RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 HOXB7P09629 217 aa20.27■□□□□ 0.84
DDX55-203ENST00000421670 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
DDX55-203ENST00000421670 LINC00116Q8NCU8 138 aa20.27■□□□□ 0.84
DDX55-203ENST00000421670 UBR3Q6ZT12 1888 aa20.27■□□□□ 0.84
DDX55-203ENST00000421670 VAMP4O75379 141 aa20.26■□□□□ 0.83
DDX55-203ENST00000421670 SLC27A3Q5K4L6 730 aa20.26■□□□□ 0.83
DDX55-203ENST00000421670 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
DDX55-203ENST00000421670 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
DDX55-203ENST00000421670 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
DDX55-203ENST00000421670 SOS1Q07889 1333 aaPredicted RBP20.25■□□□□ 0.83
DDX55-203ENST00000421670 PIP4K2AP48426 406 aaPredicted RBP20.24■□□□□ 0.83
DDX55-203ENST00000421670 TEX13AQ9BXU3 409 aaPredicted RBP20.24■□□□□ 0.83
DDX55-203ENST00000421670 STARD3NLO95772 234 aa20.23■□□□□ 0.83
DDX55-203ENST00000421670 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
DDX55-203ENST00000421670 A1BGP04217 495 aa20.22■□□□□ 0.83
DDX55-203ENST00000421670 CRKLP46109 303 aaKnown RBP20.22■□□□□ 0.83
DDX55-203ENST00000421670 CHPF2Q9P2E5 772 aa20.22■□□□□ 0.83
DDX55-203ENST00000421670 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
DDX55-203ENST00000421670 ZBTB1Q9Y2K1 713 aa20.21■□□□□ 0.83
DDX55-203ENST00000421670 ANXA1P04083 346 aa20.21■□□□□ 0.83
DDX55-203ENST00000421670 CCDC30Q5VVM6 783 aa20.21■□□□□ 0.83
DDX55-203ENST00000421670 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
DDX55-203ENST00000421670 CCDC87Q9NVE4 849 aa20.21■□□□□ 0.83
DDX55-203ENST00000421670 CNTNAP4Q9C0A0 1308 aa20.2■□□□□ 0.82
DDX55-203ENST00000421670 PROSER3Q2NL68 480 aa20.2■□□□□ 0.82
DDX55-203ENST00000421670 INTS5Q6P9B9 1019 aaKnown RBP20.2■□□□□ 0.82
DDX55-203ENST00000421670 NBPF26B4DH59 902 aa20.19■□□□□ 0.82
DDX55-203ENST00000421670 MYL6BP14649 208 aa20.19■□□□□ 0.82
DDX55-203ENST00000421670 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
DDX55-203ENST00000421670 NBPF14Q5TI25 921 aa20.19■□□□□ 0.82
DDX55-203ENST00000421670 NBPF10Q6P3W6 841 aaKnown RBP20.19■□□□□ 0.82
DDX55-203ENST00000421670 NBPF15Q8N660 670 aa20.19■□□□□ 0.82
DDX55-203ENST00000421670 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
DDX55-203ENST00000421670 RARSP54136 660 aaKnown RBP20.18■□□□□ 0.82
DDX55-203ENST00000421670 PDIA6Q15084 440 aa20.18■□□□□ 0.82
DDX55-203ENST00000421670 SSH1Q8WYL5 1049 aa20.18■□□□□ 0.82
DDX55-203ENST00000421670 ERBB4Q15303 1308 aa20.18■□□□□ 0.82
DDX55-203ENST00000421670 GNPATO15228 680 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 AK7Q96M32 723 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 STK31Q9BXU1 1019 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 DBF4Q9UBU7 674 aaPredicted RBP20.17■□□□□ 0.82
DDX55-203ENST00000421670 ZNF330Q9Y3S2 320 aaPredicted RBP20.17■□□□□ 0.82
DDX55-203ENST00000421670 BCORQ6W2J9 1755 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 ARFGEF2Q9Y6D5 1785 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 SMIM5Q71RC9 77 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 ZNF428Q96B54 188 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 ANO8Q9HCE9 1232 aaPredicted RBP20.17■□□□□ 0.82
DDX55-203ENST00000421670 DDX21Q9NR30 783 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDX55-203ENST00000421670 SMC4Q9NTJ3 1288 aa20.17■□□□□ 0.82
DDX55-203ENST00000421670 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
DDX55-203ENST00000421670 AMIGO3Q86WK7 504 aa20.16■□□□□ 0.82
DDX55-203ENST00000421670 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
DDX55-203ENST00000421670 SCN7AQ01118 1682 aa20.15■□□□□ 0.82
DDX55-203ENST00000421670 BCAR3O75815 825 aa20.15■□□□□ 0.82
DDX55-203ENST00000421670 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
DDX55-203ENST00000421670 ALDH1L2Q3SY69 923 aa20.15■□□□□ 0.82
DDX55-203ENST00000421670 LRP10Q7Z4F1 713 aa20.15■□□□□ 0.82
DDX55-203ENST00000421670 CHMP4AQ9BY43 222 aa20.15■□□□□ 0.82
DDX55-203ENST00000421670 AKT1S1Q96B36 256 aa20.14■□□□□ 0.81
DDX55-203ENST00000421670 PHAXQ9H814 394 aaKnown RBP20.14■□□□□ 0.81
DDX55-203ENST00000421670 COL15A1P39059 1388 aa20.14■□□□□ 0.81
DDX55-203ENST00000421670 G2E3Q7L622 706 aa20.13■□□□□ 0.81
DDX55-203ENST00000421670 MRPL50Q8N5N7 158 aaKnown RBP20.13■□□□□ 0.81
DDX55-203ENST00000421670 PHF14O94880 888 aa20.12■□□□□ 0.81
DDX55-203ENST00000421670 IL6STP40189 918 aaPredicted RBP20.12■□□□□ 0.81
DDX55-203ENST00000421670 HYPKQ9NX55 129 aa20.12■□□□□ 0.81
DDX55-203ENST00000421670 NUP98P52948 1817 aa20.12■□□□□ 0.81
DDX55-203ENST00000421670 RPS6KA4O75676 772 aa20.12■□□□□ 0.81
DDX55-203ENST00000421670 EIF5P55010 431 aaKnown RBP20.12■□□□□ 0.81
DDX55-203ENST00000421670 RTCBQ9Y3I0 505 aaKnown RBP20.12■□□□□ 0.81
DDX55-203ENST00000421670 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
DDX55-203ENST00000421670 AIMP1Q12904 312 aaKnown RBP20.11■□□□□ 0.81
DDX55-203ENST00000421670 TFCP2L1Q9NZI6 479 aa20.11■□□□□ 0.81
DDX55-203ENST00000421670 ANKRD36CQ5JPF3 1778 aa20.11■□□□□ 0.81
DDX55-203ENST00000421670 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
DDX55-203ENST00000421670 STK32BQ9NY57 414 aa20.1■□□□□ 0.81
DDX55-203ENST00000421670 FLIIQ13045 1269 aa20.09■□□□□ 0.81
DDX55-203ENST00000421670 SLC15A2Q16348 729 aa20.09■□□□□ 0.81
DDX55-203ENST00000421670 TTLL7Q6ZT98 887 aa20.09■□□□□ 0.81
DDX55-203ENST00000421670 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
DDX55-203ENST00000421670 ARXQ96QS3 562 aa20.09■□□□□ 0.81
DDX55-203ENST00000421670 N4BP2Q86UW6 1770 aaPredicted RBP20.09■□□□□ 0.81
DDX55-203ENST00000421670 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.08■□□□□ 0.81
DDX55-203ENST00000421670 CENPBP07199 599 aaPredicted RBP20.08■□□□□ 0.81
DDX55-203ENST00000421670 AFDNP55196 1824 aaKnown RBP20.08■□□□□ 0.81
DDX55-203ENST00000421670 SSFA2P28290 1259 aa20.08■□□□□ 0.8
DDX55-203ENST00000421670 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.8
DDX55-203ENST00000421670 KIF16BQ96L93 1317 aa20.07■□□□□ 0.8
DDX55-203ENST00000421670 FKBP5Q13451 457 aaPredicted RBP20.07■□□□□ 0.8
DDX55-203ENST00000421670 DZIP3Q86Y13 1208 aaKnown RBP20.07■□□□□ 0.8
DDX55-203ENST00000421670 FRAT1Q92837 279 aaPredicted RBP20.07■□□□□ 0.8
DDX55-203ENST00000421670 NOB1Q9ULX3 412 aaKnown RBP20.07■□□□□ 0.8
DDX55-203ENST00000421670 TBC1D2BQ9UPU7 963 aa20.07■□□□□ 0.8
DDX55-203ENST00000421670 PNPLA7Q6ZV29 1317 aa20.07■□□□□ 0.8
DDX55-203ENST00000421670 CASZ1Q86V15 1759 aa20.06■□□□□ 0.8
DDX55-203ENST00000421670 BRPF1P55201 1214 aaPredicted RBP20.06■□□□□ 0.8
DDX55-203ENST00000421670 TRAPPC3LQ5T215 181 aa20.06■□□□□ 0.8
DDX55-203ENST00000421670 ARHGEF1Q92888 912 aaKnown RBP20.06■□□□□ 0.8
DDX55-203ENST00000421670 ZBTB3Q9H5J0 574 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms