□□□ 0.7
LINC01840-201ENST00000421870 CARMIL3Q8ND23 1372 aa19.41■□□□□ 0.7
LINC01840-201ENST00000421870 CHRNA5P30532 468 aa19.4■□□□□ 0.7
LINC01840-201ENST00000421870 CFAP44Q96MT7 982 aa19.4■□□□□ 0.7
LINC01840-201ENST00000421870 ZNF652Q9Y2D9 606 aa19.4■□□□□ 0.7
LINC01840-201ENST00000421870 ERVV-1B6SEH8 477 aa19.39■□□□□ 0.69
LINC01840-201ENST00000421870 PDIA6Q15084 440 aa19.39■□□□□ 0.69
LINC01840-201ENST00000421870 PRR5LQ6MZQ0 368 aa19.39■□□□□ 0.69
LINC01840-201ENST00000421870 BRIP1Q9BX63 1249 aa19.39■□□□□ 0.69
LINC01840-201ENST00000421870 NUP98P52948 1817 aa19.39■□□□□ 0.69
LINC01840-201ENST00000421870 ANKRD31Q8N7Z5 1873 aa19.39■□□□□ 0.69
LINC01840-201ENST00000421870 ZNF853P0CG23 659 aa19.38■□□□□ 0.69
LINC01840-201ENST00000421870 HLFQ16534 295 aa19.38■□□□□ 0.69
LINC01840-201ENST00000421870 LRP10Q7Z4F1 713 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms