RNA–Protein interactions for RNA: ENST00000421757.5

FNDC3B-204, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best) BASIC

Gene FNDC3B, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-204ENST00000421757 MIS18AQ9NYP9 233 aa28.2■■■□□ 2.1
FNDC3B-204ENST00000421757 COL24A1Q17RW2 1714 aa28.2■■■□□ 2.1
FNDC3B-204ENST00000421757 LMOD3Q0VAK6 560 aa28.19■■■□□ 2.1
FNDC3B-204ENST00000421757 ZBTB1Q9Y2K1 713 aa28.19■■■□□ 2.1
FNDC3B-204ENST00000421757 PNISRQ8TF01 805 aaKnown RBP28.18■■■□□ 2.1
FNDC3B-204ENST00000421757 DCAF8L1A6NGE4 600 aa28.17■■■□□ 2.1
FNDC3B-204ENST00000421757 CANXP27824 592 aaKnown RBP28.17■■■□□ 2.1
FNDC3B-204ENST00000421757 CCDC184Q52MB2 194 aa28.17■■■□□ 2.1
FNDC3B-204ENST00000421757 SOS1Q07889 1333 aaPredicted RBP28.16■■■□□ 2.1
FNDC3B-204ENST00000421757 NLGN1Q8N2Q7 840 aa28.15■■■□□ 2.1
FNDC3B-204ENST00000421757 SNRPA1P09661 255 aaKnown RBP28.14■■■□□ 2.1
FNDC3B-204ENST00000421757 GYS1P13807 737 aa28.14■■■□□ 2.1
FNDC3B-204ENST00000421757 SRP68Q9UHB9 627 aaKnown RBP28.14■■■□□ 2.1
FNDC3B-204ENST00000421757 ZPR1O75312 459 aa28.13■■■□□ 2.09
FNDC3B-204ENST00000421757 MRS2Q9HD23 443 aa28.13■■■□□ 2.09
FNDC3B-204ENST00000421757 COL15A1P39059 1388 aa28.12■■■□□ 2.09
FNDC3B-204ENST00000421757 MMP10P09238 476 aa28.12■■■□□ 2.09
FNDC3B-204ENST00000421757 ZNF330Q9Y3S2 320 aaPredicted RBP28.12■■■□□ 2.09
FNDC3B-204ENST00000421757 USP42Q9H9J4 1324 aaKnown RBP28.12■■■□□ 2.09
FNDC3B-204ENST00000421757 PRAMEF22A3QJZ6 481 aa28.11■■■□□ 2.09
FNDC3B-204ENST00000421757 USP16Q9Y5T5 823 aa28.11■■■□□ 2.09
FNDC3B-204ENST00000421757 C4AP0C0L4 1744 aa28.11■■■□□ 2.09
FNDC3B-204ENST00000421757 A1BGP04217 495 aa28.1■■■□□ 2.09
FNDC3B-204ENST00000421757 NPM2Q86SE8 214 aaKnown RBP28.1■■■□□ 2.09
FNDC3B-204ENST00000421757 TSPYL4Q9UJ04 414 aa28.1■■■□□ 2.09
FNDC3B-204ENST00000421757 USPL1Q5W0Q7 1092 aa28.09■■■□□ 2.09
FNDC3B-204ENST00000421757 APAF1O14727 1248 aa28.07■■■□□ 2.08
FNDC3B-204ENST00000421757 EIF5P55010 431 aaKnown RBP28.07■■■□□ 2.08
FNDC3B-204ENST00000421757 FKBP8Q14318 412 aa28.07■■■□□ 2.08
FNDC3B-204ENST00000421757 NLGN2Q8NFZ4 835 aa28.07■■■□□ 2.08
FNDC3B-204ENST00000421757 TRIM35Q9UPQ4 493 aa28.07■■■□□ 2.08
FNDC3B-204ENST00000421757 A0A087WZG4 1122 aa28.06■■■□□ 2.08
FNDC3B-204ENST00000421757 EIF4A1P60842 406 aaKnown RBP28.06■■■□□ 2.08
FNDC3B-204ENST00000421757 NARFQ9UHQ1 456 aa28.06■■■□□ 2.08
FNDC3B-204ENST00000421757 CD2APQ9Y5K6 639 aa28.06■■■□□ 2.08
FNDC3B-204ENST00000421757 PARP3Q9Y6F1 533 aa28.06■■■□□ 2.08
FNDC3B-204ENST00000421757 IL6STP40189 918 aaPredicted RBP28.05■■■□□ 2.08
FNDC3B-204ENST00000421757 LAS1LQ9Y4W2 734 aaKnown RBP28.05■■■□□ 2.08
FNDC3B-204ENST00000421757 KDM3BQ7LBC6 1761 aa28.04■■■□□ 2.08
FNDC3B-204ENST00000421757 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
FNDC3B-204ENST00000421757 BABAM1Q9NWV8 329 aa28.03■■■□□ 2.08
FNDC3B-204ENST00000421757 GIGYF1O75420 1035 aaPredicted RBP28.02■■■□□ 2.08
FNDC3B-204ENST00000421757 PELP1Q8IZL8 1130 aaKnown RBP28.02■■■□□ 2.08
FNDC3B-204ENST00000421757 TBC1D2BQ9UPU7 963 aa28.01■■■□□ 2.07
FNDC3B-204ENST00000421757 GPR162Q16538 588 aa27.99■■■□□ 2.07
FNDC3B-204ENST00000421757 DZIP3Q86Y13 1208 aaKnown RBP27.97■■■□□ 2.07
FNDC3B-204ENST00000421757 BCL2L12Q9HB09 334 aa27.97■■■□□ 2.07
FNDC3B-204ENST00000421757 SENP3-EIF4A1A0A087X0R7 540 aa27.96■■■□□ 2.07
FNDC3B-204ENST00000421757 TM4SF1P30408 202 aa27.96■■■□□ 2.07
FNDC3B-204ENST00000421757 DDR1Q08345 913 aa27.96■■■□□ 2.07
FNDC3B-204ENST00000421757 NBPF26B4DH59 902 aa27.95■■■□□ 2.06
FNDC3B-204ENST00000421757 CHL1O00533 1208 aa27.95■■■□□ 2.06
FNDC3B-204ENST00000421757 NFIXQ14938 502 aa27.95■■■□□ 2.06
FNDC3B-204ENST00000421757 NBPF10Q6P3W6 841 aaKnown RBP27.95■■■□□ 2.06
FNDC3B-204ENST00000421757 BICDL1Q6ZP65 573 aa27.95■■■□□ 2.06
FNDC3B-204ENST00000421757 NBPF15Q8N660 670 aa27.95■■■□□ 2.06
FNDC3B-204ENST00000421757 POLRMTO00411 1230 aaKnown RBP27.94■■■□□ 2.06
FNDC3B-204ENST00000421757 CALD1Q05682 793 aaKnown RBP27.94■■■□□ 2.06
FNDC3B-204ENST00000421757 LAMB4A4D0S4 1761 aa27.94■■■□□ 2.06
FNDC3B-204ENST00000421757 CFAP44Q96MT7 982 aa27.93■■■□□ 2.06
FNDC3B-204ENST00000421757 CAMTA2O94983 1202 aa27.92■■■□□ 2.06
FNDC3B-204ENST00000421757 EIF2S2P20042 333 aaKnown RBP27.92■■■□□ 2.06
FNDC3B-204ENST00000421757 FAM9BQ8IZU0 186 aa27.92■■■□□ 2.06
FNDC3B-204ENST00000421757 NGEFQ8N5V2 710 aa27.92■■■□□ 2.06
FNDC3B-204ENST00000421757 MYL6BP14649 208 aa27.91■■■□□ 2.06
FNDC3B-204ENST00000421757 C10orf71Q711Q0 1435 aa27.91■■■□□ 2.06
FNDC3B-204ENST00000421757 TBC1D9BQ66K14 1250 aa27.9■■■□□ 2.06
FNDC3B-204ENST00000421757 WWC3Q9ULE0 1092 aa27.9■■■□□ 2.06
FNDC3B-204ENST00000421757 SERPINB2P05120 415 aa27.89■■■□□ 2.06
FNDC3B-204ENST00000421757 TGFB2P61812 414 aa27.89■■■□□ 2.06
FNDC3B-204ENST00000421757 SCN7AQ01118 1682 aa27.88■■■□□ 2.05
FNDC3B-204ENST00000421757 GNAI1P63096 354 aa27.88■■■□□ 2.05
FNDC3B-204ENST00000421757 KRT24Q2M2I5 525 aa27.88■■■□□ 2.05
FNDC3B-204ENST00000421757 IFT57Q9NWB7 429 aa27.88■■■□□ 2.05
FNDC3B-204ENST00000421757 ZNF652Q9Y2D9 606 aa27.88■■■□□ 2.05
FNDC3B-204ENST00000421757 NECTIN2Q92692 538 aa27.87■■■□□ 2.05
FNDC3B-204ENST00000421757 MBIPQ9NS73 344 aa27.87■■■□□ 2.05
FNDC3B-204ENST00000421757 A0A0G2JLW4 131 aa27.86■■■□□ 2.05
FNDC3B-204ENST00000421757 YBX3P16989 372 aaKnown RBP eCLIP27.86■■■□□ 2.05
FNDC3B-204ENST00000421757 SETDB2Q96T68 719 aa27.86■■■□□ 2.05
FNDC3B-204ENST00000421757 ERBB4Q15303 1308 aa27.86■■■□□ 2.05
FNDC3B-204ENST00000421757 SALL2Q9Y467 1007 aaPredicted RBP27.85■■■□□ 2.05
FNDC3B-204ENST00000421757 PXDNLA1KZ92 1463 aa27.84■■■□□ 2.05
FNDC3B-204ENST00000421757 ZNF853P0CG23 659 aa27.84■■■□□ 2.05
FNDC3B-204ENST00000421757 CCDC27Q2M243 656 aa27.84■■■□□ 2.05
FNDC3B-204ENST00000421757 CLEC4GQ6UXB4 293 aa27.84■■■□□ 2.05
FNDC3B-204ENST00000421757 KIF6Q6ZMV9 814 aa27.84■■■□□ 2.05
FNDC3B-204ENST00000421757 CARMIL3Q8ND23 1372 aa27.84■■■□□ 2.05
FNDC3B-204ENST00000421757 KIF13BQ9NQT8 1826 aa27.83■■■□□ 2.05
FNDC3B-204ENST00000421757 NPHP1O15259 732 aa27.83■■■□□ 2.05
FNDC3B-204ENST00000421757 GRIN3BO60391 1043 aa27.83■■■□□ 2.05
FNDC3B-204ENST00000421757 DPEP1P16444 411 aa27.83■■■□□ 2.05
FNDC3B-204ENST00000421757 BCORQ6W2J9 1755 aa27.82■■■□□ 2.04
FNDC3B-204ENST00000421757 WWC1Q8IX03 1113 aa27.82■■■□□ 2.04
FNDC3B-204ENST00000421757 YY1P25490 414 aa27.81■■■□□ 2.04
FNDC3B-204ENST00000421757 TTLL7Q6ZT98 887 aa27.81■■■□□ 2.04
FNDC3B-204ENST00000421757 GOLGB1Q14789 3259 aaKnown RBP27.8■■■□□ 2.04
FNDC3B-204ENST00000421757 ANXA1P04083 346 aa27.8■■■□□ 2.04
FNDC3B-204ENST00000421757 HDGFL1Q5TGJ6 251 aa27.8■■■□□ 2.04
FNDC3B-204ENST00000421757 DUSP27Q5VZP5 1158 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms