RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 POLR3GLQ9BT43 218 aa10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 USP35Q9P2H5 1018 aa10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 A0A1W2PP64 1363 aa10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 AATKQ6ZMQ8 1374 aa10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 CD163L1Q9NR16 1453 aa10.48□□□□□ -0.73
AC012560.1-202ENST00000421324 LARP1Q6PKG0 1096 aaKnown RBP10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 KRT27Q7Z3Y8 459 aa10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 GPIHBP1Q8IV16 184 aa10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 RBM46Q8TBY0 533 aaKnown RBP10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 SPATA31A1Q5TZJ5 1347 aa10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 USP31Q70CQ4 1352 aa10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 PHRF1Q9P1Y6 1649 aaKnown RBP10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 CRYBG1Q9Y4K1 1723 aa10.47□□□□□ -0.73
AC012560.1-202ENST00000421324 IFFO2Q5TF58 517 aa10.46□□□□□ -0.73
AC012560.1-202ENST00000421324 CCDC125Q86Z20 511 aa10.46□□□□□ -0.73
AC012560.1-202ENST00000421324 TCP11L2Q8N4U5 519 aa10.46□□□□□ -0.73
AC012560.1-202ENST00000421324 COG3Q96JB2 828 aa10.46□□□□□ -0.73
AC012560.1-202ENST00000421324 ANKRD36BQ8N2N9 1353 aa10.46□□□□□ -0.74
AC012560.1-202ENST00000421324 GLI3P10071 1580 aa10.46□□□□□ -0.74
AC012560.1-202ENST00000421324 AKAP12Q02952 1782 aa10.46□□□□□ -0.74
AC012560.1-202ENST00000421324 CAMTA1Q9Y6Y1 1673 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 NRKQ7Z2Y5 1582 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 SLIT3O75094 1523 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 CSB-PGBD3P0DP91 1061 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 PPP4CP60510 307 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 TOM1L2Q6ZVM7 507 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 PXYLP1Q8TE99 480 aa10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 THRAP3Q9Y2W1 955 aaKnown RBP10.45□□□□□ -0.74
AC012560.1-202ENST00000421324 PIK3C2AO00443 1686 aa10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 RCCD1A6NED2 376 aa10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 DNAJB2P25686 324 aa10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 PDE3BQ13370 1112 aa10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 SF3B2Q13435 895 aaKnown RBP10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 TMEM134Q9H6X4 195 aa10.44□□□□□ -0.74
AC012560.1-202ENST00000421324 FYB1O15117 783 aa10.43□□□□□ -0.74
AC012560.1-202ENST00000421324 ITGBL1O95965 494 aaPredicted RBP10.43□□□□□ -0.74
AC012560.1-202ENST00000421324 OATP04181 439 aa10.43□□□□□ -0.74
AC012560.1-202ENST00000421324 MON2Q7Z3U7 1717 aa10.43□□□□□ -0.74
AC012560.1-202ENST00000421324 CRB1P82279 1406 aa10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 METTL3Q86U44 580 aaKnown RBP10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 GGNBP2Q9H3C7 697 aa10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 COL5A2P05997 1499 aaPredicted RBP10.42□□□□□ -0.74
AC012560.1-202ENST00000421324 AMPHP49418 695 aa10.41□□□□□ -0.74
AC012560.1-202ENST00000421324 SLF2Q8IX21 1173 aa10.41□□□□□ -0.74
AC012560.1-202ENST00000421324 CDCA7Q9BWT1 371 aaPredicted RBP10.41□□□□□ -0.74
AC012560.1-202ENST00000421324 CARD10Q9BWT7 1032 aa10.41□□□□□ -0.74
AC012560.1-202ENST00000421324 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.4□□□□□ -0.74
AC012560.1-202ENST00000421324 FAM182BQ5T319 152 aa10.4□□□□□ -0.74
AC012560.1-202ENST00000421324 FAM196AQ6ZSG2 479 aa10.4□□□□□ -0.74
AC012560.1-202ENST00000421324 IP6K1Q92551 441 aa10.4□□□□□ -0.74
AC012560.1-202ENST00000421324 NLRP2Q9NX02 1062 aa10.4□□□□□ -0.74
AC012560.1-202ENST00000421324 LMO7Q8WWI1 1683 aa10.4□□□□□ -0.74
AC012560.1-202ENST00000421324 CGNL1Q0VF96 1302 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 NFAT5O94916 1531 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 FBLN1P23142 703 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 ANKRD24Q8TF21 1146 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 PANK3Q9H999 370 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 OVOS2A0A0J9YW53 1432 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 BLMP54132 1417 aaPredicted RBP10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 OVOS2Q6IE36 1432 aa10.39□□□□□ -0.75
AC012560.1-202ENST00000421324 MAP3K19Q56UN5 1328 aa10.38□□□□□ -0.75
AC012560.1-202ENST00000421324 C11orf95C9JLR9 678 aaPredicted RBP10.38□□□□□ -0.75
AC012560.1-202ENST00000421324 EXOC5O00471 708 aa10.38□□□□□ -0.75
AC012560.1-202ENST00000421324 APLP1P51693 650 aa10.38□□□□□ -0.75
AC012560.1-202ENST00000421324 DDB1Q16531 1140 aa10.38□□□□□ -0.75
AC012560.1-202ENST00000421324 LTV1Q96GA3 475 aaPredicted RBP10.38□□□□□ -0.75
AC012560.1-202ENST00000421324 RNF40O75150 1001 aa10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 RRS1Q15050 365 aaKnown RBP10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 PHOX2BQ99453 314 aa10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 NSD3Q9BZ95 1437 aa10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 BRWD3Q6RI45 1802 aa10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 COL18A1P39060 1754 aa10.37□□□□□ -0.75
AC012560.1-202ENST00000421324 HOXC9P31274 260 aa10.36□□□□□ -0.75
AC012560.1-202ENST00000421324 BAG6P46379 1132 aa10.36□□□□□ -0.75
AC012560.1-202ENST00000421324 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
AC012560.1-202ENST00000421324 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
AC012560.1-202ENST00000421324 KNSTRNQ9Y448 316 aa10.36□□□□□ -0.75
AC012560.1-202ENST00000421324 ABCC6O95255 1503 aa10.36□□□□□ -0.75
AC012560.1-202ENST00000421324 USP54Q70EL1 1684 aa10.35□□□□□ -0.75
AC012560.1-202ENST00000421324 TRIM37O94972 964 aa10.35□□□□□ -0.75
AC012560.1-202ENST00000421324 DEFB132Q7Z7B7 95 aa10.35□□□□□ -0.75
AC012560.1-202ENST00000421324 THSD7AQ9UPZ6 1657 aa10.34□□□□□ -0.75
AC012560.1-202ENST00000421324 PPM1GO15355 546 aaPredicted RBP10.34□□□□□ -0.75
AC012560.1-202ENST00000421324 IL2RBP14784 551 aa10.34□□□□□ -0.75
AC012560.1-202ENST00000421324 MAP2K5Q13163 448 aa10.34□□□□□ -0.75
AC012560.1-202ENST00000421324 KIF7Q2M1P5 1343 aa10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 APBA3O96018 575 aa10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 SLC10A3P09131 477 aa10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 TNNT2P45379 298 aaPredicted RBP10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 KCNC4Q03721 635 aa10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 RTL1A6NKG5 1358 aa10.33□□□□□ -0.76
AC012560.1-202ENST00000421324 RGPD5Q99666 1765 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms