RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 TNS2Q63HR2 1409 aa16.56■□□□□ 0.24
SFTPA1-202ENST00000419470 DZIP1LQ8IYY4 767 aaKnown RBP16.56■□□□□ 0.24
SFTPA1-202ENST00000419470 CLUAP1Q96AJ1 413 aa16.56■□□□□ 0.24
SFTPA1-202ENST00000419470 ERVV-2B6SEH9 535 aa16.55■□□□□ 0.24
SFTPA1-202ENST00000419470 ARXQ96QS3 562 aa16.55■□□□□ 0.24
SFTPA1-202ENST00000419470 COG6Q9Y2V7 657 aa16.55■□□□□ 0.24
SFTPA1-202ENST00000419470 CABP4P57796 275 aa16.55■□□□□ 0.24
SFTPA1-202ENST00000419470 ZNF790Q6PG37 636 aa16.55■□□□□ 0.24
SFTPA1-202ENST00000419470 VPS72Q15906 364 aa16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 BARGINQ6ZT62 677 aa16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 ITGB4P16144 1822 aa16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 EXOC5O00471 708 aa16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 CCDC30Q5VVM6 783 aa16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
SFTPA1-202ENST00000419470 SEC24BO95487 1268 aa16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 SLC39A6Q13433 755 aa16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 UPF2Q9HAU5 1272 aaKnown RBP16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 KAT6BQ8WYB5 2073 aa16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 UBR2Q8IWV8 1755 aa16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 SLC4A2P04920 1241 aa16.53■□□□□ 0.24
SFTPA1-202ENST00000419470 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
SFTPA1-202ENST00000419470 MVPQ14764 893 aaKnown RBP16.52■□□□□ 0.24
SFTPA1-202ENST00000419470 GRPEL1Q9HAV7 217 aa16.52■□□□□ 0.24
SFTPA1-202ENST00000419470 C5P01031 1676 aa16.52■□□□□ 0.23
SFTPA1-202ENST00000419470 HDGFL1Q5TGJ6 251 aa16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 TBC1D2Q9BYX2 928 aa16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 USP21Q9UK80 565 aa16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 TRAK2O60296 914 aa16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
SFTPA1-202ENST00000419470 RGS12O14924 1447 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 ABCC4O15439 1325 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 PTPRCP08575 1304 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 ERBB4Q15303 1308 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 DDB1Q16531 1140 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 MEX3CQ5U5Q3 659 aaKnown RBP16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 API5Q9BZZ5 524 aaKnown RBP16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 GLI3P10071 1580 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 NECTIN2Q92692 538 aa16.5■□□□□ 0.23
SFTPA1-202ENST00000419470 TTC5Q8N0Z6 440 aa16.49■□□□□ 0.23
SFTPA1-202ENST00000419470 TRIM44Q96DX7 344 aaPredicted RBP16.49■□□□□ 0.23
SFTPA1-202ENST00000419470 ZNF496Q96IT1 587 aaPredicted RBP16.49■□□□□ 0.23
SFTPA1-202ENST00000419470 AAMPQ13685 434 aa16.49■□□□□ 0.23
SFTPA1-202ENST00000419470 G2E3Q7L622 706 aa16.49■□□□□ 0.23
SFTPA1-202ENST00000419470 EIF2S2P20042 333 aaKnown RBP16.48■□□□□ 0.23
SFTPA1-202ENST00000419470 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
SFTPA1-202ENST00000419470 AFF2P51816 1311 aa16.48■□□□□ 0.23
SFTPA1-202ENST00000419470 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 IGHDP01880 384 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 FAM98CQ17RN3 349 aaKnown RBP16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 ITPRIPQ8IWB1 547 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 DDX19BQ9UMR2 479 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 TMOD3Q9NYL9 352 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 LAMB4A4D0S4 1761 aa16.47■□□□□ 0.23
SFTPA1-202ENST00000419470 CHPF2Q9P2E5 772 aa16.46■□□□□ 0.23
SFTPA1-202ENST00000419470 THSD7AQ9UPZ6 1657 aa16.46■□□□□ 0.23
SFTPA1-202ENST00000419470 FLIIQ13045 1269 aa16.46■□□□□ 0.23
SFTPA1-202ENST00000419470 SNRPA1P09661 255 aaKnown RBP16.45■□□□□ 0.22
SFTPA1-202ENST00000419470 MARCH10Q8NA82 808 aaPredicted RBP16.45■□□□□ 0.22
SFTPA1-202ENST00000419470 BCL9O00512 1426 aa16.45■□□□□ 0.22
SFTPA1-202ENST00000419470 PIGBQ92521 554 aa16.45■□□□□ 0.22
SFTPA1-202ENST00000419470 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
SFTPA1-202ENST00000419470 N4BP2Q86UW6 1770 aaPredicted RBP16.44■□□□□ 0.22
SFTPA1-202ENST00000419470 ATRNO75882 1429 aa16.44■□□□□ 0.22
SFTPA1-202ENST00000419470 INTS3Q68E01 1043 aaKnown RBP16.44■□□□□ 0.22
SFTPA1-202ENST00000419470 PRDM4Q9UKN5 801 aa16.44■□□□□ 0.22
SFTPA1-202ENST00000419470 TERF1P54274 439 aa16.43■□□□□ 0.22
SFTPA1-202ENST00000419470 PHAXQ9H814 394 aaKnown RBP16.43■□□□□ 0.22
SFTPA1-202ENST00000419470 FKBP5Q13451 457 aaPredicted RBP16.42■□□□□ 0.22
SFTPA1-202ENST00000419470 GJD4Q96KN9 370 aaPredicted RBP16.42■□□□□ 0.22
SFTPA1-202ENST00000419470 ZBTB40Q9NUA8 1239 aa16.42■□□□□ 0.22
SFTPA1-202ENST00000419470 KIAA1211Q6ZU35 1233 aa16.42■□□□□ 0.22
SFTPA1-202ENST00000419470 MAP7D2Q96T17 732 aa16.42■□□□□ 0.22
SFTPA1-202ENST00000419470 USP16Q9Y5T5 823 aa16.42■□□□□ 0.22
SFTPA1-202ENST00000419470 F6X3S4 739 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 ANXA1P04083 346 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 PDIA6Q15084 440 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 DDX21Q9NR30 783 aaKnown RBP eCLIP16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 TRPC5Q9UL62 973 aaPredicted RBP16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 ASAP1Q9ULH1 1129 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 PRIM1P49642 420 aaKnown RBP16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 ATG3Q9NT62 314 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 PCDHB15Q9Y5E8 787 aa16.41■□□□□ 0.22
SFTPA1-202ENST00000419470 PTCD1O75127 700 aaKnown RBP16.4■□□□□ 0.22
SFTPA1-202ENST00000419470 HYPKQ9NX55 129 aa16.4■□□□□ 0.22
SFTPA1-202ENST00000419470 PXDNLA1KZ92 1463 aa16.4■□□□□ 0.22
SFTPA1-202ENST00000419470 CHMP4BQ9H444 224 aaKnown RBP16.39■□□□□ 0.22
SFTPA1-202ENST00000419470 ONECUT3O60422 494 aaPredicted RBP16.39■□□□□ 0.21
SFTPA1-202ENST00000419470 SYTL4Q96C24 671 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms