RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 KCNQ3O43525 872 aa11.31□□□□□ -0.6
GACAT1-201ENST00000419650 MMP10P09238 476 aa11.31□□□□□ -0.6
GACAT1-201ENST00000419650 GYS1P13807 737 aa11.31□□□□□ -0.6
GACAT1-201ENST00000419650 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
GACAT1-201ENST00000419650 VSIG10Q8N0Z9 540 aa11.31□□□□□ -0.6
GACAT1-201ENST00000419650 PLEKHF1Q96S99 279 aa11.31□□□□□ -0.6
GACAT1-201ENST00000419650 SRP68Q9UHB9 627 aaKnown RBP11.31□□□□□ -0.6
GACAT1-201ENST00000419650 SOS1Q07889 1333 aaPredicted RBP11.31□□□□□ -0.6
GACAT1-201ENST00000419650 USP42Q9H9J4 1324 aaKnown RBP11.31□□□□□ -0.6
GACAT1-201ENST00000419650 KDM3BQ7LBC6 1761 aa11.31□□□□□ -0.6
GACAT1-201ENST00000419650 COL15A1P39059 1388 aa11.3□□□□□ -0.6
GACAT1-201ENST00000419650 KIAA1551Q9HCM1 1747 aa11.3□□□□□ -0.6
GACAT1-201ENST00000419650 GPR162Q16538 588 aa11.3□□□□□ -0.6
GACAT1-201ENST00000419650 ZBTB1Q9Y2K1 713 aa11.3□□□□□ -0.6
GACAT1-201ENST00000419650 CD2APQ9Y5K6 639 aa11.3□□□□□ -0.6
GACAT1-201ENST00000419650 N4BP2Q86UW6 1770 aaPredicted RBP11.3□□□□□ -0.6
GACAT1-201ENST00000419650 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
GACAT1-201ENST00000419650 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
GACAT1-201ENST00000419650 HTATSF1O43719 755 aaKnown RBP11.29□□□□□ -0.6
GACAT1-201ENST00000419650 NFE2L2Q16236 605 aa11.29□□□□□ -0.6
GACAT1-201ENST00000419650 NLGN1Q8N2Q7 840 aa11.29□□□□□ -0.6
GACAT1-201ENST00000419650 FMNL2Q96PY5 1086 aa11.29□□□□□ -0.6
GACAT1-201ENST00000419650 SCN7AQ01118 1682 aa11.29□□□□□ -0.6
GACAT1-201ENST00000419650 YY1P25490 414 aa11.28□□□□□ -0.6
GACAT1-201ENST00000419650 CANXP27824 592 aaKnown RBP11.28□□□□□ -0.6
GACAT1-201ENST00000419650 PNNQ9H307 717 aaKnown RBP11.28□□□□□ -0.6
GACAT1-201ENST00000419650 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
GACAT1-201ENST00000419650 AFDNP55196 1824 aaKnown RBP11.28□□□□□ -0.6
GACAT1-201ENST00000419650 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
GACAT1-201ENST00000419650 ZPR1O75312 459 aa11.27□□□□□ -0.61
GACAT1-201ENST00000419650 STARD3NLO95772 234 aa11.27□□□□□ -0.61
GACAT1-201ENST00000419650 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
GACAT1-201ENST00000419650 FKBP8Q14318 412 aa11.27□□□□□ -0.61
GACAT1-201ENST00000419650 USPL1Q5W0Q7 1092 aa11.27□□□□□ -0.61
GACAT1-201ENST00000419650 THUMPD2Q9BTF0 503 aaKnown RBP11.27□□□□□ -0.61
GACAT1-201ENST00000419650 PXDNLA1KZ92 1463 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 BRCA1P38398 1863 aaKnown RBP11.26□□□□□ -0.61
GACAT1-201ENST00000419650 PRAMEF22A3QJZ6 481 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 DDR1Q08345 913 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 TAF7Q15545 349 aaPredicted RBP11.26□□□□□ -0.61
GACAT1-201ENST00000419650 CCDC146Q8IYE0 955 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 TEX13AQ9BXU3 409 aaPredicted RBP11.26□□□□□ -0.61
GACAT1-201ENST00000419650 MIS18AQ9NYP9 233 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 NARFQ9UHQ1 456 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 WWC3Q9ULE0 1092 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 ZNF330Q9Y3S2 320 aaPredicted RBP11.26□□□□□ -0.61
GACAT1-201ENST00000419650 PARP3Q9Y6F1 533 aa11.26□□□□□ -0.61
GACAT1-201ENST00000419650 WDR43Q15061 677 aaKnown RBP eCLIP11.25□□□□□ -0.61
GACAT1-201ENST00000419650 NRXN2Q9P2S2 1712 aa11.24□□□□□ -0.61
GACAT1-201ENST00000419650 A1BGP04217 495 aa11.24□□□□□ -0.61
GACAT1-201ENST00000419650 SNRPA1P09661 255 aaKnown RBP11.24□□□□□ -0.61
GACAT1-201ENST00000419650 PIP4K2AP48426 406 aaPredicted RBP11.24□□□□□ -0.61
GACAT1-201ENST00000419650 EIF5P55010 431 aaKnown RBP11.24□□□□□ -0.61
GACAT1-201ENST00000419650 RIPK4P57078 832 aa11.24□□□□□ -0.61
GACAT1-201ENST00000419650 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
GACAT1-201ENST00000419650 USP16Q9Y5T5 823 aa11.24□□□□□ -0.61
GACAT1-201ENST00000419650 A0A087WZG4 1122 aa11.23□□□□□ -0.61
GACAT1-201ENST00000419650 ZNF316A6NFI3 1004 aaPredicted RBP11.23□□□□□ -0.61
GACAT1-201ENST00000419650 POLRMTO00411 1230 aaKnown RBP11.23□□□□□ -0.61
GACAT1-201ENST00000419650 IL6STP40189 918 aaPredicted RBP11.23□□□□□ -0.61
GACAT1-201ENST00000419650 TMPOP42166 694 aaKnown RBP11.23□□□□□ -0.61
GACAT1-201ENST00000419650 NFIXQ14938 502 aa11.23□□□□□ -0.61
GACAT1-201ENST00000419650 BCL2L12Q9HB09 334 aa11.23□□□□□ -0.61
GACAT1-201ENST00000419650 ADAMTS8Q9UP79 889 aa11.23□□□□□ -0.61
GACAT1-201ENST00000419650 A0A0G2JLW4 131 aa11.22□□□□□ -0.61
GACAT1-201ENST00000419650 TM4SF1P30408 202 aa11.22□□□□□ -0.61
GACAT1-201ENST00000419650 NEUROD2Q15784 382 aa11.22□□□□□ -0.61
GACAT1-201ENST00000419650 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
GACAT1-201ENST00000419650 RUNDC1Q96C34 613 aa11.22□□□□□ -0.61
GACAT1-201ENST00000419650 TBC1D2BQ9UPU7 963 aa11.22□□□□□ -0.61
GACAT1-201ENST00000419650 GRIN3BO60391 1043 aa11.21□□□□□ -0.61
GACAT1-201ENST00000419650 DPEP1P16444 411 aa11.21□□□□□ -0.61
GACAT1-201ENST00000419650 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
GACAT1-201ENST00000419650 BICDL1Q6ZP65 573 aa11.21□□□□□ -0.61
GACAT1-201ENST00000419650 NPM2Q86SE8 214 aaKnown RBP11.21□□□□□ -0.61
GACAT1-201ENST00000419650 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.62
GACAT1-201ENST00000419650 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.62
GACAT1-201ENST00000419650 DLEC1Q9Y238 1755 aa11.21□□□□□ -0.62
GACAT1-201ENST00000419650 NBPF26B4DH59 902 aa11.2□□□□□ -0.62
GACAT1-201ENST00000419650 EIF4A1P60842 406 aaKnown RBP11.2□□□□□ -0.62
GACAT1-201ENST00000419650 TGFB2P61812 414 aa11.2□□□□□ -0.62
GACAT1-201ENST00000419650 NBPF10Q6P3W6 841 aaKnown RBP11.2□□□□□ -0.62
GACAT1-201ENST00000419650 NBPF15Q8N660 670 aa11.2□□□□□ -0.62
GACAT1-201ENST00000419650 GIGYF1O75420 1035 aaPredicted RBP11.19□□□□□ -0.62
GACAT1-201ENST00000419650 CAMTA2O94983 1202 aa11.19□□□□□ -0.62
GACAT1-201ENST00000419650 SERPINB2P05120 415 aa11.19□□□□□ -0.62
GACAT1-201ENST00000419650 CCDC184Q52MB2 194 aa11.19□□□□□ -0.62
GACAT1-201ENST00000419650 TBC1D9BQ66K14 1250 aa11.19□□□□□ -0.62
GACAT1-201ENST00000419650 DZIP3Q86Y13 1208 aaKnown RBP11.19□□□□□ -0.62
GACAT1-201ENST00000419650 TSPYL4Q9UJ04 414 aa11.19□□□□□ -0.62
GACAT1-201ENST00000419650 COL11A2P13942 1736 aaPredicted RBP11.18□□□□□ -0.62
GACAT1-201ENST00000419650 CARMIL3Q8ND23 1372 aa11.18□□□□□ -0.62
GACAT1-201ENST00000419650 CHRNA5P30532 468 aa11.18□□□□□ -0.62
GACAT1-201ENST00000419650 ZNF784Q8NCA9 323 aaPredicted RBP11.18□□□□□ -0.62
GACAT1-201ENST00000419650 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
GACAT1-201ENST00000419650 BCS1LQ9Y276 419 aa11.18□□□□□ -0.62
GACAT1-201ENST00000419650 NUP98P52948 1817 aa11.18□□□□□ -0.62
GACAT1-201ENST00000419650 KCNA3P22001 575 aa11.17□□□□□ -0.62
GACAT1-201ENST00000419650 CACNA1SQ13698 1873 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms