RNA–Protein interactions for RNA: ENST00000417493.1

SNRNP25-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-204ENST00000417493 PARP3Q9Y6F1 533 aa14.41□□□□□ -0.1
SNRNP25-204ENST00000417493 USP42Q9H9J4 1324 aaKnown RBP14.41□□□□□ -0.1
SNRNP25-204ENST00000417493 COL15A1P39059 1388 aa14.4□□□□□ -0.1
SNRNP25-204ENST00000417493 MMP10P09238 476 aa14.4□□□□□ -0.1
SNRNP25-204ENST00000417493 RIPK4P57078 832 aa14.4□□□□□ -0.1
SNRNP25-204ENST00000417493 AMIGO3Q86WK7 504 aa14.4□□□□□ -0.1
SNRNP25-204ENST00000417493 RUNDC1Q96C34 613 aa14.4□□□□□ -0.1
SNRNP25-204ENST00000417493 SOS1Q07889 1333 aaPredicted RBP14.4□□□□□ -0.1
SNRNP25-204ENST00000417493 GYS1P13807 737 aa14.39□□□□□ -0.11
SNRNP25-204ENST00000417493 GPR162Q16538 588 aa14.39□□□□□ -0.11
SNRNP25-204ENST00000417493 BABAM1Q9NWV8 329 aa14.39□□□□□ -0.11
SNRNP25-204ENST00000417493 KDM3BQ7LBC6 1761 aa14.39□□□□□ -0.11
SNRNP25-204ENST00000417493 LAMB4A4D0S4 1761 aa14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 GRIN3BO60391 1043 aa14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 IL6STP40189 918 aaPredicted RBP14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 DCTN1Q14203 1278 aa14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 NARFQ9UHQ1 456 aa14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 ZBTB1Q9Y2K1 713 aa14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
SNRNP25-204ENST00000417493 SMIM5Q71RC9 77 aa14.37□□□□□ -0.11
SNRNP25-204ENST00000417493 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
SNRNP25-204ENST00000417493 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
SNRNP25-204ENST00000417493 EIF5P55010 431 aaKnown RBP14.35□□□□□ -0.11
SNRNP25-204ENST00000417493 TGFB2P61812 414 aa14.35□□□□□ -0.11
SNRNP25-204ENST00000417493 USPL1Q5W0Q7 1092 aa14.35□□□□□ -0.11
SNRNP25-204ENST00000417493 ADAMTS8Q9UP79 889 aa14.35□□□□□ -0.11
SNRNP25-204ENST00000417493 ZNF330Q9Y3S2 320 aaPredicted RBP14.35□□□□□ -0.11
SNRNP25-204ENST00000417493 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
SNRNP25-204ENST00000417493 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
SNRNP25-204ENST00000417493 ZNF652Q9Y2D9 606 aa14.34□□□□□ -0.11
SNRNP25-204ENST00000417493 RGL2O15211 777 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 KCNQ3O43525 872 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 YY1P25490 414 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 FKBP8Q14318 412 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 NLGN2Q8NFZ4 835 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 SCN7AQ01118 1682 aa14.33□□□□□ -0.12
SNRNP25-204ENST00000417493 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
SNRNP25-204ENST00000417493 C10orf71Q711Q0 1435 aa14.32□□□□□ -0.12
SNRNP25-204ENST00000417493 AFDNP55196 1824 aaKnown RBP14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 A1BGP04217 495 aa14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 TM4SF1P30408 202 aa14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 EIF4A1P60842 406 aaKnown RBP14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 CLEC4GQ6UXB4 293 aa14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 DZIP3Q86Y13 1208 aaKnown RBP14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 ERBB4Q15303 1308 aa14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 BCORQ6W2J9 1755 aa14.31□□□□□ -0.12
SNRNP25-204ENST00000417493 N4BP2Q86UW6 1770 aaPredicted RBP14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 NPHP1O15259 732 aa14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 GIGYF1O75420 1035 aaPredicted RBP14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 THUMPD2Q9BTF0 503 aaKnown RBP14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 CHMP4AQ9BY43 222 aa14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 MRS2Q9HD23 443 aa14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 MIS18AQ9NYP9 233 aa14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 PDZRN3Q9UPQ7 1066 aa14.3□□□□□ -0.12
SNRNP25-204ENST00000417493 POLRMTO00411 1230 aaKnown RBP14.29□□□□□ -0.12
SNRNP25-204ENST00000417493 SETDB2Q96T68 719 aa14.29□□□□□ -0.12
SNRNP25-204ENST00000417493 TBC1D2BQ9UPU7 963 aa14.29□□□□□ -0.12
SNRNP25-204ENST00000417493 RRP7AQ9Y3A4 280 aaKnown RBP14.29□□□□□ -0.12
SNRNP25-204ENST00000417493 CARMIL3Q8ND23 1372 aa14.29□□□□□ -0.12
SNRNP25-204ENST00000417493 NFIXQ14938 502 aa14.28□□□□□ -0.12
SNRNP25-204ENST00000417493 NRXN2Q9P2S2 1712 aa14.28□□□□□ -0.12
SNRNP25-204ENST00000417493 BRCA1P38398 1863 aaKnown RBP14.27□□□□□ -0.12
SNRNP25-204ENST00000417493 ARFGEF1Q9Y6D6 1849 aa14.27□□□□□ -0.12
SNRNP25-204ENST00000417493 SERPINB2P05120 415 aa14.27□□□□□ -0.13
SNRNP25-204ENST00000417493 DDR1Q08345 913 aa14.27□□□□□ -0.13
SNRNP25-204ENST00000417493 KIF6Q6ZMV9 814 aa14.27□□□□□ -0.13
SNRNP25-204ENST00000417493 LAS1LQ9Y4W2 734 aaKnown RBP14.27□□□□□ -0.13
SNRNP25-204ENST00000417493 PXDNLA1KZ92 1463 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 CHL1O00533 1208 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 APAF1O14727 1248 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 CAMTA2O94983 1202 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 HOXB7P09629 217 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 GNAI1P63096 354 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 ST5P78524 1137 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 BICDL1Q6ZP65 573 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 PIM2Q9P1W9 311 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 NUP98P52948 1817 aa14.26□□□□□ -0.13
SNRNP25-204ENST00000417493 KIAA1551Q9HCM1 1747 aa14.25□□□□□ -0.13
SNRNP25-204ENST00000417493 PRAMEF22A3QJZ6 481 aa14.25□□□□□ -0.13
SNRNP25-204ENST00000417493 PDE6BP35913 854 aa14.25□□□□□ -0.13
SNRNP25-204ENST00000417493 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
SNRNP25-204ENST00000417493 BCL2L12Q9HB09 334 aa14.25□□□□□ -0.13
SNRNP25-204ENST00000417493 A0A0G2JLW4 131 aa14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 ERVV-1B6SEH8 477 aa14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 YBX3P16989 372 aaKnown RBP eCLIP14.24□□□□□ -0.139e-7■□□□□ 9.3
SNRNP25-204ENST00000417493 TBC1D9BQ66K14 1250 aa14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 CNBD1Q8NA66 436 aa14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 GOLGB1Q14789 3259 aaKnown RBP14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 DLEC1Q9Y238 1755 aa14.24□□□□□ -0.13
SNRNP25-204ENST00000417493 NBPF26B4DH59 902 aa14.23□□□□□ -0.13
SNRNP25-204ENST00000417493 H0YIN7 160 aa14.23□□□□□ -0.13
SNRNP25-204ENST00000417493 DPEP1P16444 411 aa14.23□□□□□ -0.13
SNRNP25-204ENST00000417493 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms