RNA–Protein interactions for RNA: ENST00000418386.2

LTA-213, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTA, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-213ENST00000418386 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
LTA-213ENST00000418386 BCL11BQ9C0K0 894 aaPredicted RBP17.25■□□□□ 0.35
LTA-213ENST00000418386 SLC4A2P04920 1241 aa17.24■□□□□ 0.35
LTA-213ENST00000418386 CANXP27824 592 aaKnown RBP17.24■□□□□ 0.35
LTA-213ENST00000418386 PDE3AQ14432 1141 aa17.24■□□□□ 0.35
LTA-213ENST00000418386 FRAT1Q92837 279 aaPredicted RBP17.24■□□□□ 0.35
LTA-213ENST00000418386 DBF4Q9UBU7 674 aaPredicted RBP17.24■□□□□ 0.35
LTA-213ENST00000418386 NOB1Q9ULX3 412 aaKnown RBP17.24■□□□□ 0.35
LTA-213ENST00000418386 PTPRCP08575 1304 aa17.24■□□□□ 0.35
LTA-213ENST00000418386 COL5A3P25940 1745 aaPredicted RBP17.23■□□□□ 0.35
LTA-213ENST00000418386 ATF7IPQ6VMQ6 1270 aa17.23■□□□□ 0.35
LTA-213ENST00000418386 PTF1AQ7RTS3 328 aa17.23■□□□□ 0.35
LTA-213ENST00000418386 NECTIN2Q92692 538 aa17.23■□□□□ 0.35
LTA-213ENST00000418386 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
LTA-213ENST00000418386 RBM42Q9BTD8 480 aaKnown RBP17.23■□□□□ 0.35
LTA-213ENST00000418386 CHPF2Q9P2E5 772 aa17.23■□□□□ 0.35
LTA-213ENST00000418386 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
LTA-213ENST00000418386 RREB1Q92766 1687 aa17.22■□□□□ 0.35
LTA-213ENST00000418386 LOC102724428A0A0B4J2F2 783 aa17.22■□□□□ 0.35
LTA-213ENST00000418386 MS4A1P11836 297 aa17.22■□□□□ 0.35
LTA-213ENST00000418386 SIK1P57059 783 aa17.22■□□□□ 0.35
LTA-213ENST00000418386 DDX21Q9NR30 783 aaKnown RBP eCLIP17.22■□□□□ 0.35
LTA-213ENST00000418386 TRIM27P14373 513 aa17.21■□□□□ 0.35
LTA-213ENST00000418386 DNAJC10Q8IXB1 793 aa17.21■□□□□ 0.35
LTA-213ENST00000418386 API5Q9BZZ5 524 aaKnown RBP17.21■□□□□ 0.35
LTA-213ENST00000418386 N4BP2Q86UW6 1770 aaPredicted RBP17.21■□□□□ 0.35
LTA-213ENST00000418386 TNS1Q9HBL0 1735 aaKnown RBP17.21■□□□□ 0.35
LTA-213ENST00000418386 FLIIQ13045 1269 aa17.21■□□□□ 0.34
LTA-213ENST00000418386 PDIA6Q15084 440 aa17.21■□□□□ 0.34
LTA-213ENST00000418386 G2E3Q7L622 706 aa17.21■□□□□ 0.34
LTA-213ENST00000418386 HYPKQ9NX55 129 aa17.21■□□□□ 0.34
LTA-213ENST00000418386 STARD3NLO95772 234 aa17.2■□□□□ 0.34
LTA-213ENST00000418386 PROSER3Q2NL68 480 aa17.2■□□□□ 0.34
LTA-213ENST00000418386 C20orf194Q5TEA3 1177 aa17.2■□□□□ 0.34
LTA-213ENST00000418386 ABCC4O15439 1325 aa17.19■□□□□ 0.34
LTA-213ENST00000418386 IRX6P78412 446 aaPredicted RBP17.19■□□□□ 0.34
LTA-213ENST00000418386 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
LTA-213ENST00000418386 DZIP1LQ8IYY4 767 aaKnown RBP17.19■□□□□ 0.34
LTA-213ENST00000418386 TNNQ9UQP3 1299 aa17.19■□□□□ 0.34
LTA-213ENST00000418386 RGPD3A6NKT7 1758 aaPredicted RBP17.19■□□□□ 0.34
LTA-213ENST00000418386 RGPD4Q7Z3J3 1758 aa17.19■□□□□ 0.34
LTA-213ENST00000418386 PXDNLA1KZ92 1463 aa17.19■□□□□ 0.34
LTA-213ENST00000418386 TAF1LQ8IZX4 1826 aa17.18■□□□□ 0.34
LTA-213ENST00000418386 ANXA1P04083 346 aa17.18■□□□□ 0.34
LTA-213ENST00000418386 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
LTA-213ENST00000418386 RLBP1P12271 317 aa17.18■□□□□ 0.34
LTA-213ENST00000418386 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
LTA-213ENST00000418386 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
LTA-213ENST00000418386 EP400Q96L91 3159 aa17.18■□□□□ 0.34
LTA-213ENST00000418386 TRIM37O94972 964 aa17.17■□□□□ 0.34
LTA-213ENST00000418386 ATP6V1AP38606 617 aa17.17■□□□□ 0.34
LTA-213ENST00000418386 ITPK1Q13572 414 aa17.17■□□□□ 0.34
LTA-213ENST00000418386 PANK1Q8TE04 598 aa17.17■□□□□ 0.34
LTA-213ENST00000418386 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
LTA-213ENST00000418386 MYH14Q7Z406 1995 aaKnown RBP17.17■□□□□ 0.34
LTA-213ENST00000418386 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
LTA-213ENST00000418386 FKBP5Q13451 457 aaPredicted RBP17.16■□□□□ 0.34
LTA-213ENST00000418386 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
LTA-213ENST00000418386 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
LTA-213ENST00000418386 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
LTA-213ENST00000418386 A1BGP04217 495 aa17.15■□□□□ 0.34
LTA-213ENST00000418386 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
LTA-213ENST00000418386 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
LTA-213ENST00000418386 MYL6BP14649 208 aa17.14■□□□□ 0.33
LTA-213ENST00000418386 NUP188Q5SRE5 1749 aa17.14■□□□□ 0.33
LTA-213ENST00000418386 ARFGEF2Q9Y6D5 1785 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 MVPQ14764 893 aaKnown RBP17.13■□□□□ 0.33
LTA-213ENST00000418386 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
LTA-213ENST00000418386 CNTNAP4Q9C0A0 1308 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 ADCY9O60503 1353 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
LTA-213ENST00000418386 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
LTA-213ENST00000418386 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 XAGE3Q8WTP9 111 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 PPP4R2Q9NY27 417 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
LTA-213ENST00000418386 PLSCR1O15162 318 aa17.12■□□□□ 0.33
LTA-213ENST00000418386 CRKLP46109 303 aaKnown RBP17.12■□□□□ 0.33
LTA-213ENST00000418386 SLC27A3Q5K4L6 730 aa17.12■□□□□ 0.33
LTA-213ENST00000418386 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
LTA-213ENST00000418386 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
LTA-213ENST00000418386 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
LTA-213ENST00000418386 RBM19Q9Y4C8 960 aaKnown RBP17.12■□□□□ 0.33
LTA-213ENST00000418386 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
LTA-213ENST00000418386 C4BP0C0L5 1744 aa17.12■□□□□ 0.33
LTA-213ENST00000418386 F6X3S4 739 aa17.11■□□□□ 0.33
LTA-213ENST00000418386 IL6STP40189 918 aaPredicted RBP17.11■□□□□ 0.33
LTA-213ENST00000418386 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
LTA-213ENST00000418386 INTS5Q6P9B9 1019 aaKnown RBP17.11■□□□□ 0.33
LTA-213ENST00000418386 KSR2Q6VAB6 950 aa17.11■□□□□ 0.33
LTA-213ENST00000418386 COPS6Q7L5N1 327 aa17.11■□□□□ 0.33
LTA-213ENST00000418386 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
LTA-213ENST00000418386 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
LTA-213ENST00000418386 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
LTA-213ENST00000418386 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
LTA-213ENST00000418386 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
LTA-213ENST00000418386 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
LTA-213ENST00000418386 HMGB2P26583 209 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms